Jason W H Wong

Jason W H Wong

UNVERIFIED PROFILE

Are you Jason W H Wong?   Register this Author

Register author
Jason W H Wong

Jason W H Wong

Publications by authors named "Jason W H Wong"

Are you Jason W H Wong?   Register this Author

77Publications

1398Reads

41Profile Views

Mutational processes of distinct POLE exonuclease domain mutants drive an enrichment of a specific TP53 mutation in colorectal cancer.

PLoS Genet 2020 Feb 3;16(2):e1008572. Epub 2020 Feb 3.

School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong Special Administrative Region.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pgen.1008572DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7018097PMC
February 2020

Assessing the Evolutionary Conservation of Protein Disulphide Bonds.

Authors:
Jason W H Wong

Methods Mol Biol 2019 ;1967:9-19

School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong, China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-9187-7_2DOI Listing
November 2019

Scarcity of Recurrent Regulatory Driver Mutations in Colorectal Cancer Revealed by Targeted Deep Sequencing.

JNCI Cancer Spectr 2019 Jun 16;3(2):pkz012. Epub 2019 Apr 16.

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Sydney, Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/jncics/pkz012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6649856PMC
June 2019

Finding cancer driver mutations in the era of big data research.

Biophys Rev 2019 Feb 2;11(1):21-29. Epub 2018 Apr 2.

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Sydney, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s12551-018-0415-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6381364PMC
February 2019

Dual roles of different redox forms of complement factor H in protecting against age related macular degeneration.

Free Radic Biol Med 2018 12 22;129:237-246. Epub 2018 Sep 22.

Department of Infectious Diseases, Immunology and Sexual Health St George Hospital 2, South Street, Kogarah, Sydney, NSW, Australia; Faculty of Medicine, St George and Sutherland Clinical School, University of New South Wales, St George Hospital, Sydney, NSW, Australia; Department of Rheumatology, St George Hospital, Belgrave Street, Kogarah, Sydney, NSW, Australia. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S08915849183106
Publisher Site
http://dx.doi.org/10.1016/j.freeradbiomed.2018.09.034DOI Listing
December 2018

A Comprehensive Human Gastric Cancer Organoid Biobank Captures Tumor Subtype Heterogeneity and Enables Therapeutic Screening.

Cell Stem Cell 2018 12 18;23(6):882-897.e11. Epub 2018 Oct 18.

Department of Pathology, The University of Hong Kong, Queen Mary Hospital, Pokfulam, Hong Kong; The Jockey Club Centre for Clinical Innovation and Discovery, LKS Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S19345909183048
Publisher Site
http://dx.doi.org/10.1016/j.stem.2018.09.016DOI Listing
December 2018

Analysis of 7,815 cancer exomes reveals associations between mutational processes and somatic driver mutations.

PLoS Genet 2018 11 9;14(11):e1007779. Epub 2018 Nov 9.

Prince of Wales Clinical School and Lowy Cancer Research Centre, Faculty of Medicine, UNSW Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pgen.1007779DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6249022PMC
November 2018

Disruption of a -35 kb Enhancer Impairs CTCF Binding and Expression in Colorectal Cells.

Clin Cancer Res 2018 09 13;24(18):4602-4611. Epub 2018 Jun 13.

Adult Cancer Program, Lowy Cancer Research Centre and Prince of Wales Clinical School, UNSW Sydney, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-17-3678DOI Listing
September 2018

Phylogenetic Analysis Using Protein Mass Spectrometry.

Methods Mol Biol 2017 ;1549:135-146

Prince of Wales Clinical School, UNSW Australia, Sydney, NSW, 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-4939-6740-7_11DOI Listing
February 2018

Identification of allosteric disulfides from labile bonds in X-ray structures.

R Soc Open Sci 2018 Feb 7;5(2):171058. Epub 2018 Feb 7.

The Centenary Institute, Camperdown, New South Wales 2050, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1098/rsos.171058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5830721PMC
February 2018

Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget 2017 Nov 27;8(56):95841-95852. Epub 2017 Sep 27.

Prince of Wales Clinical School, Faculty of Medicine, UNSW Sydney, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.18632/oncotarget.21339DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5707065PMC
November 2017

The interaction between cytosine methylation and processes of DNA replication and repair shape the mutational landscape of cancer genomes.

