Javier Garcia-Garcia

Javier Garcia-Garcia

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Javier Garcia-Garcia

Javier Garcia-Garcia

Publications by authors named "Javier Garcia-Garcia"

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38Publications

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On the mechanisms of protein interactions: predicting their affinity from unbound tertiary structures.

Bioinformatics 2018 02;34(4):592-598

Structural Bioinformatics Lab, Department of Experimental and Health Science, Universitat Pompeu Fabra, Barcelona 08003, Spain.

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http://dx.doi.org/10.1093/bioinformatics/btx616DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5860604PMC
February 2018

Chemical vapor deposition growth of boron-carbon-nitrogen layers from methylamine borane thermolysis products.

Nanotechnology 2018 01;29(2):025603

Departamento de Física de Materiales, Universidad Autónoma de Madrid, Campus de Cantoblanco E-28049, Madrid, Spain. Instituto Nicolas Cabrera, Universidad Autónoma de Madrid, Campus de Cantoblanco E-28049, Madrid, Spain.

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http://stacks.iop.org/0957-4484/29/i=2/a=025603?key=crossref
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http://dx.doi.org/10.1088/1361-6528/aa9c07DOI Listing
January 2018

Genetic and functional characterization of disease associations explains comorbidity.

Sci Rep 2017 07 24;7(1):6207. Epub 2017 Jul 24.

Structural Bioinformatics Group, GRIB, IMIM, Department of Experimental and Life Sciences, Universitat Pompeu Fabra, 08003, Barcelona, Catalonia, Spain.

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http://dx.doi.org/10.1038/s41598-017-04939-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5524755PMC
July 2017

iFrag: A Protein-Protein Interface Prediction Server Based on Sequence Fragments.

J Mol Biol 2017 02 10;429(3):382-389. Epub 2016 Dec 10.

Structural Bioinformatics Laboratory, Department of Experimental and Health Sciences, Universitat Pompeu Fabra, C/Doctor Aiguader 88, 08003 Barcelona, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.jmb.2016.11.034DOI Listing
February 2017

DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants.

Nucleic Acids Res 2017 01 19;45(D1):D833-D839. Epub 2016 Oct 19.

Research Programme on Biomedical Informatics (GRIB), Hospital del Mar Medical Research Institute (IMIM), Department of Experimental and Health Sciences (DCEXS), Universitat Pompeu Fabra (UPF), C/Dr Aiguader 88, E-08003 Barcelona, Spain

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http://dx.doi.org/10.1093/nar/gkw943DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5210640PMC
January 2017

The N-Terminal Phosphorylation of RB by p38 Bypasses Its Inactivation by CDKs and Prevents Proliferation in Cancer Cells.

Mol Cell 2016 10 15;64(1):25-36. Epub 2016 Sep 15.

Cell Signaling Research Group, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra (UPF), 08003 Barcelona, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2016.08.015DOI Listing
October 2016

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Nat Commun 2016 10 10;7:13205. Epub 2016 Oct 10.

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http://dx.doi.org/10.1038/ncomms13205DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062501PMC
October 2016

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Nat Commun 2016 08 23;7:12460. Epub 2016 Aug 23.

Sage Bionetworks, Seattle, Washington 98115, USA.

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http://dx.doi.org/10.1038/ncomms12460DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996969PMC
August 2016

Chlorine Insertion Promoting Iron Reduction in Ba-Fe Hexagonal Perovskites: Effect on the Structural and Magnetic Properties.

Inorg Chem 2016 Jun 8;55(12):6261-70. Epub 2016 Jun 8.

Departamento de Química Inorgánica, Facultad de CC. Químicas, Universidad Complutense de Madrid , 28040 Madrid, Spain.

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http://dx.doi.org/10.1021/acs.inorgchem.6b00893DOI Listing
June 2016

Economic evaluations of implantable cardioverter defibrillators: a systematic review.

Eur J Health Econ 2015 Nov 17;16(8):879-93. Epub 2014 Oct 17.

