Publications by authors named "Jennifer L Jennings"

29Publications

Targeted Identification of Protein Interactions in Eukaryotic mRNA Translation.

Proteomics 2020 04 3;20(7):e1900177. Epub 2020 Mar 3.

Department of Bioinformatics, Vanderbilt University School of Medicine, Nashville, TN, 37232, USA.

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http://dx.doi.org/10.1002/pmic.201900177DOI Listing
April 2020

A novel algorithm for validating peptide identification from a shotgun proteomics search engine.

J Proteome Res 2013 Mar 12;12(3):1108-19. Epub 2013 Feb 12.

Department of Pathology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232, United States.

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http://dx.doi.org/10.1021/pr300631tDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3608465PMC
March 2013

Social and behavioral skills and the gender gap in early educational achievement.

Soc Sci Res 2012 Jan 14;41(1):1-15. Epub 2011 Sep 14.

University of Wisconsin-Madison, United States.

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http://dx.doi.org/10.1016/j.ssresearch.2011.09.001DOI Listing
January 2012

Assessing the components of the eIF3 complex and their phosphorylation status.

J Proteome Res 2011 Apr 2;10(4):1481-94. Epub 2011 Mar 2.

Department of Biochemisty, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-2363, United States.

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http://pubs.acs.org/doi/abs/10.1021/pr100877m
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http://dx.doi.org/10.1021/pr100877mDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3446855PMC
April 2011

Campylobacter jejuni is associated with, but not sufficient to cause vibrionic hepatitis in chickens.

Vet Microbiol 2011 Apr 9;149(1-2):193-9. Epub 2010 Nov 9.

School of Clinical Veterinary Science, Langford, Bristol BS40 5DU, United Kingdom.

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http://dx.doi.org/10.1016/j.vetmic.2010.11.005DOI Listing
April 2011

International network of cancer genome projects.