Nucleic Acids Res 2017 Jul;45(13):7786-7795

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkx463DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5737810PMC
July 2017

Functional Mutations Form at CTCF-Cohesin Binding Sites in Melanoma Due to Uneven Nucleotide Excision Repair across the Motif.

Cell Rep 2016 12;17(11):2865-2872

Prince of Wales Clinical School and Lowy Cancer Research Center, UNSW Australia, Sydney, NSW 2052, Australia. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.celrep.2016.11.055DOI Listing
December 2016

Mutation hotspots in cis-regulatory regions in cancer.

Oncoscience 2016 23;3(11-12):318-319. Epub 2016 Nov 23.

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Australia, Sydney NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://impactjournals.com/oncoscience/index.php?abs=325
Publisher Site
http://dx.doi.org/10.18632/oncoscience.325DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5235919PMC
November 2016

An investigation of the potential for epigenetic inactivation by transcription read-through in a sporadic colorectal cancer.

Gene 2016 Jul 22;585(1):154-158. Epub 2016 Mar 22.

Adult Cancer Program, Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.gene.2016.03.031DOI Listing
July 2016

Arrested Hematopoiesis and Vascular Relaxation Defects in Mice with a Mutation in Dhfr.

Mol Cell Biol 2016 Apr 31;36(8):1222-36. Epub 2016 Mar 31.

Adult Cancer Program, Prince of Wales Clinical School, Lowy Cancer Research Centre, University of New South Wales, Sydney, NSW, Australia Department of Haematology, Prince of Wales Hospital, Sydney, NSW, Australia

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1128/MCB.01035-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836279PMC
April 2016

PDGF-AB and 5-Azacytidine induce conversion of somatic cells into tissue-regenerative multipotent stem cells.

Proc Natl Acad Sci U S A 2016 Apr 4;113(16):E2306-15. Epub 2016 Apr 4.

Lowy Cancer Research Centre, University of New South Wales (UNSW) Australia, Sydney, NSW 2052, Australia; The Prince of Wales Clinical School, UNSW Australia, Sydney, NSW 2052, Australia; Department of Haematology, The Prince of Wales Hospital, Sydney, NSW 2032, Australia

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1518244113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4843430PMC
April 2016

Differential DNA repair underlies mutation hotspots at active promoters in cancer genomes.

Nature 2016 Apr;532(7598):259-63

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Australia, Sydney 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nature17437DOI Listing
April 2016

WDR5 Supports an N-Myc Transcriptional Complex That Drives a Protumorigenic Gene Expression Signature in Neuroblastoma.

Cancer Res 2015 Dec 15;75(23):5143-54. Epub 2015 Oct 15.

Children's Cancer Institute Australia, Randwick, Sydney, New South Wales, Australia. School of Women's and Children's Health, Faculty of Medicine, University of New South Wales, Randwick, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/0008-5472.CAN-15-0423DOI Listing
December 2015

OncoCis: annotation of cis-regulatory mutations in cancer.

Genome Biol 2014 ;15(10):485

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW, Australia, Sydney 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/s13059-014-0485-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4224696PMC
October 2015

The search for cis-regulatory driver mutations in cancer genomes.

Oncotarget 2015 Oct;6(32):32509-25

Prince of Wales Clinical School and Lowy Cancer Research Centre, UNSW Australia, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.18632/oncotarget.5085DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741709PMC
October 2015

FluClass: A novel algorithm and approach to score and visualize the phylogeny of the influenza virus using mass spectrometry.

Anal Chim Acta 2015 Oct 10;895:54-61. Epub 2015 Sep 10.

Prince of Wales Clinical School, Faculty of Medicine, UNSW Australia, Sydney, NSW 2052, Australia. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.aca.2015.09.004DOI Listing
October 2015

Systematic Screening of Promoter Regions Pinpoints Functional Cis-Regulatory Mutations in a Cutaneous Melanoma Genome.

Mol Cancer Res 2015 Aug 16;13(8):1218-26. Epub 2015 Jun 16.

Prince of Wales Clinical School, University of New South Wales Australia, Sydney, Australia. Lowy Cancer Research Centre, University of New South Wales Australia, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1541-7786.MCR-15-0146DOI Listing
August 2015

Lynch syndrome associated with two MLH1 promoter variants and allelic imbalance of MLH1 expression.