Red de Investigación en Servicios de Salud en Enfermedades Crónicas (REDISSEC), Madrid, Spain.

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http://dx.doi.org/10.1007/s10198-014-0637-xDOI Listing
November 2015

On the use of knowledge-based potentials for the evaluation of models of protein-protein, protein-DNA, and protein-RNA interactions.

Adv Protein Chem Struct Biol 2014 ;94:77-120

Structural Bioinformatics Lab. (GRIB), Departament de Ciѐncies Experimentals i de la Salut, Universitat Pompeu Fabra, Barcelona, Catalunya, Spain. Electronic address:

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http://dx.doi.org/10.1016/B978-0-12-800168-4.00004-4DOI Listing
April 2015

Rapid degradation of zinc oxide nanoparticles by phosphate ions.

Beilstein J Nanotechnol 2014 5;5:2007-15. Epub 2014 Nov 5.

Institut für Physik, Universität Augsburg, Universitätsstr. 1, 86159 Augsburg, Germany.

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http://dx.doi.org/10.3762/bjnano.5.209DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4222298PMC
November 2014

GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms.

Bioinformatics 2014 Jun 14;30(12):1789-90. Epub 2014 Feb 14.

Departament de Ciencies Experimentals i de la Salut, Structural Bioinformatics Group (GRIB-IMIM), Universitat Pompeu Fabra, Barcelona, 08003 Catalonia, Spain.

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http://dx.doi.org/10.1093/bioinformatics/btu092DOI Listing
June 2014

ArchDB 2014: structural classification of loops in proteins.

Nucleic Acids Res 2014 Jan 21;42(Database issue):D315-9. Epub 2013 Nov 21.

Structural Bioinformatics Lab (GRIB-IMIM), Universitat Pompeu Fabra, Barcelona Research Park of Biomedicine (PRBB), Barcelona, Catalonia, 08950, Spain and Institute of Biological, Environmental and Rural Sciences, Aberystwyth University, SY23 3DA Aberystwyth, Ceredigion, UK.

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http://dx.doi.org/10.1093/nar/gkt1189DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964960PMC
January 2014

iLoops: a protein-protein interaction prediction server based on structural features.

Bioinformatics 2013 Sep 9;29(18):2360-2. Epub 2013 Jul 9.

Structural Bioinformatics Laboratory, Universitat Pompeu Fabra, 08003 Barcelona, Spain.

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http://dx.doi.org/10.1093/bioinformatics/btt401DOI Listing
September 2013

Bilateral renal infarction in a lupus patient: an unusual pathology.

Clin Med Insights Case Rep 2013 23;6:87-91. Epub 2013 May 23.

Department of Urology, University Hospital of Salamanca, Salamanca, Spain.

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http://dx.doi.org/10.4137/CCRep.S11633DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3665658PMC
June 2013

Understanding protein-protein interactions using local structural features.

J Mol Biol 2013 Apr 23;425(7):1210-24. Epub 2013 Jan 23.

Structural Bioinformatics Group (GRIB-IMIM), Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, C/Dr. Aiguader 88, 08003 Barcelona, Catalonia, Spain.

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http://dx.doi.org/10.1016/j.jmb.2013.01.014DOI Listing
April 2013

A taxonomy of organ-specific breast cancer metastases based on a protein-protein interaction network.

Mol Biosyst 2012 Aug 18;8(8):2085-96. Epub 2012 Jun 18.

Biological Clues of the Invasive and Metastatic Phenotype Group, Bellvitge Biomedical Research Institute-IDIBELL, Gran Via de L'Hospitalet, 199 L'Hospitalet de Llobregat, E-08908 Barcelona, Spain.

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http://dx.doi.org/10.1039/c2mb25104cDOI Listing
August 2012

BIPS: BIANA Interolog Prediction Server. A tool for protein-protein interaction inference.

Nucleic Acids Res 2012 Jul 11;40(Web Server issue):W147-51. Epub 2012 Jun 11.

