Publications by authors named "Jason Ernst"

Nat Commun 2020 12 2;11(1):6168. Epub 2020 Dec 2.

Computer Science Department, University of California, Los Angeles, Los Angeles, CA, 90095, USA.

bioRxiv 2020 Jul 14. Epub 2020 Jul 14.

Nat Commun 2020 Apr 1;11(1):1715. Epub 2020 Apr 1.

Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.

PLoS Genet 2019 12 13;15(12):e1008481. Epub 2019 Dec 13.

Computer Science Department, University of California Los Angeles, Los Angeles, California, United States of America.

Bioinformatics 2020 03;36(6):1704-1711

Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA 90095, USA.

Commun Biol 2019 2;2:248. Epub 2019 Jul 2.

1Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA 90095 USA.

Nat Commun 2018 09 7;9(1):3634. Epub 2018 Sep 7.

Department of Orthopaedic Surgery, Keck School of Medicine of USC, University of Southern California (USC), Los Angeles, CA, 90033, USA.

Nat Commun 2018 08 23;9(1):3493. Epub 2018 Aug 23.

Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.

Nat Commun 2018 08 23;9(1):3391. Epub 2018 Aug 23.

Center for Genomic Medicine and Cardiovascular Research Center, Massachusetts General Hospital, Boston, MA, 02114, USA.

Genome Biol 2018 08 14;19(1):114. Epub 2018 Aug 14.

Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, 90095, USA.

Genome Biol 2018 08 10;19(1):109. Epub 2018 Aug 10.

Bioinformatics Interdepartmental Program, University of California, Los Angeles, CA, USA.

Nat Commun 2018 07 4;9(1):2606. Epub 2018 Jul 4.

Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.

Nat Commun 2018 02 21;9(1):754. Epub 2018 Feb 21.

Division of Cardiology, Department of Internal Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, 90095, USA.

Nat Protoc 2017 Dec 9;12(12):2478-2492. Epub 2017 Nov 9.

Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.

Genome Biol 2017 10 20;18(1):193. Epub 2017 Oct 20.

Computer Science and Artificial Intelligence Lab (CSAIL), Massachusetts Institute of Technology, Massachusetts, USA.

Cell Rep 2017 04;19(4):875-889

Division of Cancer Medicine, Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77054, USA. Electronic address:

Cell 2017 01 19;168(3):442-459.e20. Epub 2017 Jan 19.

David Geffen School of Medicine, Department of Biological Chemistry, University of California Los Angeles, Los Angeles, CA 90095, USA; Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, Bioinformatics Program, Los Angeles, CA 90095, USA. Electronic address:

Nat Biotechnol 2016 Nov 3;34(11):1180-1190. Epub 2016 Oct 3.

Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, Massachusetts, USA.

Nature 2016 10 19;538(7626):523-527. Epub 2016 Oct 19.

Department of Neurology, Center for Autism Research and Treatment, Semel Institute, David Geffen School of Medicine, University of California Los Angeles, California 90095, USA.

Physiol Genomics 2016 09 5;48(9):677-87. Epub 2016 Aug 5.

Department of Physiology and Biomedical Engineering, Mayo Clinic School of Medicine, Mayo Clinic Rochester, Rochester, Minnesota; Department of Medicine, Division of Endocrinology, University of California Los Angeles, David Geffen School of Medicine, Los Angeles, California; and

Bioinformatics 2016 06;32(12):i156-i163

Department of Computer Science Department of Human Genetics, University of California, Los Angeles, CA 90095, USA.

Cancer Discov 2015 Dec 8;5(12):1314-27. Epub 2015 Oct 8.

Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, Texas. Institute for Applied Cancer Science, The University of Texas MD Anderson Cancer Center, Houston, Texas. Institute for Health Transformation, The University of Texas System, Houston, Texas.

Nature 2015 Feb;518(7539):317-30

1] Computer Science and Artificial Intelligence Lab, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, Massachusetts 02139, USA. [2] The Broad Institute of Harvard and MIT, 415 Main Street, Cambridge, Massachusetts 02142, USA.

Nat Biotechnol 2015 Apr 18;33(4):364-76. Epub 2015 Feb 18.

1] MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, Massachusetts, USA. [2] Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.

Nat Neurosci 2014 Sep 17;17(9):1156-63. Epub 2014 Aug 17.

Rush Alzheimer's Disease Center, Rush University Medical Center, Chicago, Illinois, USA.

G3 (Bethesda) 2014 Aug 12;4(11):2051-63. Epub 2014 Aug 12.

