Jason N Berman

Jason N Berman

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Jason N Berman

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Pathologic Features of Down Syndrome Myelodysplastic Syndrome and Acute Myeloid Leukemia: A Report From the Children's Oncology Group Protocol AAML0431.

Arch Pathol Lab Med 2019 Aug 20. Epub 2019 Aug 20.

From the Department of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee (Drs Mast, Mosse, Jones, and Head); the Division of Hematology/Oncology, Children's Hospital of Michigan, Wayne State University, Detroit (Dr Taub); the Department of Biostatistics, University of Southern California, Monrovia (Dr Alonzo and Mr Wang); the Division of Hematology/Oncology/Bone Marrow Transplantation, Children's Mercy Hospital, Kansas City, Missouri (Dr Gamis); the Pathology and Laboratory Medicine Service, VA Tennessee Valley Healthcare System, Nashville (Dr Mosse); the Department of Pediatrics, University of New Mexico, Albuquerque (Dr Mathew); the Division of Hematology-Oncology, IWK Health Centre, Halifax, Nova Scotia, Canada (Dr Berman); the Departments of Oncology (Dr Campana and Ms Coustan-Smith) and Pathology (Dr Raimondi), St. Jude Children's Research Hospital, Memphis, Tennessee; the Department of Pediatrics, Yong Loo Lin School of Medicine, National University of Singapore, The National University Cancer Institute, NUH Medical Centre, Singapore (Dr Campana and Ms Coustan-Smith); the Department of Laboratory Medicine and Pathology, University of Minnesota Medical School, Minneapolis (Dr Hirsch); the Department of Pediatrics, University of Toronto, Toronto, Ontario, Canada (Dr Hitzler); and the Division of Hematology/Oncology, The Hospital for Sick Children Developmental and Stem Cell Biology, The Hospital for Sick Children Research Institute, Toronto, Ontario, Canada (Dr Hitzler). Dr Mast now has a joint appointment at the Pathology and Laboratory Medicine Service, VA Tennessee Valley Healthcare System, Nashville. Dr Mathew is currently at the Department of Pediatrics, Presbyterian Health Services, Albuquerque, New Mexico. Dr Berman is currently at the Department of Pediatrics, Dalhousie University, Halifax, Nova Scotia, Canada. Dr Jones is currently at Pathgroup Labs, Nashville, Tennessee. Dr Campana is no longer at the Department of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee. Ms Coustan-Smith is no longer at the Department of Oncology, St. Jude Children's Research Hospital, Memphis, Tennessee.

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http://dx.doi.org/10.5858/arpa.2018-0526-OADOI Listing
August 2019

New Developments in CRISPR/Cas-based Functional Genomics and their Implications for Research Using Zebrafish.

Curr Gene Ther 2017 ;17(4):286-300

Department of Pediatrics, Dalhousie University, Halifax, Nova Scotia, Canada.

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http://dx.doi.org/10.2174/1566523217666171121164132DOI Listing
April 2019

Fats enhance stem cell emergence.

Science 2019 03;363(6431):1041-1042

Department of Microbiology and Immunology, Dalhousie University, Halifax, NS, Canada.

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http://dx.doi.org/10.1126/science.aaw7059DOI Listing
March 2019

Zebrafish knock-ins swim into the mainstream.

Dis Model Mech 2018 10 24;11(10). Epub 2018 Oct 24.

Department of Pediatrics, Dalhousie University, IWK Health Centre, Halifax, NS B3K 6R8, Canada

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http://dmm.biologists.org/lookup/doi/10.1242/dmm.037515
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http://dx.doi.org/10.1242/dmm.037515DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6215421PMC
October 2018

Optimized knock-in of point mutations in zebrafish using CRISPR/Cas9.

Nucleic Acids Res 2018 09;46(17):9252

Departments of Pediatrics, Microbiology & Immunology, and Pathology, Dalhousie University, Halifax, NS, B3H 4R2, Canada.

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http://dx.doi.org/10.1093/nar/gky674DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158599PMC
September 2018

Modeling Leukemogenesis in the Zebrafish Using Genetic and Xenograft Models.

Methods Mol Biol 2016 ;1451:171-89

Department of Microbiology and Immunology, Dalhousie University, Halifax, Canada, B3H 4R2.

