Jeanette E Eckel-Passow

Jeanette E Eckel-Passow

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Jeanette E Eckel-Passow

Jeanette E Eckel-Passow

Publications by authors named "Jeanette E Eckel-Passow"

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CpGtools: A Python Package for DNA Methylation Analysis.

Bioinformatics 2019 Dec 6. Epub 2019 Dec 6.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1093/bioinformatics/btz916DOI Listing
December 2019

The influence of obesity-related factors in the etiology of renal cell carcinoma-A mendelian randomization study.

Authors:
Mattias Johansson Robert Carreras-Torres Ghislaine Scelo Mark P Purdue Daniela Mariosa David C Muller Nicolas J Timpson Philip C Haycock Kevin M Brown Zhaoming Wang Yuanqing Ye Jonathan N Hofmann Matthieu Foll Valerie Gaborieau Mitchell J Machiela Leandro M Colli Peng Li Jean-Guillaume Garnier Helene Blanche Anne Boland Laurie Burdette Egor Prokhortchouk Konstantin G Skryabin Meredith Yeager Sanja Radojevic-Skodric Simona Ognjanovic Lenka Foretova Ivana Holcatova Vladimir Janout Dana Mates Anush Mukeriya Stefan Rascu David Zaridze Vladimir Bencko Cezary Cybulski Eleonora Fabianova Viorel Jinga Jolanta Lissowska Jan Lubinski Marie Navratilova Peter Rudnai Simone Benhamou Geraldine Cancel-Tassin Olivier Cussenot Elisabete Weiderpass Börje Ljungberg Raviprakash Tumkur Sitaram Christel Häggström Fiona Bruinsma Susan J Jordan Gianluca Severi Ingrid Winship Kristian Hveem Lars J Vatten Tony Fletcher Susanna C Larsson Alicja Wolk Rosamonde E Banks Peter J Selby Douglas F Easton Gabriella Andreotti Laura E Beane Freeman Stella Koutros Satu Männistö Stephanie Weinstein Peter E Clark Todd L Edwards Loren Lipworth Susan M Gapstur Victoria L Stevens Hallie Carol Matthew L Freedman Mark M Pomerantz Eunyoung Cho Kathryn M Wilson J Michael Gaziano Howard D Sesso Neal D Freedman Alexander S Parker Jeanette E Eckel-Passow Wen-Yi Huang Richard J Kahnoski Brian R Lane Sabrina L Noyes David Petillo Bin Tean Teh Ulrike Peters Emily White Garnet L Anderson Lisa Johnson Juhua Luo Julie Buring I-Min Lee Wong-Ho Chow Lee E Moore Timothy Eisen Marc Henrion James Larkin Poulami Barman Bradley C Leibovich Toni K Choueiri G Mark Lathrop Jean-Francois Deleuze Marc Gunter James D McKay Xifeng Wu Richard S Houlston Stephen J Chanock Caroline Relton J Brent Richards Richard M Martin George Davey Smith Paul Brennan

PLoS Med 2019 01 3;16(1):e1002724. Epub 2019 Jan 3.

International Agency for Research on Cancer (IARC), Lyon, France.

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http://dx.doi.org/10.1371/journal.pmed.1002724DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6317776PMC
January 2019

Alcohol consumption, variability in alcohol dehydrogenase genes and risk of renal cell carcinoma.

Int J Cancer 2018 02 28;142(4):747-756. Epub 2017 Oct 28.

Department of Health Sciences Research, 4500 San Pablo Road, Jacksonville, FL.

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http://dx.doi.org/10.1002/ijc.31103DOI Listing
February 2018

Multicenter Validation of Enhancer of Zeste Homolog 2 Expression as an Independent Prognostic Marker in Localized Clear Cell Renal Cell Carcinoma.

J Clin Oncol 2017 Nov 4;35(32):3706-3713. Epub 2017 Oct 4.

Thai Huu Ho, Mayo Clinic, Phoenix, AZ; Jeanette E. Eckel-Passow, John C. Cheville, and R. Houston Thompson, Mayo Clinic, Rochester, MN; Payal Kapur, Alana Christie, Vandana Panwar, and James Brugarolas, University of Texas Southwestern Medical Center; Payal Kapur, Farrah Homayoun, and James Brugarolas, Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX; and Richard W. Joseph, Daniel J. Serie, and Alexander S. Parker, Mayo Clinic, Jacksonville, FL.

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http://dx.doi.org/10.1200/JCO.2017.73.3238DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5678341PMC
November 2017

Coffee consumption and risk of renal cell carcinoma.