Hum Mutat 2015 Jun 17;36(6):622-30. Epub 2015 Apr 17.

Adult Cancer Program, Lowy Cancer Research Centre and Prince of Wales Clinical School, UNSW Australia, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/humu.22785
Publisher Site
http://dx.doi.org/10.1002/humu.22785DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682451PMC
June 2015

Single nucleotide polymorphism array profiling identifies distinct chromosomal aberration patterns across colorectal adenomas and carcinomas.

Genes Chromosomes Cancer 2015 May 27;54(5):303-14. Epub 2015 Feb 27.

Adult Cancer Program, Prince of Wales Clinical School, Lowy Cancer Research Centre, UNSW, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/gcc.22243DOI Listing
May 2015

Opposing regulation of BIM and BCL2 controls glucocorticoid-induced apoptosis of pediatric acute lymphoblastic leukemia cells.

Blood 2015 Jan 21;125(2):273-83. Epub 2014 Oct 21.

Children's Cancer Institute Australia for Medical Research, Lowy Cancer Research Centre, and the.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2014-05-576470DOI Listing
January 2015

Bioorthogonal labelling of 3-nitrotyrosine in peptides and proteins through diazotisation mediated azidation.

Org Biomol Chem 2015 Jan 24;13(2):374-8. Epub 2014 Nov 24.

Lowy Cancer Research Centre and the Prince of Wales Clinical School, UNSW Australia, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://xlink.rsc.org/?DOI=C4OB02133A
Publisher Site
http://dx.doi.org/10.1039/c4ob02133aDOI Listing
January 2015

Epigenetic inactivation of the candidate tumor suppressor USP44 is a frequent and early event in colorectal neoplasia.

Epigenetics 2014 Aug 16;9(8):1092-100. Epub 2014 May 16.

Adult Cancer Program; Lowy Cancer Research Centre and Prince of Wales Clinical School; Sydney, NSW Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.4161/epi.29222DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4164494PMC
August 2014

Redox regulation of methionine aminopeptidase 2 activity.

J Biol Chem 2014 May 3;289(21):15035-43. Epub 2014 Apr 3.

From the Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, New South Wales 2052, Australia

View Article

Download full-text PDF

Source
http://www.jbc.org/lookup/doi/10.1074/jbc.M114.554253
Publisher Site
http://dx.doi.org/10.1074/jbc.M114.554253DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4031554PMC
May 2014

Control of blood proteins by functional disulfide bonds.

Blood 2014 Mar 12;123(13):2000-7. Epub 2014 Feb 12.

Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2014-01-549816DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3968386PMC
March 2014

BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells.

Nucleic Acids Res 2014 Jan 31;42(Database issue):D172-7. Epub 2013 Oct 31.

Lowy Cancer Research Centre and the Prince of Wales Clinical School, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkt1036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964976PMC
January 2014

Mechanism of dimerization of a recombinant mature vascular endothelial growth factor C.

Biochemistry 2014 Jan 26;53(1):7-9. Epub 2013 Dec 26.

Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales , Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bi401518bDOI Listing
January 2014

Tyrosine nitration moderates the peptidase activity of human methionyl aminopeptidase 2.

Biochem Biophys Res Commun 2013 Oct 13;440(1):37-42. Epub 2013 Sep 13.

Lowy Cancer Research Centre and the Prince of Wales Clinical School, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bbrc.2013.09.035DOI Listing
October 2013

Mass trees: a new phylogenetic approach and algorithm to chart evolutionary history with mass spectrometry.

Anal Chem 2013 Jun 21;85(11):5475-82. Epub 2013 May 21.

School of Molecular Bioscience, University of Sydney, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ac4005875DOI Listing
June 2013

Bioinformatics analysis reveals biophysical and evolutionary insights into the 3-nitrotyrosine post-translational modification in the human proteome.

Open Biol 2013 Feb 6;3(2):120148. Epub 2013 Feb 6.

Lowy Cancer Research Centre, Prince of Wales Clinical School, University of New South Wales, Sydney 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1098/rsob.120148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3603447PMC
February 2013

Signal analysis for genome-wide maps of histone modifications measured by ChIP-seq.

Bioinformatics 2012 Apr 17;28(8):1062-9. Epub 2012 Feb 17.