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http://dx.doi.org/10.1007/978-1-4939-3771-4_12DOI Listing
January 2018

Phloridzin docosahexaenoate, a novel flavonoid derivative, suppresses growth and induces apoptosis in T-cell acute lymphoblastic leukemia cells.

Am J Cancer Res 2017 1;7(12):2452-2464. Epub 2017 Dec 1.

Department of Plant, Food, & Environmental Sciences, Faculty of Agriculture, Dalhousie UniversityTruro, NS B2N 5E3, Canada.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5752686PMC
December 2017

Validation of PAPSS1 (3'-phosphoadenosine 5'-phosphosulfate synthase 1) as a Cisplatin-sensitizing Therapeutic Target.

Clin Cancer Res 2017 Nov 8;23(21):6555-6566. Epub 2017 Aug 8.

Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada.

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http://dx.doi.org/10.1158/1078-0432.CCR-17-0700DOI Listing
November 2017

FISH identifies a KAT6A/CREBBP fusion caused by a cryptic insertional t(8;16) in a case of spontaneously remitting congenital acute myeloid leukemia with a normal karyotype.

Pediatr Blood Cancer 2017 Aug 18;64(8). Epub 2017 Jan 18.

Department of Pediatrics, IWK Health Centre/Dalhousie University, Halifax, Nova Scotia, Canada.

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http://dx.doi.org/10.1002/pbc.26450DOI Listing
August 2017

A rapid and effective method for screening, sequencing and reporter verification of engineered frameshift mutations in zebrafish.

Dis Model Mech 2017 06 9;10(6):811-822. Epub 2017 Mar 9.

Department of Pediatrics, Dalhousie University, Halifax, NS, Canada B3K 6R8

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http://dx.doi.org/10.1242/dmm.026765DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5483001PMC
June 2017

Using zebrafish models of leukemia to streamline drug screening and discovery.

Exp Hematol 2017 Jan 6;45:1-9. Epub 2016 Oct 6.

Department of Pediatrics, IWK Health Centre, Halifax, Nova Scotia, Canada; Departments of Microbiology and Immunology and Pathology, Dalhousie University, Halifax, Nova Scotia, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.exphem.2016.09.012DOI Listing
January 2017

Roles for APRIN (PDS5B) in homologous recombination and in ovarian cancer prediction.

Nucleic Acids Res 2016 12 24;44(22):10879-10897. Epub 2016 Oct 24.

Genome Stability Laboratory, CHU de Québec Research Center, HDQ Pavilion, Oncology Axis, 9 McMahon, Québec City, QC G1R 2J6, Canada

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http://dx.doi.org/10.1093/nar/gkw921DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159559PMC
December 2016

The Zebrafish Xenograft Platform: Evolution of a Novel Cancer Model and Preclinical Screening Tool.

Adv Exp Med Biol 2016 ;916:289-314

Department of Microbiology and Immunology, Dalhousie University, Halifax, NS, Canada, B3H 4R2.

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http://dx.doi.org/10.1007/978-3-319-30654-4_13DOI Listing
September 2016

Insert, remove or replace: A highly advanced genome editing system using CRISPR/Cas9.

Biochim Biophys Acta 2016 09 24;1863(9):2333-44. Epub 2016 Jun 24.

Division of Plant Biotechnology, Entomology Research Institute, Loyola College, Chennai, India; International Scientific Partnership Program, Deanship of Scientific Research, College of Science, King Saud University, Riyadh, Saudi Arabia. Electronic address:

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http://dx.doi.org/10.1016/j.bbamcr.2016.06.009DOI Listing
September 2016

Characterization of the Zebrafish Homolog of β-Glucosidase 2: A Target of the Drug Miglustat.

Zebrafish 2016 06 24;13(3):177-87. Epub 2016 Feb 24.

1 Department of Pediatrics, Atlantic Research Centre, Dalhousie University , Halifax, Canada .

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http://www.liebertpub.com/doi/10.1089/zeb.2015.1152
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http://dx.doi.org/10.1089/zeb.2015.1152DOI Listing
June 2016

A Guide to Computational Tools and Design Strategies for Genome Editing Experiments in Zebrafish Using CRISPR/Cas9.

Zebrafish 2016 Feb 18;13(1):70-3. Epub 2015 Dec 18.

1 Department of Pediatrics, Dalhousie University , Halifax, Nova Scotia, Canada .

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http://dx.doi.org/10.1089/zeb.2015.1158DOI Listing
February 2016

CRISPR multitargeter: a web tool to find common and unique CRISPR single guide RNA targets in a set of similar sequences.