Cancer Causes Control 2017 Aug 24;28(8):857-866. Epub 2017 Jun 24.

Department of Health Sciences Research, Mayo Clinic, 4500 San Pablo Road, Jacksonville, FL, 32224, USA.

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http://dx.doi.org/10.1007/s10552-017-0913-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5782814PMC
August 2017

Genome-wide association study identifies multiple risk loci for renal cell carcinoma.

Authors:
Ghislaine Scelo Mark P Purdue Kevin M Brown Mattias Johansson Zhaoming Wang Jeanette E Eckel-Passow Yuanqing Ye Jonathan N Hofmann Jiyeon Choi Matthieu Foll Valerie Gaborieau Mitchell J Machiela Leandro M Colli Peng Li Joshua N Sampson Behnoush Abedi-Ardekani Celine Besse Helene Blanche Anne Boland Laurie Burdette Amelie Chabrier Geoffroy Durand Florence Le Calvez-Kelm Egor Prokhortchouk Nivonirina Robinot Konstantin G Skryabin Magdalena B Wozniak Meredith Yeager Gordana Basta-Jovanovic Zoran Dzamic Lenka Foretova Ivana Holcatova Vladimir Janout Dana Mates Anush Mukeriya Stefan Rascu David Zaridze Vladimir Bencko Cezary Cybulski Eleonora Fabianova Viorel Jinga Jolanta Lissowska Jan Lubinski Marie Navratilova Peter Rudnai Neonila Szeszenia-Dabrowska Simone Benhamou Geraldine Cancel-Tassin Olivier Cussenot Laura Baglietto Heiner Boeing Kay-Tee Khaw Elisabete Weiderpass Borje Ljungberg Raviprakash T Sitaram Fiona Bruinsma Susan J Jordan Gianluca Severi Ingrid Winship Kristian Hveem Lars J Vatten Tony Fletcher Kvetoslava Koppova Susanna C Larsson Alicja Wolk Rosamonde E Banks Peter J Selby Douglas F Easton Paul Pharoah Gabriella Andreotti Laura E Beane Freeman Stella Koutros Demetrius Albanes Satu Männistö Stephanie Weinstein Peter E Clark Todd L Edwards Loren Lipworth Susan M Gapstur Victoria L Stevens Hallie Carol Matthew L Freedman Mark M Pomerantz Eunyoung Cho Peter Kraft Mark A Preston Kathryn M Wilson J Michael Gaziano Howard D Sesso Amanda Black Neal D Freedman Wen-Yi Huang John G Anema Richard J Kahnoski Brian R Lane Sabrina L Noyes David Petillo Bin Tean Teh Ulrike Peters Emily White Garnet L Anderson Lisa Johnson Juhua Luo Julie Buring I-Min Lee Wong-Ho Chow Lee E Moore Christopher Wood Timothy Eisen Marc Henrion James Larkin Poulami Barman Bradley C Leibovich Toni K Choueiri G Mark Lathrop Nathaniel Rothman Jean-Francois Deleuze James D McKay Alexander S Parker Xifeng Wu Richard S Houlston Paul Brennan Stephen J Chanock

Nat Commun 2017 06 9;8:15724. Epub 2017 Jun 9.

Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Department Health and Human Services, Bethesda, Maryland 20892, USA.

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http://dx.doi.org/10.1038/ncomms15724DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5472706PMC
June 2017

Validation of Gene Expression Signatures to Identify Low-risk Clear-cell Renal Cell Carcinoma Patients at Higher Risk for Disease-related Death.

Eur Urol Focus 2016 Dec 2;2(6):608-615. Epub 2016 Apr 2.

Division of Hematology and Oncology and Cancer Center and Breast Clinic, Mayo Clinic, Jacksonville, FL, USA. Electronic address:

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http://dx.doi.org/10.1016/j.euf.2016.03.008DOI Listing
December 2016

Delineation of MGMT Hypermethylation as a Biomarker for Veliparib-Mediated Temozolomide-Sensitizing Therapy of Glioblastoma.

J Natl Cancer Inst 2016 May 27;108(5). Epub 2015 Nov 27.

Department of Radiation Oncology (SKG, BLC, ACM, KKB, JLP, MAS, LC, GJK, JNS), Division of Medical Oncology (SHK), Molecular Pharmacology and Experimental Therapeutics (FBA, JMR), Division of Biomedical Statistics and Informatics (PAD, JEEP, KVB), and Laboratory Medicine and Pathology (GS, RBJ), Mayo Clinic, Rochester MN; The University of Texas, MD Anderson Cancer Center, Houston, TX (RGV, EPS).

