Jennifer F Biddle

Jennifer F Biddle

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Jennifer F Biddle

Jennifer F Biddle

Publications by authors named "Jennifer F Biddle"

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Mercury geochemistry and microbial diversity in meromictic Glacier Lake, Jamesville, NY.

Environ Microbiol Rep 2020 Apr 20;12(2):195-202. Epub 2020 Feb 20.

School of Marine Science and Policy, University of Delaware, Lewes, DE, USA.

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http://dx.doi.org/10.1111/1758-2229.12823DOI Listing
April 2020

Metabolic potentials of archaeal lineages resolved from metagenomes of deep Costa Rica sediments.

ISME J 2020 Feb 17. Epub 2020 Feb 17.

School of Marine Science and Policy, University of Delaware, Lewes, DE, 19968, USA.

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http://dx.doi.org/10.1038/s41396-020-0615-5DOI Listing
February 2020

Cytosine Methylation Within Marine Sediment Microbial Communities: Potential Epigenetic Adaptation to the Environment.

Front Microbiol 2019 11;10:1291. Epub 2019 Jun 11.

School of Marine Science and Policy, University of Delaware, Lewes, DE, United States.

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http://dx.doi.org/10.3389/fmicb.2019.01291DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6579885PMC
June 2019

An Ionic Limit to Life in the Deep Subsurface.

Front Microbiol 2019 12;10:426. Epub 2019 Mar 12.

UK Centre for Astrobiology, School of Physics and Astronomy, University of Edinburgh, Edinburgh, United Kingdom.

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http://dx.doi.org/10.3389/fmicb.2019.00426DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6422919PMC
March 2019

Discerning autotrophy, mixotrophy and heterotrophy in marine TACK archaea from the North Atlantic.

FEMS Microbiol Ecol 2018 03;94(3)

Department of Marine and Coastal Sciences, Rutgers University, New Brunswick, NJ 08901-8521, USA.

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http://dx.doi.org/10.1093/femsec/fiy014DOI Listing
March 2018

The metabolic potential of the single cell genomes obtained from the Challenger Deep, Mariana Trench within the candidate superphylum Parcubacteria (OD1).

Environ Microbiol 2017 07 22;19(7):2769-2784. Epub 2017 Jun 22.

Marine Biology Research Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, 92093, USA.

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http://dx.doi.org/10.1111/1462-2920.13789DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5524542PMC
July 2017

Using directed evolution to improve hydrogen production in chimeric hydrogenases from Clostridia species.

Enzyme Microb Technol 2016 Nov 6;93-94:132-141. Epub 2016 Aug 6.

H(2)OPE Biofuels LLC, Greenwood Village, CO, USA; School of Marine Science and Policy, University of Delaware, Lewes, DE, USA.

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http://dx.doi.org/10.1016/j.enzmictec.2016.07.011DOI Listing
November 2016

Transcriptional analysis of sulfate reducing and chemolithoautotrophic sulfur oxidizing bacteria in the deep subseafloor.

Environ Microbiol Rep 2016 08 8;8(4):452-60. Epub 2016 Apr 8.

College of Earth, Ocean and Environment, University of Delaware, Lewes, DE, 19958, USA.

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http://dx.doi.org/10.1111/1758-2229.12387DOI Listing
August 2016

Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria.

Front Microbiol 2016 10;7:678. Epub 2016 May 10.

College of Earth, Ocean and Environment, University of Delaware Lewes, DE, USA.

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http://dx.doi.org/10.3389/fmicb.2016.00678DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4861733PMC
May 2016

Cultivation-dependent and cultivation-independent characterization of hydrocarbon-degrading bacteria in Guaymas Basin sediments.

Front Microbiol 2015 7;6:695. Epub 2015 Jul 7.

Department of Environmental Sciences and Engineering, Gillings School of Global Public Health, University of North Carolina at Chapel Hill, Chapel Hill, NC USA.

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http://journal.frontiersin.org/Article/10.3389/fmicb.2015.00
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http://dx.doi.org/10.3389/fmicb.2015.00695DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493657PMC
July 2015

Global dispersion and local diversification of the methane seep microbiome.

Proc Natl Acad Sci U S A 2015 Mar 16;112(13):4015-20. Epub 2015 Mar 16.

HGF MPG Group for Deep Sea Ecology and Technology and.

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http://dx.doi.org/10.1073/pnas.1421865112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4386351PMC
March 2015

Phylogenetic diversity of a microbialite reef in a cold alkaline freshwater lake.

Can J Microbiol 2014 Jun 29;60(6):391-8. Epub 2014 Apr 29.

a Institute for Applied Ecology New Zealand, School of Applied Sciences, Auckland University of Technology, Auckland, New Zealand.