PLoS One 2015 5;10(3):e0119372. Epub 2015 Mar 5.

Department of Pediatrics, Dalhousie University, Halifax, Nova Scotia, Canada; Department of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia, Canada; Department of Pathology, Dalhousie University, Halifax, Nova Scotia, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0119372PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4351176PMC
January 2016

Bone marrow failure and developmental delay caused by mutations in poly(A)-specific ribonuclease (PARN).

J Med Genet 2015 Nov 4;52(11):738-48. Epub 2015 Sep 4.

Genetics and Genome Biology Program, Research Institute, The Hospital for Sick Children, Toronto, Ontario, Canada Institute of Medical Science, University of Toronto, Toronto, Ontario, Canada Department of Paediatrics, The Hospital for Sick Children, Toronto, Ontario, Canada.

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http://dx.doi.org/10.1136/jmedgenet-2015-103292DOI Listing
November 2015

Mast cell development and function in the zebrafish.

Methods Mol Biol 2015 ;1220:29-57

IWK Health Centre, Dalhousie University, 9700, 5850/5980 University Avenue, Halifax, NS, Canada, B3K 6R8.

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http://dx.doi.org/10.1007/978-1-4939-1568-2_3DOI Listing
June 2015

Translational Activation of HIF1α by YB-1 Promotes Sarcoma Metastasis.

Cancer Cell 2015 May;27(5):682-97

Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, BC V6T 2B5, Canada; Department of Molecular Oncology, British Columbia Cancer Research Center, Vancouver, BC V5Z 1L3, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2015.04.003DOI Listing
May 2015

Hematopoietic neck lesions.

Atlas Oral Maxillofac Surg Clin North Am 2015 Mar 8;23(1):31-7. Epub 2014 Dec 8.

Department of Pediatrics, IWK Health Centre, Dalhousie University, 1348 Summer Street, Halifax, Nova Scotia B3H 4R2, Canada; Clinician Investigator Program and Clinician Scientist Graduate Program, IWK Health Centre, Dalhousie University, 1348 Summer Street, Halifax, Nova Scotia B3H 4R2, Canada; Division of Hematology/Oncology, IWK Health Centre, Dalhousie University, 1348 Summer Street, Halifax, Nova Scotia B3H 4R2, Canada; Department of Microbiology and Immunology, IWK Health Centre, Dalhousie University, 1348 Summer Street, Halifax, Nova Scotia B3H 4R2, Canada; Department of Pathology, IWK Health Centre, Dalhousie University, 1348 Summer Street, Halifax, Nova Scotia B3H 4R2, Canada.

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http://dx.doi.org/10.1016/j.cxom.2014.10.004DOI Listing
March 2015

A transgenic zebrafish model expressing KIT-D816V recapitulates features of aggressive systemic mastocytosis.

Br J Haematol 2014 Oct 2;167(1):48-61. Epub 2014 Jul 2.

Department of Pediatrics, IWK Health Centre, Halifax, NS, Canada; Department of Medical Genetics, University of Ottawa, Ottawa, ON, Canada.

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http://dx.doi.org/10.1111/bjh.12999DOI Listing
October 2014

The progress and promise of zebrafish as a model to study mast cells.

Dev Comp Immunol 2014 Sep 6;46(1):74-83. Epub 2014 Feb 6.

Department of Pediatrics, Dalhousie University, IWK Health Centre, Halifax, NS B3K 6R8, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.dci.2014.01.023DOI Listing
September 2014

Optimized cell transplantation using adult rag2 mutant zebrafish.

Nat Methods 2014 Aug 20;11(8):821-4. Epub 2014 Jul 20.

1] Molecular Pathology Unit, Massachusetts General Hospital, Boston, Massachusetts, USA. [2] Cancer Center, Massachusetts General Hospital, Boston, Massachusetts, USA. [3] Center for Regenerative Medicine, Massachusetts General Hospital, Boston, Massachusetts, USA. [4] Harvard Stem Cell Institute, Cambridge, Massachusetts, USA. [5].

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https://dash.harvard.edu/bitstream/handle/1/14065308/4294527
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http://www.nature.com/doifinder/10.1038/nmeth.3031
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http://dx.doi.org/10.1038/nmeth.3031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4294527PMC
August 2014

Hooking the big one: the potential of zebrafish xenotransplantation to reform cancer drug screening in the genomic era.