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http://dx.doi.org/10.1093/jnci/djv369DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4862419PMC
May 2016

Statistical considerations on prognostic models for glioma.

Neuro Oncol 2016 05 8;18(5):609-23. Epub 2015 Dec 8.

Department of Neurological Surgery, University of California San Francisco (UCSF), San Francisco, California (A.M.M., M.R.W.); Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, California (A.M.M., M.R.W.); Institute of Human Genetics, University of California San Francisco, San Francisco, California (M.R.W.); Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota (R.B.J.); Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, Minnesota (J.E.E.-P.).

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http://dx.doi.org/10.1093/neuonc/nov255DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4827041PMC
May 2016

Understanding inherited genetic risk of adult glioma - a review.

Neurooncol Pract 2016 Mar 25;3(1):10-16. Epub 2015 Aug 25.

Division of Neuroepidemiology, Department of Neurological Surgery , University of California , San Francisco, 1450 3rd Street, San Francisco, CA 94158 (T.R., A.M.M., K.M.W, S.S.F., J.W., J.K.W., M.R.W.); Department of Laboratory Medicine and Pathology , Mayo Clinic College of Medicine , 200 First Street SW, Rochester, MN 55905 (D.H.L., R.B.J.); Department of Neurology, Mayo Clinic College of Medicine, 200 First Street SW, Rochester, MN 55905 (D.H.L.) ; Department of Epidemiology and Biostatistics , University of California , San Francisco, 1450 3rd Street, San Francisco, CA 94158 (A.M.M., J.W.); Division of Biomedical Statistics and Informatics , Mayo Clinic College of Medicine , 200 First Street SW, Rochester, MN 55905 (J.E.E.-P.); Program in Cancer Genetics, Helen Diller Family Comprehensive Cancer Center , University of California , San Francisco, 1450 3rd Street, San Francisco, CA 94158 (K.M.W., J.W., J.K.W., M.R.W.); Case Comprehensive Cancer Center , Case Western Reserve University School of Medicine , 11100 Euclid Avenue, Cleveland, OH 44106-5065 (J.B.-S., Q.T.O.); Central Brain Tumor Registry of the United States , 244 East Ogden Ave Suite 116, Hinsdale, IL 60521 (J.B.-S., Q.T.O.).

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https://academic.oup.com/nop/article-lookup/doi/10.1093/nop/
Publisher Site
http://dx.doi.org/10.1093/nop/npv026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4774334PMC
March 2016

Measure transcript integrity using RNA-seq data.

BMC Bioinformatics 2016 Feb 3;17:58. Epub 2016 Feb 3.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, 55905, USA.

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http://dx.doi.org/10.1186/s12859-016-0922-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739097PMC
February 2016

Telomere maintenance and the etiology of adult glioma.

Neuro Oncol 2015 Nov 25;17(11):1445-52. Epub 2015 May 25.

Department of Neurological Surgery, University of California-San Francisco, San Francisco, California (K.M.W., J.K.W., A.M.M., M.R.W.); Institute for Human Genetics, University of California-San Francisco, San Francisco, California (J.K.W., M.R.W.); Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota (D.H.L., R.B.J.); Department of Neurology, Mayo Clinic, Rochester, Minnesota (D.H.L.); Department of Epidemiology and Biostatistics, University of California-San Francisco, San Francisco, California (J.L.W., A.M.M.); Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota (J.E.E.-P.).

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http://neuro-oncology.oxfordjournals.org/content/17/11/1445.
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http://neuro-oncology.oxfordjournals.org/lookup/doi/10.1093/
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http://dx.doi.org/10.1093/neuonc/nov082DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4648301PMC
November 2015

A Heritable Missense Polymorphism in CDKN2A Confers Strong Risk of Childhood Acute Lymphoblastic Leukemia and Is Preferentially Selected during Clonal Evolution.

Cancer Res 2015 Nov 2;75(22):4884-94. Epub 2015 Nov 2.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California, San Francisco, San Francisco, California. Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California. Institute for Human Genetics, University of California, San Francisco, San Francisco, California.

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http://cancerres.aacrjournals.org/content/early/2015/11/01/0
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http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
Publisher Site
http://dx.doi.org/10.1158/0008-5472.CAN-15-1105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651745PMC
November 2015

Glioma Groups Based on 1p/19q, IDH, and TERT Promoter Mutations in Tumors.