Structural Bioinformatics Laboratory (GRIB-IMIM), Universitat Pompeu Fabra, Barcelona Research Park of Biomedicine (PRBB), 08003 Barcelona, Catalonia, Spain.

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http://dx.doi.org/10.1093/nar/gks553DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3394316PMC
July 2012

Giant iliac aneurisms.

Arch Esp Urol 2012 Jun;65(5):588

Urology Department, Hospital Clinico Universitario de Salamanca, Spain.

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June 2012

Extending signaling pathways with protein-interaction networks. Application to apoptosis.

OMICS 2012 May 2;16(5):245-56. Epub 2012 Mar 2.

Structural Bioinformatics Group, GRIB, Universitat Pompeu Fabra, Barcelona, Catalonia, Spain.

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http://dx.doi.org/10.1089/omi.2011.0130DOI Listing
May 2012

Networks of ProteinProtein Interactions: From Uncertainty to Molecular Details.

Mol Inform 2012 May 30;31(5):342-62. Epub 2012 Apr 30.

Structural Bioinformatics Group, GRIB-IMIM, Universitat Pompeu Fabra, Barcelona Research Park of Biomedicine (PRBB), Catalonia, Spain.

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http://dx.doi.org/10.1002/minf.201200005DOI Listing
May 2012

Prediction and comparison of Salmonella-human and Salmonella-Arabidopsis interactomes.

Chem Biodivers 2012 May;9(5):991-1018

Forschungszentrum Jülich, Institute of Complex Systems (ICS-5), D-52425 Jülich, Germany.

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http://dx.doi.org/10.1002/cbdv.201100392DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3407687PMC
May 2012

Spontaneous resolution of ureterovaginal fistula.

Arch Esp Urol 2011 Jan-Feb;64(1):66-9

Urology Department, Hospital Clínico Universitario de Salamanca, Salamanca, Spain.

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June 2011

Retroperitoneal malignant fibrous histiocytoma: case report.

Arch Esp Urol 2010 Jul-Aug;63(6):477-9

Urology Service, Clinical University Hospital of Salamanca, Salamanca, Spain.

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January 2011

Perylene-labeled silica nanoparticles: synthesis and characterization of three novel silica nanoparticle species for live-cell imaging.

Small 2010 Nov;6(21):2427-35

Ludwig-Maximilians-University Munich, Department of Chemistry, Physical Chemistry I, Butenandtstr. 11, Gerhard-Ertl-Gebäude, 81377 Munich, Germany.

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http://dx.doi.org/10.1002/smll.201000762DOI Listing
November 2010

Nephrectomy in polycystic kidney disease before transplantation.

Arch Esp Urol 2010 Jun;63(5):403

Department and Chair of Urology, Salamanca University, Clinic Hospital, Salamanca, Spain.

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June 2010

Biana: a software framework for compiling biological interactions and analyzing networks.

BMC Bioinformatics 2010 Jan 27;11:56. Epub 2010 Jan 27.

Structural Bioinformatics Lab, Universitat Pompeu Fabra-IMIM, Barcelona Research Park of Biomedicine, Barcelona, Catalonia, Spain.

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http://dx.doi.org/10.1186/1471-2105-11-56DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098100PMC
January 2010

[Malignant priapism and secondary bladder cancer].

Arch Esp Urol 2009 Apr;62(3):239-42

Servicio y Cátedra de Urología, Hospital Clínico Universitario de Salamanca, Salamanca, España.

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http://dx.doi.org/10.4321/s0004-06142009000300013DOI Listing
April 2009

With phosphinophosphonic acids to nanostructured, water-soluble, and catalytically active rhodium clusters.

Angew Chem Int Ed Engl 2007 ;46(7):1164-7

Institut für Anorganische Chemie und Strukturchemie, Lehrstuhl I: Bioanorganische Chemie und Katalyse, Heinrich-Heine-Universität Düsseldorf, Universitätsstrasse 1, 40225 Düsseldorf, Germany.

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http://dx.doi.org/10.1002/anie.200603402DOI Listing
April 2007