Dis Model Mech 2014 Jul;7(7):745-54

Department of Pediatrics, IWK Health Centre, PO Box 9700, 5850/5980 University Avenue, Halifax, NS, B3K 6R8, Canada. Life Sciences Research Institute, Faculty of Medicine, Dalhousie University, 1348 Summer Street, Halifax, NS, B3H 4R2, Canada. Department of Pathology, Dalhousie University, Sir Charles Tupper Medical Building, 5850 College Street, Halifax, NS, B3H 4R2. Department of Microbiology and Immunology, Dalhousie University, Sir Charles Tupper Medical Building, 5850 College Street, Halifax, NS, B3H 4R2, Canada.

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http://dx.doi.org/10.1242/dmm.015784DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4073264PMC
July 2014

Zebrafish as a model system for mitochondrial biology and diseases.

Transl Res 2014 Feb 20;163(2):79-98. Epub 2013 Sep 20.

Department of Pediatrics, Dalhousie University, IWK Health Centre, Halifax, Nova Scotia, Canada. Electronic address:

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http://dx.doi.org/10.1016/j.trsl.2013.08.008DOI Listing
February 2014

Calcineurin-Rcan1 interaction contributes to stem cell factor-mediated mast cell activation.

J Immunol 2013 Dec 11;191(12):5885-94. Epub 2013 Nov 11.

Department of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3K 6R8, Canada.

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http://dx.doi.org/10.4049/jimmunol.1301271DOI Listing
December 2013

Syntaxin binding protein 1 is not required for allergic inflammation via IgE-mediated mast cell activation.

PLoS One 2013 6;8(3):e58560. Epub 2013 Mar 6.

Department of Microbiology and Immunology, Dalhousie University and IWK Health Centre, Halifax, Nova Scotia, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0058560PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3590206PMC
September 2013

Mast cell FcεRI-induced early growth response 2 regulates CC chemokine ligand 1-dependent CD4+ T cell migration.

J Immunol 2013 May 27;190(9):4500-7. Epub 2013 Mar 27.

Department of Microbiology and Immunology, Dalhousie University and Izaak Walton Killam Health Centre, Halifax, Nova Scotia B3K 6R8, Canada.

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http://dx.doi.org/10.4049/jimmunol.1203158DOI Listing
May 2013

Investigations regarding the utility of prodigiosenes to treat leukemia.

Org Biomol Chem 2013 Jan;11(1):62-8

Department of Chemistry, Dalhousie University, Halifax, Nova Scotia B4P 2R6, Canada.

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http://dx.doi.org/10.1039/c2ob26535dDOI Listing
January 2013

Myelopoiesis and myeloid leukaemogenesis in the zebrafish.

Adv Hematol 2012 19;2012:358518. Epub 2012 Jul 19.

Department of Microbiology and Immunology, Dalhousie University, Halifax, NS, Canada B3H 3J5.

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http://dx.doi.org/10.1155/2012/358518DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3407620PMC
August 2012

Zebrafish xenografts as a tool for in vivo studies on human cancer.

Ann N Y Acad Sci 2012 Aug;1266:124-37

Department of Hematology and Oncology, University of Tübingen Medical Center II, Tübingen, Germany.

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http://www.researchgate.net/profile/Martina_Konantz/publicat
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http://doi.wiley.com/10.1111/j.1749-6632.2012.06575.x
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http://dx.doi.org/10.1111/j.1749-6632.2012.06575.xDOI Listing
August 2012

Using MS-MLPA as an efficient screening tool for detecting 9p21 abnormalities in pediatric acute lymphoblastic leukemia.

Pediatr Blood Cancer 2012 Jun 27;58(6):852-9. Epub 2011 Jul 27.

Department of Microbiology and Immunology, IWK Health Centre/Dalhousie University, Halifax, NS, Canada.

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http://dx.doi.org/10.1002/pbc.23285DOI Listing
June 2012

The zebrafish reveals dependence of the mast cell lineage on Notch signaling in vivo.

Blood 2012 Apr 24;119(15):3585-94. Epub 2012 Feb 24.

Izaak Walton Killam Health Centre, Dalhousie University, Halifax, NS, Canada.