Authors:
Thomas J Hudson Warwick Anderson Axel Artez Anna D Barker Cindy Bell Rosa R Bernabé M K Bhan Fabien Calvo Iiro Eerola Daniela S Gerhard Alan Guttmacher Mark Guyer Fiona M Hemsley Jennifer L Jennings David Kerr Peter Klatt Patrik Kolar Jun Kusada David P Lane Frank Laplace Lu Youyong Gerd Nettekoven Brad Ozenberger Jane Peterson T S Rao Jacques Remacle Alan J Schafer Tatsuhiro Shibata Michael R Stratton Joseph G Vockley Koichi Watanabe Huanming Yang Matthew M F Yuen Bartha M Knoppers Martin Bobrow Anne Cambon-Thomsen Lynn G Dressler Stephanie O M Dyke Yann Joly Kazuto Kato Karen L Kennedy Pilar Nicolás Michael J Parker Emmanuelle Rial-Sebbag Carlos M Romeo-Casabona Kenna M Shaw Susan Wallace Georgia L Wiesner Nikolajs Zeps Peter Lichter Andrew V Biankin Christian Chabannon Lynda Chin Bruno Clément Enrique de Alava Françoise Degos Martin L Ferguson Peter Geary D Neil Hayes Thomas J Hudson Amber L Johns Arek Kasprzyk Hidewaki Nakagawa Robert Penny Miguel A Piris Rajiv Sarin Aldo Scarpa Tatsuhiro Shibata Marc van de Vijver P Andrew Futreal Hiroyuki Aburatani Mónica Bayés David D L Botwell Peter J Campbell Xavier Estivill Daniela S Gerhard Sean M Grimmond Ivo Gut Martin Hirst Carlos López-Otín Partha Majumder Marco Marra John D McPherson Hidewaki Nakagawa Zemin Ning Xose S Puente Yijun Ruan Tatsuhiro Shibata Michael R Stratton Hendrik G Stunnenberg Harold Swerdlow Victor E Velculescu Richard K Wilson Hong H Xue Liu Yang Paul T Spellman Gary D Bader Paul C Boutros Peter J Campbell Paul Flicek Gad Getz Roderic Guigó Guangwu Guo David Haussler Simon Heath Tim J Hubbard Tao Jiang Steven M Jones Qibin Li Nuria López-Bigas Ruibang Luo Lakshmi Muthuswamy B F Francis Ouellette John V Pearson Xose S Puente Victor Quesada Benjamin J Raphael Chris Sander Tatsuhiro Shibata Terence P Speed Lincoln D Stein Joshua M Stuart Jon W Teague Yasushi Totoki Tatsuhiko Tsunoda Alfonso Valencia David A Wheeler Honglong Wu Shancen Zhao Guangyu Zhou Lincoln D Stein Roderic Guigó Tim J Hubbard Yann Joly Steven M Jones Arek Kasprzyk Mark Lathrop Nuria López-Bigas B F Francis Ouellette Paul T Spellman Jon W Teague Gilles Thomas Alfonso Valencia Teruhiko Yoshida Karen L Kennedy Myles Axton Stephanie O M Dyke P Andrew Futreal Daniela S Gerhard Chris Gunter Mark Guyer Thomas J Hudson John D McPherson Linda J Miller Brad Ozenberger Kenna M Shaw Arek Kasprzyk Lincoln D Stein Junjun Zhang Syed A Haider Jianxin Wang Christina K Yung Anthony Cros Anthony Cross Yong Liang Saravanamuttu Gnaneshan Jonathan Guberman Jack Hsu Martin Bobrow Don R C Chalmers Karl W Hasel Yann Joly Terry S H Kaan Karen L Kennedy Bartha M Knoppers William W Lowrance Tohru Masui Pilar Nicolás Emmanuelle Rial-Sebbag Laura Lyman Rodriguez Catherine Vergely Teruhiko Yoshida Sean M Grimmond Andrew V Biankin David D L Bowtell Nicole Cloonan Anna deFazio James R Eshleman Dariush Etemadmoghadam Brooke B Gardiner Brooke A Gardiner James G Kench Aldo Scarpa Robert L Sutherland Margaret A Tempero Nicola J Waddell Peter J Wilson John D McPherson Steve Gallinger Ming-Sound Tsao Patricia A Shaw Gloria M Petersen Debabrata Mukhopadhyay Lynda Chin Ronald A DePinho Sarah Thayer Lakshmi Muthuswamy Kamran Shazand Timothy Beck Michelle Sam Lee Timms Vanessa Ballin Youyong Lu Jiafu Ji Xiuqing Zhang Feng Chen Xueda Hu Guangyu Zhou Qi Yang Geng Tian Lianhai Zhang Xiaofang Xing Xianghong Li Zhenggang Zhu Yingyan Yu Jun Yu Huanming Yang Mark Lathrop Jörg Tost Paul Brennan Ivana Holcatova David Zaridze Alvis Brazma Lars Egevard Egor Prokhortchouk Rosamonde Elizabeth Banks Mathias Uhlén Anne Cambon-Thomsen Juris Viksna Fredrik Ponten Konstantin Skryabin Michael R Stratton P Andrew Futreal Ewan Birney Ake Borg Anne-Lise Børresen-Dale Carlos Caldas John A Foekens Sancha Martin Jorge S Reis-Filho Andrea L Richardson Christos Sotiriou Hendrik G Stunnenberg Giles Thoms Marc van de Vijver Laura van't Veer Fabien Calvo Daniel Birnbaum Hélène Blanche Pascal Boucher Sandrine Boyault Christian Chabannon Ivo Gut Jocelyne D Masson-Jacquemier Mark Lathrop Iris Pauporté Xavier Pivot Anne Vincent-Salomon Eric Tabone Charles Theillet Gilles Thomas Jörg Tost Isabelle Treilleux Fabien Calvo Paulette Bioulac-Sage Bruno Clément Thomas Decaens Françoise Degos Dominique Franco Ivo Gut Marta Gut Simon Heath Mark Lathrop Didier Samuel Gilles Thomas Jessica Zucman-Rossi Peter Lichter Roland Eils Benedikt Brors Jan O Korbel Andrey Korshunov Pablo Landgraf Hans Lehrach Stefan Pfister Bernhard Radlwimmer Guido Reifenberger Michael D Taylor Christof von Kalle Partha P Majumder Rajiv Sarin T S Rao M K Bhan Aldo Scarpa Paolo Pederzoli Rita A Lawlor Massimo Delledonne Alberto Bardelli Andrew V Biankin Sean M Grimmond Thomas Gress David Klimstra Giuseppe Zamboni Tatsuhiro Shibata Yusuke Nakamura Hidewaki Nakagawa Jun Kusada Tatsuhiko Tsunoda Satoru Miyano Hiroyuki Aburatani Kazuto Kato Akihiro Fujimoto Teruhiko Yoshida Elias Campo Carlos López-Otín Xavier Estivill Roderic Guigó Silvia de Sanjosé Miguel A Piris Emili Montserrat Marcos González-Díaz Xose S Puente Pedro Jares Alfonso Valencia Heinz Himmelbauer Heinz Himmelbaue Victor Quesada Silvia Bea Michael R Stratton P Andrew Futreal Peter J Campbell Anne Vincent-Salomon Andrea L Richardson Jorge S Reis-Filho Marc van de Vijver Gilles Thomas Jocelyne D Masson-Jacquemier Samuel Aparicio Ake Borg Anne-Lise Børresen-Dale Carlos Caldas John A Foekens Hendrik G Stunnenberg Laura van't Veer Douglas F Easton Paul T Spellman Sancha Martin Anna D Barker Lynda Chin Francis S Collins Carolyn C Compton Martin L Ferguson Daniela S Gerhard Gad Getz Chris Gunter Alan Guttmacher Mark Guyer D Neil Hayes Eric S Lander Brad Ozenberger Robert Penny Jane Peterson Chris Sander Kenna M Shaw Terence P Speed Paul T Spellman Joseph G Vockley David A Wheeler Richard K Wilson Thomas J Hudson Lynda Chin Bartha M Knoppers Eric S Lander Peter Lichter Lincoln D Stein Michael R Stratton Warwick Anderson Anna D Barker Cindy Bell Martin Bobrow Wylie Burke Francis S Collins Carolyn C Compton Ronald A DePinho Douglas F Easton P Andrew Futreal Daniela S Gerhard Anthony R Green Mark Guyer Stanley R Hamilton Tim J Hubbard Olli P Kallioniemi Karen L Kennedy Timothy J Ley Edison T Liu Youyong Lu Partha Majumder Marco Marra Brad Ozenberger Jane Peterson Alan J Schafer Paul T Spellman Hendrik G Stunnenberg Brandon J Wainwright Richard K Wilson Huanming Yang

