Jason R Grant

Jason R Grant

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Jason R Grant

Jason R Grant

Publications by authors named "Jason R Grant"

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A large interactive visual database of copy number variants discovered in taurine cattle.

Gigascience 2019 06;8(6)

Department of Agricultural, Food and Nutritional Science (AFNS), University of Alberta, Edmonton, AB, Canada.

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http://dx.doi.org/10.1093/gigascience/giz073DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6593363PMC
June 2019

Rapid allopolyploid radiation of moonwort ferns (Botrychium; Ophioglossaceae) revealed by PacBio sequencing of homologous and homeologous nuclear regions.

Mol Phylogenet Evol 2018 03 11;120:342-353. Epub 2017 Dec 11.

Department of Integrative Biology, University of California at Berkeley, 3040 Valley Life Sciences Building, Berkeley, CA 94720-3140, USA.

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http://dx.doi.org/10.1016/j.ympev.2017.11.025DOI Listing
March 2018

PHASTER: a better, faster version of the PHAST phage search tool.

Nucleic Acids Res 2016 07 3;44(W1):W16-21. Epub 2016 May 3.

Department of Computing Science, Edmonton, AB T6G 2E8, Canada Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada National Institute for Nanotechnology, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada

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http://dx.doi.org/10.1093/nar/gkw387DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987931PMC
July 2016

Heatmapper: web-enabled heat mapping for all.

Nucleic Acids Res 2016 07 17;44(W1):W147-53. Epub 2016 May 17.

Department of Computing Science, University of Alberta, Edmonton, AB T6G 2E8, Canada Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada National Institute for Nanotechnology, 11421 Saskatchewan Drive, Edmonton, AB T6G 2M9, Canada

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http://dx.doi.org/10.1093/nar/gkw419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987948PMC
July 2016

Accurate, fully-automated NMR spectral profiling for metabolomics.

PLoS One 2015 27;10(5):e0124219. Epub 2015 May 27.

Department of Computing Science, University of Alberta, Edmonton, AB, Canada; Department of Biological Sciences, University of Alberta, Edmonton, AB, Canada; National Research Council, National Institute for Nanotechnology, Edmonton, AB, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0124219PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4446368PMC
April 2016

ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli.

Nucleic Acids Res 2016 Jan 19;44(D1):D495-501. Epub 2015 Oct 19.

Department of Computing Science, University of Alberta, Edmonton, AB, T6G 2E9, Canada Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E8, Canada National Institute for Nanotechnology, 11421 Saskatchewan Drive, Edmonton, AB, T6G 2M9, Canada

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http://dx.doi.org/10.1093/nar/gkv1060DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4702790PMC
January 2016

An integrated platform for bovine DNA methylome analysis suitable for small samples.

BMC Genomics 2014 Jun 9;15:451. Epub 2014 Jun 9.

Laboratory of Functional Genomics of Early Embryonic Development, Institut des nutraceutiques et des aliments fonctionnels, Faculté des sciences de l'agriculture et de l'alimentation, Pavillon des services, Université Laval, Québec G1V 0A6, Canada.

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http://dx.doi.org/10.1186/1471-2164-15-451DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092217PMC
June 2014

Molecular phylogenetics supports widespread cryptic species in moonworts (Botrychium s.s., Ophioglossaceae).

Am J Bot 2014 Jan 7;101(1):128-40. Epub 2014 Jan 7.

Laboratoire de botanique évolutive, Université de Neuchâtel, rue Emile-Argand 11, 2000 Neuchâtel, Switzerland.

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http://dx.doi.org/10.3732/ajb.1300154DOI Listing
January 2014

Comparing thousands of circular genomes using the CGView Comparison Tool.

BMC Genomics 2012 May 23;13:202. Epub 2012 May 23.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G2P5, Canada.

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http://dx.doi.org/10.1186/1471-2164-13-202DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3469350PMC
May 2012

In-depth annotation of SNPs arising from resequencing projects using NGS-SNP.

Bioinformatics 2011 Aug 22;27(16):2300-1. Epub 2011 Jun 22.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G2P5, Canada.

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http://dx.doi.org/10.1093/bioinformatics/btr372DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3150039PMC
August 2011

Characterization of bovine miRNAs by sequencing and bioinformatics analysis.

BMC Mol Biol 2009 Sep 16;10:90. Epub 2009 Sep 16.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G2P5, Canada.

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http://dx.doi.org/10.1186/1471-2199-10-90DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2761914PMC
September 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

The CGView Server: a comparative genomics tool for circular genomes.

Nucleic Acids Res 2008 Jul 14;36(Web Server issue):W181-4. Epub 2008 Apr 14.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Canada.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gkn179DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2447734PMC
July 2008

Identification of a novel immunosubversion mechanism mediated by a virologue of the B-lymphocyte receptor TACI.

Clin Vaccine Immunol 2007 Jul 30;14(7):907-17. Epub 2007 May 30.

The Michael Smith Laboratories, The Biomedical Research Centre, Department of Microbiology and Immunology, University of British Columbia, Vancouver, BC, Canada.

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http://dx.doi.org/10.1128/CVI.00058-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1951057PMC
July 2007

The adenovirus E3-6.7K protein adopts diverse membrane topologies following posttranslational translocation.

J Virol 2004 Jan;78(1):454-63

Departments of Medical Genetics, Microbiology and Immunology, and Zoology, Biotechnology Laboratory, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC303379PMC
http://dx.doi.org/10.1128/jvi.78.1.454-463.2004DOI Listing
January 2004

Adenovirus E3-6.7K maintains calcium homeostasis and prevents apoptosis and arachidonic acid release.

J Virol 2002 Feb;76(4):1578-87

Biotechnology Laboratory, Biomedical Research Centre, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC135875PMC
http://dx.doi.org/10.1128/jvi.76.4.1578-1587.2002DOI Listing
February 2002