N Engl J Med 2015 Jun 10;372(26):2499-508. Epub 2015 Jun 10.

From the Departments of Health Sciences Research (J.E.E.-P., P.A.D., H.S., M.L.K.), Laboratory Medicine and Pathology (D.H.L., G.S., A.A.C., T.M.K., C.E.P., A.R.C., C.H., C.G., R.B.J.), Neurology (D.H.L., B.P.O.), and Oncology (J.C.B.), Mayo Clinic, Rochester, MN; the Departments of Neurological Surgery (A.M.M., K.M.W., T.R., I.V.S., H.M.H., L.S.M., S.Z., A.P., M.S.B., S.M.C., M.D.P., J.K.W., M.R.W.), Epidemiology and Biostatistics (A.M.M., P.M.B., J.W., J.K.W., M.R.W.) and Pathology (M.P., R.M., G.F.R., A.P., T.T.) and the Institute of Human Genetics (J.W., J.K.W., M.R.W.), University of California, San Francisco, and the Bioinformatics Core, Gladstone Institutes (A.R.P.) - all in San Francisco; and the Department of Pathology and Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York (J.T.H.).

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http://www.nejm.org/doi/10.1056/NEJMoa1407279
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http://dx.doi.org/10.1056/NEJMoa1407279DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489704PMC
June 2015

Genomic analysis reveals that immune function genes are strongly linked to clinical outcome in the North Central Cancer Treatment Group n9831 Adjuvant Trastuzumab Trial.

J Clin Oncol 2015 Mar 20;33(7):701-8. Epub 2015 Jan 20.

Edith A. Perez, E. Aubrey Thompson, Yan W. Asmann, and Xochiquetzal J. Geiger, Mayo Clinic, Jacksonville, FL; Karla V. Ballman, S. Keith Anderson, Krishna R. Kalari, Jeanette E. Eckel-Passow, Kathleen S. Tenner, Jin Jen, Beiyun Chen, Robert B. Jenkins, and Monica M. Reinholz, Mayo Clinic, Rochester, MN; Amylou C. Dueck, and Ann E. McCullough, Mayo Clinic, Scottsdale, AZ; Jian-Bing Fan, Illumina, San Diego, CA; George W. Sledge, Stanford School of Medicine, Palo Alto, CA; Eric P. Winer, Harvard Medical School, Boston, MA; and Julie R. Gralow, Seattle Cancer Care Alliance, Seattle, WA.

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http://dx.doi.org/10.1200/JCO.2014.57.6298DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4334774PMC
March 2015

Assessing the clinical use of clear cell renal cell carcinoma molecular subtypes identified by RNA expression analysis.

Urol Oncol 2015 Feb 28;33(2):68.e17-23. Epub 2014 Aug 28.

Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL. Electronic address:

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http://dx.doi.org/10.1016/j.urolonc.2014.07.019DOI Listing
February 2015

Genome-wide association study identifies 25 known breast cancer susceptibility loci as risk factors for triple-negative breast cancer.

Authors:
Kristen S Purrington Susan Slager Diana Eccles Drakoulis Yannoukakos Peter A Fasching Penelope Miron Jane Carpenter Jenny Chang-Claude Nicholas G Martin Grant W Montgomery Vessela Kristensen Hoda Anton-Culver Paul Goodfellow William J Tapper Sajjad Rafiq Susan M Gerty Lorraine Durcan Irene Konstantopoulou Florentia Fostira Athanassios Vratimos Paraskevi Apostolou Irene Konstanta Vassiliki Kotoula Sotiris Lakis Meletios A Dimopoulos Dimosthenis Skarlos Dimitrios Pectasides George Fountzilas Matthias W Beckmann Alexander Hein Matthias Ruebner Arif B Ekici Arndt Hartmann Ruediger Schulz-Wendtland Stefan P Renner Wolfgang Janni Brigitte Rack Christoph Scholz Julia Neugebauer Ulrich Andergassen Michael P Lux Lothar Haeberle Christine Clarke Nirmala Pathmanathan Anja Rudolph Dieter Flesch-Janys Stefan Nickels Janet E Olson James N Ingle Curtis Olswold Seth Slettedahl Jeanette E Eckel-Passow S Keith Anderson Daniel W Visscher Victoria L Cafourek Hugues Sicotte Naresh Prodduturi Elisabete Weiderpass Leslie Bernstein Argyrios Ziogas Jennifer Ivanovich Graham G Giles Laura Baglietto Melissa Southey Veli-Matti Kosma Hans-Peter Fischer Malcom W R Reed Simon S Cross Sandra Deming-Halverson Martha Shrubsole Qiuyin Cai Xiao-Ou Shu Mary Daly Joellen Weaver Eric Ross Jennifer Klemp Priyanka Sharma Diana Torres Thomas Rüdiger Heidrun Wölfing Hans-Ulrich Ulmer Asta Försti Thaer Khoury Shicha Kumar Robert Pilarski Charles L Shapiro Dario Greco Päivi Heikkilä Kristiina Aittomäki Carl Blomqvist Astrid Irwanto Jianjun Liu Vernon Shane Pankratz Xianshu Wang Gianluca Severi Arto Mannermaa Douglas Easton Per Hall Hiltrud Brauch Angela Cox Wei Zheng Andrew K Godwin Ute Hamann Christine Ambrosone Amanda Ewart Toland Heli Nevanlinna Celine M Vachon Fergus J Couch