Lowy Cancer Research Centre, Prince of Wales Clinical School, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bts085DOI Listing
April 2012

MMSAT: automated quantification of metabolites in selected reaction monitoring experiments.

Anal Chem 2012 Jan 13;84(1):470-4. Epub 2011 Dec 13.

Lowy Cancer Research Centre, Prince of Wales Clinical School, Faculty of Medicine, University of New South Wales, Sydney, NSW, 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ac2026578DOI Listing
January 2012

Lateral self-association of VWF involves the Cys2431-Cys2453 disulfide/dithiol in the C2 domain.

Blood 2011 Nov 12;118(19):5312-8. Epub 2011 Sep 12.

Adult Cancer Program, Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1182/blood-2011-06-360297DOI Listing
November 2011

Mass and relative elution time profiling: two-dimensional analysis of sphingolipids in Alzheimer's disease brains.

Biochem J 2011 Aug;438(1):165-75

Bioanalytical Mass Spectrometry Facility, Mark Wainwright Analytical Centre, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1042/BJ20110566DOI Listing
August 2011

Noninvasive imaging of cell death using an Hsp90 ligand.

J Am Chem Soc 2011 Mar 15;133(9):2832-5. Epub 2011 Feb 15.

Lowy Cancer Research Centre and POW Clinical School, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ja110226yDOI Listing
March 2011

Disulfide bond acquisition through eukaryotic protein evolution.

Mol Biol Evol 2011 Jan 30;28(1):327-34. Epub 2010 Jul 30.

Prince of Wales Clinical School and Lowy Cancer Research Centre, Faculty of Medicine, University of New South Wales, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/molbev/msq194DOI Listing
January 2011

Control of mature protein function by allosteric disulfide bonds.

Antioxid Redox Signal 2011 Jan 28;14(1):113-26. Epub 2010 Oct 28.

Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/ars.2010.3620DOI Listing
January 2011

Disulfide bond that constrains the HIV-1 gp120 V3 domain is cleaved by thioredoxin.

J Biol Chem 2010 Dec 13;285(51):40072-80. Epub 2010 Oct 13.

Lowy Cancer Research Centre and Prince of Wales Clinical School, University of New South Wales, Sydney, New South Wales 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M110.185371DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3000989PMC
December 2010

Rapid typing and subtyping of vaccine strains of the influenza virus with high resolution mass spectrometry.

Eur J Mass Spectrom (Chichester) 2010 ;16(3):321-9

School of Molecular & Microbial Biosciences G-08, University of Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1255/ejms.1056DOI Listing
August 2010

Rapid differentiation of seasonal and pandemic H1N1 influenza through proteotyping of viral neuraminidase with mass spectrometry.

Anal Chem 2010 Jun;82(11):4584-90

School of Molecular Bioscience, University of Sydney, Sydney, New South Wales, Australia.

View Article

Download full-text PDF

Source
http://pubs.acs.org/doi/abs/10.1021/ac100594j
Publisher Site
http://dx.doi.org/10.1021/ac100594jDOI Listing
June 2010

Typing of human and animal strains of influenza virus with conserved signature peptides of matrix M1 protein by high resolution mass spectrometry.

J Virol Methods 2010 May 1;165(2):178-85. Epub 2010 Feb 1.

School of Molecular & Microbial Biosciences, University of Sydney, Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jviromet.2010.01.015DOI Listing
May 2010

FluTyper-an algorithm for automated typing and subtyping of the influenza virus from high resolution mass spectral data.

BMC Bioinformatics 2010 May 19;11:266. Epub 2010 May 19.

Prince of Wales Clinical School & Lowy Cancer Research Centre, Faculty of Medicine, University of New South Wales, Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-11-266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098065PMC
May 2010

An overview of label-free quantitation methods in proteomics by mass spectrometry.

Methods Mol Biol 2010 ;604:273-83

UNSW Cancer Research Centre, University of New South Wales, Sydney, NSW, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/978-1-60761-444-9_18DOI Listing
February 2010

Signature peptides of influenza nucleoprotein for the typing and subtyping of the virus by high resolution mass spectrometry.

Analyst 2009 Nov 11;134(11):2253-61. Epub 2009 Sep 11.

