Publications by authors named "Jeff Nivala"

13Publications

Rapid and robust assembly and decoding of molecular tags with DNA-based nanopore signatures.

Nat Commun 2020 11 3;11(1):5454. Epub 2020 Nov 3.

Paul G. Allen School of Computer Science & Engineering, University of Washington, Seattle, WA, 98195, USA.

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November 2020

Unfolding and Translocation of Proteins Through an Alpha-Hemolysin Nanopore by ClpXP.

Methods Mol Biol 2021 ;2186:145-155

UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA.

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January 2021

Follow the barcoded microbes.

Authors:
Jeff Nivala

Science 2020 06;368(6495):1058-1059

Molecular Information Systems Lab, Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA.

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June 2020

Molecular digital data storage using DNA.

Nat Rev Genet 2019 08;20(8):456-466

Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA.

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August 2019

Spontaneous CRISPR loci generation in vivo by non-canonical spacer integration.

Nat Microbiol 2018 03 29;3(3):310-318. Epub 2018 Jan 29.

Department of Genetics, Harvard Medical School, Boston, MA, USA.

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March 2018

CRISPR-Cas encoding of a digital movie into the genomes of a population of living bacteria.

Nature 2017 07 12;547(7663):345-349. Epub 2017 Jul 12.

Department of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, Massachusetts 02115, USA.

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July 2017

Molecular recordings by directed CRISPR spacer acquisition.

Science 2016 Jul 9;353(6298):aaf1175. Epub 2016 Jun 9.

Department of Genetics, Harvard Medical School, 77 Avenue Louis Pasteur, Boston, MA 02115, USA. Wyss Institute for Biologically Inspired Engineering, Harvard University, Cambridge, MA 02138, USA.

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July 2016

Discrimination among protein variants using an unfoldase-coupled nanopore.

ACS Nano 2014 Dec 8;8(12):12365-75. Epub 2014 Dec 8.

Nanopore Group, Department of Biomolecular Engineering, University of California , Santa Cruz, California 95064, United States.

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December 2014

Unfoldase-mediated protein translocation through an α-hemolysin nanopore.

Nat Biotechnol 2013 Mar 3;31(3):247-50. Epub 2013 Feb 3.

Nanopore Group, Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, USA.

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March 2013

Reversible thrombin detection by aptamer functionalized STING sensors.

Biosens Bioelectron 2011 Jul 12;26(11):4503-7. Epub 2011 May 12.

Department of Biomolecular Engineering, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95064, USA.

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July 2011