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http://dx.doi.org/10.1182/blood-2011-10-385989DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3375148PMC
April 2012

Leukaemia xenotransplantation in zebrafish--chemotherapy response assay in vivo.

Br J Haematol 2011 Jun 22;153(6):786-9. Epub 2011 Apr 22.

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http://dx.doi.org/10.1111/j.1365-2141.2011.08661.xDOI Listing
June 2011

Regulation of S100A10 by the PML-RAR-α oncoprotein.

Blood 2011 Apr 10;117(15):4095-105. Epub 2011 Feb 10.

Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, NS, USA.

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http://dx.doi.org/10.1182/blood-2010-07-298851DOI Listing
April 2011

Zebrafish mast cells possess an FcɛRI-like receptor and participate in innate and adaptive immune responses.

Dev Comp Immunol 2011 Jan 19;35(1):125-34. Epub 2010 Sep 19.

IWK Health Centre, Dalhousie University, PO Box 9700, 5850/5980 University Avenue, Halifax, NS B3K 6R8, Canada.

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http://dx.doi.org/10.1016/j.dci.2010.09.001DOI Listing
January 2011

The Hox cofactors Meis1 and Pbx act upstream of gata1 to regulate primitive hematopoiesis.

Dev Biol 2010 Apr 1;340(2):306-17. Epub 2010 Feb 1.

Department of Biological Sciences, University of Alberta, Edmonton, Canada.

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http://dx.doi.org/10.1016/j.ydbio.2010.01.033DOI Listing
April 2010

Rcan1 negatively regulates Fc epsilonRI-mediated signaling and mast cell function.

J Exp Med 2009 Jan 5;206(1):195-207. Epub 2009 Jan 5.

Department of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3K 6R8, Canada.

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http://dx.doi.org/10.1084/jem.20081140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2626669PMC
January 2009

JAK2 V617F positive polycythemia Vera in a child with neurofibromatosis type I.

Pediatr Blood Cancer 2008 Nov;51(5):689-91

Dalhousie Cancer Genetics Research Group, Department of Pediatrics, Dalhousie University, Halifax, Nova Scotia, Canada.

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http://dx.doi.org/10.1002/pbc.21659DOI Listing
November 2008

TRAF6 specifically contributes to FcepsilonRI-mediated cytokine production but not mast cell degranulation.

J Biol Chem 2008 Nov 4;283(46):32110-8. Epub 2008 Sep 4.

Department of Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3K 6R8, Canada.

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http://dx.doi.org/10.1074/jbc.M802610200DOI Listing
November 2008

Routine bone marrow examination in the initial evaluation of paediatric Hodgkin lymphoma: the Canadian perspective.

Br J Haematol 2008 Jun 18;141(6):820-6. Epub 2008 Apr 18.

Department of Paediatrics, Dalhousie University, and IWK Health Centre, Halifax, NS, Canada.

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http://dx.doi.org/10.1111/j.1365-2141.2008.07094.xDOI Listing
June 2008

Targeting transcription factors in acute leukemia in children.

Curr Drug Targets 2007 Jun;8(6):727-37

Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, MA 02115, USA.

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http://dx.doi.org/10.2174/138945007780830818DOI Listing
June 2007

Current and future approaches for the therapeutic targeting of metastasis (review).

Int J Mol Med 2006 Dec;18(6):1025-36

Department of Microbiology and Immunology, Faculty of Medicine, Dalhousie University, Sir Charles Tupper Medical Building, Nova Scotia B3H 1X5, Canada.

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December 2006

Zebrafish as a model for myelopoiesis during embryogenesis.

Exp Hematol 2005 Sep;33(9):997-1006

Department of Pediatric Oncology, Dana-Farber Cancer Institute and Harvard Medical School, Boston, Mass. 02115, USA.

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http://dx.doi.org/10.1016/j.exphem.2005.06.010DOI Listing
September 2005

CD34+ cell selection is required to assess HOXA9 expression levels in patients with myelodysplastic syndrome.

Br J Haematol 2005 Jul;130(1):83-6

Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.

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http://dx.doi.org/10.1111/j.1365-2141.2005.05555.xDOI Listing
July 2005

The pu.1 promoter drives myeloid gene expression in zebrafish.

Blood 2004 Sep 2;104(5):1291-7. Epub 2004 Mar 2.

Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.

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http://dx.doi.org/10.1182/blood-2003-09-3105DOI Listing
September 2004