Carcinogenesis 2014 May 9;35(5):1012-9. Epub 2013 Dec 9.

Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1093/carcin/bgt404DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4004200PMC
May 2014

Somatic expression of ENRAGE is associated with obesity status among patients with clear cell renal cell carcinoma.

Carcinogenesis 2014 Apr 28;35(4):822-7. Epub 2013 Dec 28.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1093/carcin/bgt485DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3977147PMC
April 2014

ANKS1B is a smoking-related molecular alteration in clear cell renal cell carcinoma.

BMC Urol 2014 Jan 31;14:14. Epub 2014 Jan 31.

Department of Health Sciences Research, Mayo Clinic, 4500 San Pablo Road, Jacksonville, FL 32224, USA.

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http://dx.doi.org/10.1186/1471-2490-14-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3944917PMC
January 2014

A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal component analysis.

Bioinformatics 2013 Nov 19;29(22):2877-83. Epub 2013 Aug 19.

Department of Biostatistics, Biostatistics Shared Resource Core, VCU Massey Cancer Center, Virginia Commonwealth University, Richmond, VA 23284, USA, Division of Biomedical Statistics and Informatics and Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt480DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3810845PMC
November 2013

Advanced maternal age in polyploidy with concurrent aneuploidy.

Am J Med Genet A 2013 May 29;161A(5):1200-2. Epub 2013 Mar 29.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1002/ajmg.a.35870DOI Listing
May 2013

Quality assessment metrics for whole genome gene expression profiling of paraffin embedded samples.

BMC Res Notes 2013 Jan 30;6:33. Epub 2013 Jan 30.

Biomedical Statistics and Informatics, Mayo Clinic, 200 First Street SW, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1186/1756-0500-6-33DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3626608PMC
January 2013

The Mayo prosthetic joint infection risk score: implication for surgical site infection reporting and risk stratification.

Infect Control Hosp Epidemiol 2012 Aug 20;33(8):774-81. Epub 2012 Jun 20.

Department of Medicine, Division of Infectious Diseases, Section of Orthopedic Infections, Mayo Clinic, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1086/666641DOI Listing
August 2012

Expression of endothelin 2 and localized clear cell renal cell carcinoma.

Hum Pathol 2012 Jun 1;43(6):843-9. Epub 2011 Nov 1.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1016/j.humpath.2011.07.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3274570PMC
June 2012

A scoring model of factors associated with Candida glabrata candidemia among critically ill patients.

Mycoses 2012 May 21;55(3):228-36. Epub 2011 Jul 21.

Department of Infectious Diseases, Sanford Health, Fargo, ND 58122, USA.

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http://dx.doi.org/10.1111/j.1439-0507.2011.02069.xDOI Listing
May 2012

Cefepime effectiveness in Gram-negative bloodstream infections.

J Antimicrob Chemother 2011 May 8;66(5):1156-60. Epub 2011 Mar 8.

Department of Medicine, Division of Infectious Diseases, University of Kentucky, Lexington, KY 40536, USA.

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https://academic.oup.com/jac/article-lookup/doi/10.1093/jac/
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http://dx.doi.org/10.1093/jac/dkr061DOI Listing
May 2011

Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform.

BMC Bioinformatics 2011 May 31;12:220. Epub 2011 May 31.

Division of Biomedical Statistics and Informatics, Mayo Clinic, 200 First Street SW, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1186/1471-2105-12-220DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3146450PMC
May 2011

Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing.