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http://dx.doi.org/10.1139/cjm-2014-0024DOI Listing
June 2014

Sulfide oxidation, nitrate respiration, carbon acquisition, and electron transport pathways suggested by the draft genome of a single orange Guaymas Basin Beggiatoa (Cand. Maribeggiatoa) sp. filament.

Mar Genomics 2013 Sep 3;11:53-65. Epub 2013 Sep 3.

Department of Marine Sciences, University of North Carolina - Chapel Hill, Chapel Hill, NC 27599, USA. Electronic address:

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http://dx.doi.org/10.1016/j.margen.2013.08.001DOI Listing
September 2013

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces.

PLoS One 2013 13;8(2):e56335. Epub 2013 Feb 13.

Department of Geology and Geophysics, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0056335PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3572030PMC
August 2013

Mobile elements in a single-filament orange Guaymas Basin Beggiatoa ("Candidatus Maribeggiatoa") sp. draft genome: evidence for genetic exchange with cyanobacteria.

Appl Environ Microbiol 2013 Jul 19;79(13):3974-85. Epub 2013 Apr 19.

Department of Marine Sciences, University of North Carolina, Chapel Hill, Chapel Hill, NC, USA.

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http://dx.doi.org/10.1128/AEM.03821-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3697557PMC
July 2013

Gene expression in the deep biosphere.

Nature 2013 Jul 12;499(7457):205-8. Epub 2013 Jun 12.

Department of Geology and Geophysics, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, USA.

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http://dx.doi.org/10.1038/nature12230DOI Listing
July 2013

Deep subsurface microbiology: a guide to the research topic papers.

Front Microbiol 2013 16;4:122. Epub 2013 May 16.

Department of Marine Sciences, University of North Carolina at Chapel Hill Chapel Hill, NC, USA.

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http://dx.doi.org/10.3389/fmicb.2013.00122DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3655269PMC
May 2013

Microbial eukaryotes: extending observations north.

Front Microbiol 2013 5;4:10. Epub 2013 Feb 5.

College of Earth, Ocean and Environment, University of Delaware , Lewes, DE, USA.

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http://dx.doi.org/10.3389/fmicb.2013.00010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3563976PMC
February 2013

Prospects for the study of evolution in the deep biosphere.

Front Microbiol 2011 24;2:285. Epub 2012 Jan 24.

College of Earth, Ocean and the Environment, University of Delaware Lewes, DE, USA.

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http://dx.doi.org/10.3389/fmicb.2011.00285DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3265032PMC
October 2012

Novel Degenerate PCR Method for Whole-Genome Amplification Applied to Peru Margin (ODP Leg 201) Subsurface Samples.

Front Microbiol 2012 23;3:17. Epub 2012 Jan 23.

Department of Geosciences, Penn State Astrobiology Research Center, Pennsylvania State University University Park, PA, USA.

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http://dx.doi.org/10.3389/fmicb.2012.00017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3263435PMC
October 2012

Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments.

ISME J 2012 Oct 3;6(10):1949-65. Epub 2012 May 3.

Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Bremen, Germany.

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http://dx.doi.org/10.1038/ismej.2012.37DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3449235PMC
October 2012

Metagenomics of the subsurface Brazos-Trinity Basin (IODP site 1320): comparison with other sediment and pyrosequenced metagenomes.

ISME J 2011 Jun 6;5(6):1038-47. Epub 2011 Jan 6.

Penn State Astrobiology Research Center, Pennsylvania State University, University Park, USA.

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http://dx.doi.org/10.1038/ismej.2010.199DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3131849PMC
June 2011

Marine subsurface eukaryotes: the fungal majority.

Environ Microbiol 2011 Jan;13(1):172-183

Departments of Geology and GeophysicsBiology, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USACollege of Earth, Ocean and the Environment, University of Delaware, Lewes, DE 19958, USADepartment of Marine Sciences, University of North Carolina, Chapel Hill, NC 27599, USA.

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http://dx.doi.org/10.1111/j.1462-2920.2010.02318.xDOI Listing
January 2011

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep.

PLoS One 2010 Jan 15;5(1):e8738. Epub 2010 Jan 15.

Department of Marine Sciences, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0008738PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2806916PMC
January 2010

Metagenomic signatures of the Peru Margin subseafloor biosphere show a genetically distinct environment.

Proc Natl Acad Sci U S A 2008 Jul 23;105(30):10583-8. Epub 2008 Jul 23.

Astrobiology Research Center, Pennsylvania State University, University Park, PA 16802, USA.

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http://dx.doi.org/10.1073/pnas.0709942105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2492506PMC
July 2008