Ludwig Institute for Cancer Research, 9500 Gilman Drive, La Jolla, California 92093-0653 Department of Cellular and Molecular Medicine, Institute of Genomic Medicine, and Moores Cancer Center, University of California, San Diego School of Medicine, La Jolla, California 92093

Genome Res 2013 Dec 29;23(12):2136-48. Epub 2013 Oct 29.

Department of Developmental and Cell Biology, University of California, Irvine, California 92697, USA;

Cell Stem Cell 2013 Nov 12;13(5):602-16. Epub 2013 Sep 12.

Department of Biological Chemistry at the David Geffen School of Medicine, Los Angeles, CA, 90095, USA.

Genome Res 2013 Jul 17;23(7):1142-54. Epub 2013 Apr 17.

Department of Biological Chemistry, David Geffen School of Medicine, University of California, Los Angeles, USA.

PLoS Comput Biol 2013 14;9(3):e1002968. Epub 2013 Mar 14.

Ludwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.

Genome Res 2013 May 19;23(5):800-11. Epub 2013 Mar 19.

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.

Nucleic Acids Res 2013 Jan 5;41(2):827-41. Epub 2012 Dec 5.

Department of Genome Sciences, University of Washington, 3720 15th Ave NE, Seattle, WA 98195-5065, USA.

Cell Rep 2012 Nov 21;2(5):1411-24. Epub 2012 Nov 21.

Cancer Research Center, Georgia Health Sciences University, Augusta, GA 30912, USA.

BMC Syst Biol 2012 Aug 16;6:104. Epub 2012 Aug 16.

Ray and Stephanie Lane Center for Computational Biology, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, PA 15213, USA.

PLoS Genet 2012 26;8(4):e1002654. Epub 2012 Apr 26.

Department of Ophthalmology, Harvard Medical School, Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, United States of America.

Cell Res 2012 May 27;22(5):789-90. Epub 2012 Mar 27.

Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA 90095-1737, USA.

Nat Methods 2012 Feb 28;9(3):215-6. Epub 2012 Feb 28.

Cell 2011 Dec;147(7):1628-39

Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA.

Nature 2011 Oct 12;478(7370):476-82. Epub 2011 Oct 12.

Broad Institute of Harvard and Massachusetts Institute of Technology, 7 Cambridge Center, Cambridge, Massachusetts 02142, USA.

Genome Res 2011 Oct 27;21(10):1659-71. Epub 2011 Jul 27.

Center for Comparative Genomics and Bioinformatics, Pennsylvania State University, University Park, Pennsylvania 16802, USA.

PLoS One 2011 18;6(7):e22401. Epub 2011 Jul 18.

Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.

Nature 2011 May 23;473(7345):43-9. Epub 2011 Mar 23.

Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA.

Nature 2011 Mar 22;471(7339):480-5. Epub 2010 Dec 22.

Center for Biomedical Informatics, Harvard Medical School, Boston, Massachusetts 02115, USA.

Science 2010 Dec 22;330(6012):1787-97. Epub 2010 Dec 22.

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology (MIT), Cambridge, MA 02139, USA.

Nat Biotechnol 2010 Aug 25;28(8):817-25. Epub 2010 Jul 25.

MIT Computer Science and Artificial Intelligence Laboratory, Cambridge, Massachusetts, USA.

Genome Res 2010 Apr 10;20(4):526-36. Epub 2010 Mar 10.

Machine Learning Department, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

PLoS One 2009 Oct 15;4(10):e7469. Epub 2009 Oct 15.

Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, Boston, Massachusetts, USA.

PLoS Comput Biol 2008 Mar 28;4(3):e1000044. Epub 2008 Mar 28.

Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.

BMC Syst Biol 2008 Jan 23;2. Epub 2008 Jan 23.

The Simons Center for Systems Biology, Institute for Advanced Study, Princeton, NJ 08540, USA.

Mol Syst Biol 2007 16;3:74. Epub 2007 Jan 16.

Machine Learning Department, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

BMC Bioinformatics 2006 Apr 5;7:191. Epub 2006 Apr 5.

Center for Automated and Learning and Discovery, School of Computer Science, Carnegie Mellon University, Pittsburgh, PA 15213, USA.

Nat Biotechnol 2005 Dec;23(12):1503-8

Dept. Molecular Biology, Hebrew University Medical School, Jerusalem, Israel 91120.

Bioinformatics 2005 Jun;21 Suppl 1:i159-68

Center for Automated Learning and Discovery, School of Computer Science, Carnegie Mellon University 5000 Forbes Avenue, Pittsburgh, PA 15213, USA.