PLoS One 2011 Feb 25;6(2):e17490. Epub 2011 Feb 25.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0017490PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3045451PMC
February 2011

Recurrent gram-negative bloodstream infection: a 10-year population-based cohort study.

J Infect 2010 Jul 6;61(1):28-33. Epub 2010 Apr 6.

Department of Medicine, Division of Infectious Diseases, University of Kentucky, Lexington, KY, USA.

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http://dx.doi.org/10.1016/j.jinf.2010.03.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2900528PMC
July 2010

Tissue microarrays: one size does not fit all.

Diagn Pathol 2010 Jul 7;5:48. Epub 2010 Jul 7.

Department of Health Sciences Research, Mayo Clinic College of Medicine, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1186/1746-1596-5-48DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2910003PMC
July 2010

A prospective longitudinal analysis of cytomegalovirus (CMV)-specific CD4+ and CD8+ T cells in kidney allograft recipients at risk of CMV infection.

Transpl Int 2010 May 27;23(5):506-13. Epub 2009 Nov 27.

Divisions of Infectious Diseases, Department of Medicine, College of Medicine, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1111/j.1432-2277.2009.01017.xDOI Listing
May 2010

Bacteremia complicating gram-negative urinary tract infections: a population-based study.

J Infect 2010 Apr 28;60(4):278-85. Epub 2010 Jan 28.

Department of Medicine, Division of Infectious Diseases, University of Kentucky, Chandler Medical Center, 800 Rose Street, Room MN 672, Lexington, KY 40536, USA.

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http://dx.doi.org/10.1016/j.jinf.2010.01.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2841447PMC
April 2010

Epidemiology and outcome of Klebsiella species bloodstream infection: a population-based study.

Mayo Clin Proc 2010 Feb;85(2):139-44

Department of Medicine, University of Kentucky Chandler Medical Center, 800 Rose St, Room MN 672, Lexington, KY 40536, USA.

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http://dx.doi.org/10.4065/mcp.2009.0410DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2813821PMC
February 2010

Temporal trends in the incidence of Staphylococcus aureus bacteremia in Olmsted County, Minnesota, 1998 to 2005: a population-based study.

Clin Infect Dis 2009 Dec;49(12):e130-8

Division of Infectious Diseases, Department of Internal Medicine, School of Medicine, University of Kansas Medical Center, Kansas City, KS 66160, USA.

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https://academic.oup.com/cid/article-lookup/doi/10.1086/6484
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http://dx.doi.org/10.1086/648442DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3050712PMC
December 2009

Antimicrobial resistance trends of Escherichia coli bloodstream isolates: a population-based study, 1998-2007.

J Antimicrob Chemother 2009 Jul 12;64(1):169-74. Epub 2009 May 12.

Department of Medicine, Division of Infectious Diseases, University of Kentucky, Chandler Medical Center, Lexington, KY 40536, USA.

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http://dx.doi.org/10.1093/jac/dkp162DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2692504PMC
July 2009

A statistical model for iTRAQ data analysis.

J Proteome Res 2008 Aug 26;7(8):3091-101. Epub 2008 Jun 26.

Department of Biostatistics, Bioinformatics and Epidemiology, Medical University of South Carolina, Charleston, SC 29425, USA.

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http://dx.doi.org/10.1021/pr070520uDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2722948PMC
August 2008

Incidence of Pseudomonas aeruginosa bacteremia: a population-based study.

Am J Med 2008 Aug;121(8):702-8

Department of Medicine, Division of Infectious Diseases, College of Medicine, Mayo Clinic, Rochester, MN 55905, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2615391PMC
http://dx.doi.org/10.1016/j.amjmed.2008.03.029DOI Listing
August 2008

Statistical analysis of relative labeled mass spectrometry data from complex samples using ANOVA.

J Proteome Res 2008 Jan 4;7(1):225-33. Epub 2008 Jan 4.

Division of Biostatistics, Department of Health Sciences Research, Mayo Clinic, 200 First Street SW, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1021/pr700734fDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2528956PMC
January 2008

A method for automatically interpreting mass spectra of 18O-labeled isotopic clusters.

Mol Cell Proteomics 2007 Feb 26;6(2):305-18. Epub 2006 Oct 26.

Mayo Proteomics Research Center, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1074/mcp.M600148-MCP200DOI Listing
February 2007

Experimental design and analysis of antibody microarrays: applying methods from cDNA arrays.

Cancer Res 2005 Apr;65(8):2985-9

Department of Health Sciences Research, Mayo Clinic, 200 First Street Southwest, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-04-3213DOI Listing
April 2005