Nature 2010 Apr;464(7291):993-8

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http://dx.doi.org/10.1038/nature08987DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2902243PMC
April 2010

Dyggve-Melchior-Clausen syndrome: chondrodysplasia resulting from defects in intracellular vesicle traffic.

Proc Natl Acad Sci U S A 2008 Oct 13;105(42):16171-6. Epub 2008 Oct 13.

Department of Microbiology and Immunology, Vanderbilt University School of Medicine, 1161 21st Ave. South, Nashville, TN 37232-2363, USA.

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http://dx.doi.org/10.1073/pnas.0804259105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2571016PMC
October 2008

A proteomics analysis of yeast Mot1p protein-protein associations: insights into mechanism.

Mol Cell Proteomics 2008 Nov 2;7(11):2090-106. Epub 2008 Jul 2.

Department of Molecular Physiology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-0615, USA.

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M800221-MCP2
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http://dx.doi.org/10.1074/mcp.M800221-MCP200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577210PMC
November 2008

Analysis of protein composition using multidimensional chromatography and mass spectrometry.

Curr Protoc Protein Sci 2004 Feb;Chapter 23:Unit 23.1

Vanderbilt University School of Medicine, Nashville, Tennessee, USA.

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http://dx.doi.org/10.1002/0471140864.ps2301s34DOI Listing
February 2004

A proximal activator of transcription in epithelial-mesenchymal transition.

J Clin Invest 2007 Feb;117(2):482-91

Department of Medicine, Vanderbilt University School of Medicine, D-3100 MCN, Nashville, Tennessee 37232, USA.

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http://www.jci.org/cgi/doi/10.1172/JCI29544
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http://dx.doi.org/10.1172/JCI29544DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1783826PMC
February 2007

Role of Hcn1 and its phosphorylation in fission yeast anaphase-promoting complex/cyclosome function.

J Biol Chem 2006 Oct 1;281(43):32284-93. Epub 2006 Sep 1.

Howard Hughes Medical Institute and the Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1074/jbc.M603867200DOI Listing
October 2006

Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes.