School of Molecular & Microbial Biosciences G-08, University of Sydney, Sydney, NSW 2006, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/b912234fDOI Listing
November 2009

ETISEQ--an algorithm for automated elution time ion sequencing of concurrently fragmented peptides for mass spectrometry-based proteomics.

BMC Bioinformatics 2009 Aug 10;10:244. Epub 2009 Aug 10.

UNSW Cancer Research Centre, University of New South Wales, Sydney, NSW 2052, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-10-244DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2731054PMC
August 2009

Subtyping of the influenza virus by high resolution mass spectrometry.

Anal Chem 2009 May;81(9):3500-6

School of Molecular & Microbial Biosciences, University of Sydney, NSW 2006, Australia.

View Article

Download full-text PDF

Source
http://pubs.acs.org/doi/abs/10.1021/ac900026f
Publisher Site
http://dx.doi.org/10.1021/ac900026fDOI Listing
May 2009

Activity profiling of platelets by chemical proteomics.

Proteomics 2009 Jan;9(1):40-50

Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Belfield, Dublin, Ireland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/pmic.200800185DOI Listing
January 2009

Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments.

Brief Bioinform 2008 Mar 28;9(2):156-65. Epub 2007 Sep 28.

Conway Institute of Biomolecular and Biomedical Research, University College Dublin, Belfield, Dublin 4, Ireland.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bib/bbm046DOI Listing
March 2008

msmsEval: tandem mass spectral quality assignment for high-throughput proteomics.

BMC Bioinformatics 2007 Feb 9;8:51. Epub 2007 Feb 9.

Chemistry Department, Oxford University, Physical and Theoretical Chemistry Laboratory, South Parks Road, Oxford OX1 3QZ, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-8-51DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1803797PMC
February 2007

Performance of the computer algorithm COMPLX for the detection of protein complexes in the mass spectra of simulated biological mixtures.

J Mass Spectrom 2005 Sep;40(9):1187-96

School of Molecular and Microbial Biosciences, The University of Sydney, Sydney, Australia.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/jms.894
Publisher Site
http://dx.doi.org/10.1002/jms.894DOI Listing
September 2005

Application of fast Fourier transform cross-correlation for the alignment of large chromatographic and spectral datasets.

Anal Chem 2005 Sep;77(17):5655-61

Physical and Theoretical Chemistry Laboratory, Chemistry Department, Oxford University, South Parks Road, Oxford OX1 3QZ, England.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ac050619pDOI Listing
September 2005

Deterministic projection by growing cell structure networks for visualization of high-dimensionality datasets.

J Biomed Inform 2005 Aug 5;38(4):322-30. Epub 2005 Mar 5.

Physical and Theoretical Chemistry Laboratory, Department of Chemistry, Oxford University, South Parks Road, Oxford OX1 3QZ, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jbi.2005.02.002DOI Listing
August 2005

SpecAlign--processing and alignment of mass spectra datasets.

Bioinformatics 2005 May 2;21(9):2088-90. Epub 2005 Feb 2.

Chemistry Department, Oxford University, Physical and Theoretical Chemistry Laboratory, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/bti300DOI Listing
May 2005

Hydroxyl radical probe of the calmodulin-melittin complex interface by electrospray ionization mass spectrometry.

J Am Soc Mass Spectrom 2005 Feb;16(2):225-33

School of Molecular and Microbial Biosciences, The University of Sydney, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jasms.2004.11.009DOI Listing
February 2005

Photochemical and electrophysical production of radicals on millisecond timescales to probe the structure, dynamics and interactions of proteins.

Photochem Photobiol Sci 2004 Aug 28;3(8):741-8. Epub 2004 May 28.

School of Science, Griffith University, Brisbane, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/b315904cDOI Listing
August 2004

COMPLX: a computer algorithm for the detection of protein-ligand and other macromolecular complexes in mass spectra.

J Mass Spectrom 2003 May;38(5):573-81

School of Molecular and Microbial Biosciences, University of Sydney, Sydney, New South Wales 2006, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/jms.474DOI Listing
May 2003

Study of the ribonuclease-S-protein-peptide complex using a radical probe and electrospray ionization mass spectrometry.

Anal Chem 2003 Apr;75(7):1557-63

School of Molecular and Microbial Biosciences, The University of Sydney, Sydney, Australia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/ac026400hDOI Listing
April 2003