Genes Dev 2006 May;20(10):1294-307

Department of Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232, USA.

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http://dx.doi.org/10.1101/gad.1422006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1472904PMC
May 2006

The novel ATP-binding cassette protein ARB1 is a shuttling factor that stimulates 40S and 60S ribosome biogenesis.

Mol Cell Biol 2005 Nov;25(22):9859-73

Laboratory of Gene Regulation and Development, National Institute of Child Health and Human Development, Bethesda, Maryland 20892, USA.

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http://dx.doi.org/10.1128/MCB.25.22.9859-9873.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1280274PMC
November 2005

Proteomic analysis of human norepinephrine transporter complexes reveals associations with protein phosphatase 2A anchoring subunit and 14-3-3 proteins.

Biochem Biophys Res Commun 2005 Aug;333(3):671-8

Department of Pharmacology, Vanderbilt University School of Medicine, Nashville, TN 37232-8548, USA.

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http://dx.doi.org/10.1016/j.bbrc.2005.05.165DOI Listing
August 2005

Mto2p, a novel fission yeast protein required for cytoplasmic microtubule organization and anchoring of the cytokinetic actin ring.

Mol Biol Cell 2005 Jun 30;16(6):3052-63. Epub 2005 Mar 30.

Department of Cell and Developmental Biology and Howard Hughes Medical Institute, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1091/mbc.e04-12-1043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1142447PMC
June 2005

Purifying protein complexes for mass spectrometry: applications to protein translation.

Methods 2005 Mar 12;35(3):274-90. Epub 2005 Jan 12.

Department of Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232-8575, USA.

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http://dx.doi.org/10.1016/j.ymeth.2004.08.019DOI Listing
March 2005

Cluster analysis of mass spectrometry data reveals a novel component of SAGA.

Mol Cell Biol 2004 Aug;24(16):7249-59

Department of Microbiology and Immunology, Vanderbilt University School of Medicine, Nashville, TN 37232-2363, USA.

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http://mcb.asm.org/cgi/doi/10.1128/MCB.24.16.7249-7259.2004
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http://dx.doi.org/10.1128/MCB.24.16.7249-7259.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC479721PMC
August 2004

Tandem affinity purification and identification of protein complex components.

Methods 2004 Jul;33(3):239-44

Howard Hughes Medical Institute and Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1016/j.ymeth.2003.11.019DOI Listing
July 2004

YIH1 is an actin-binding protein that inhibits protein kinase GCN2 and impairs general amino acid control when overexpressed.

J Biol Chem 2004 Jul 4;279(29):29952-62. Epub 2004 May 4.

Laboratory of Gene Regulation and Development, NICHD, National Institutes of Health, Bethesda, Maryland 20892-2427, USA.

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http://dx.doi.org/10.1074/jbc.M404009200DOI Listing
July 2004

Sid4p-Cdc11p assembles the septation initiation network and its regulators at the S. pombe SPB.

Curr Biol 2004 Apr;14(7):579-84

Howard Hughes Medical Institute and Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1016/j.cub.2004.03.036DOI Listing
April 2004

Identification and characterization of two novel proteins affecting fission yeast gamma-tubulin complex function.

Mol Biol Cell 2004 May 5;15(5):2287-301. Epub 2004 Mar 5.

Department of Cell and Developmental Biology, Howard Hughes Medical Institute, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1091/mbc.e03-10-0728DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC404023PMC
May 2004

Inhibition of P-TEFb (CDK9/Cyclin T) kinase and RNA polymerase II transcription by the coordinated actions of HEXIM1 and 7SK snRNA.

Mol Cell 2003 Oct;12(4):971-82

Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1016/s1097-2765(03)00388-5DOI Listing
October 2003

Regulation of alternative splicing by SRrp86 and its interacting proteins.

Mol Cell Biol 2003 Nov;23(21):7437-47

Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee 37235, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC207616PMC
http://dx.doi.org/10.1128/mcb.23.21.7437-7447.2003DOI Listing
November 2003

Proteomics analysis identifies new components of the fission and budding yeast anaphase-promoting complexes.

Curr Biol 2002 Dec;12(23):2048-54

Howard Hughes Medical Institute, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1016/s0960-9822(02)01331-3DOI Listing
December 2002