Jan Aerts

Jan Aerts

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Jan Aerts

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GRNBoost2 and Arboreto: efficient and scalable inference of gene regulatory networks.

Bioinformatics 2019 Jun;35(12):2159-2161

Laboratory of Computational Biology, VIB Center for Brain & Disease Research.

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https://academic.oup.com/bioinformatics/advance-article/doi/
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http://dx.doi.org/10.1093/bioinformatics/bty916DOI Listing
June 2019

Predicting disease-causing variant combinations.

Proc Natl Acad Sci U S A 2019 Jun 24;116(24):11878-11887. Epub 2019 May 24.

Interuniversity Institute of Bioinformatics in Brussels, Université Libre de Bruxelles-Vrije Universiteit Brussel, 1050 Brussels, Belgium;

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http://dx.doi.org/10.1073/pnas.1815601116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6575632PMC
June 2019

Candidate gene prioritization with Endeavour.

Nucleic Acids Res 2016 07 30;44(W1):W117-21. Epub 2016 Apr 30.

Department of Electrical Engineering (ESAT), STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics Department, KU Leuven, B-3001 Leuven, Belgium iMinds Future Health Department, KU Leuven, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1093/nar/gkw365DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4987917PMC
July 2016

Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals.

AIDS 2015 Sep;29(15):2045-52

aKU Leuven, Department of Electrical Engineering (ESAT), STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics biMinds Medical IT cKU Leuven, University of Leuven, Department of Microbiology and Immunology, Rega Institute for Medical Research, Clinical and Epidemiological Virology, Leuven, Belgium dPortuguese Society of Rheumatology eLaboratório de Microbiologia Clínica e Biologia Molecular, Serviço de Patologia Clínica, Hospital de Egas Moniz, Centro Hospitalar de Lisboa Ocidental, Rua da Junqueira, Lisbon fCentro de Investigação Interdisciplinar Egas Moniz (CiiEM), Instituto Superior de Ciências da Saúde Sul, Campus Universitário, Quinta da Granja, Monte de Caparica, Caparica, Portugal gDepartment of Biomathematics hDepartment of Human Genetics, David Geffen School of Medicine at UCLA iDepartment of Biostatistics, UCLA Fielding School of Public Health, University of California, Los Angeles, California, USA jGlobal Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, Lsboa, Portugal.

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http://dx.doi.org/10.1097/QAD.0000000000000811DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4570689PMC
September 2015

Highlights from the 5th Symposium on Biological Data Visualization: Part 2.

BMC Proc 2015 13;9(Suppl 6 Proceedings of the 5th Symposium on Biological Data):S1. Epub 2015 Aug 13.

VISUS, University of Stuttgart, Allmandring 19, 70569 Stuttgart, Germany.

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http://dx.doi.org/10.1186/1753-6561-9-S6-S1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4547172PMC
September 2015

Duplication of a promiscuous transcription factor drives the emergence of a new regulatory network.

Nat Commun 2014 Sep 10;5:4868. Epub 2014 Sep 10.

1] Laboratory for Genetics and Genomics, Department M2S, Centre of Microbial and Plant Genetics (CMPG), KU Leuven, B-3001 Leuven, Belgium [2] Laboratory for Systems biology, Vlaams Instituut voor Biotechnologie (VIB), B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1038/ncomms5868DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4172970PMC
September 2014

dendsort: modular leaf ordering methods for dendrogram representations in R.

F1000Res 2014 30;3:177. Epub 2014 Jul 30.

Department of Electrical Engineering (ESAT) STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics, KU Leuven, 3001, Belgium ; iMinds Medical IT, KU Leuven, 3001, Belgium.

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http://dx.doi.org/10.12688/f1000research.4784.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4162509PMC
September 2014

Sequence Diversity Diagram for comparative analysis of multiple sequence alignments.

Authors:
Ryo Sakai Jan Aerts

BMC Proc 2014 28;8(Suppl 2 Proceedings of the 3rd Annual Symposium on Biologica):S9. Epub 2014 Aug 28.

Department of Electrical Engineering (ESAT) STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics, KU Leuven, Kasteelpark Arenberg 10, 3001 Leuven, Belgium ; iMinds Medical IT, Leuven, Belgium.

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http://dx.doi.org/10.1186/1753-6561-8-S2-S9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4155614PMC
September 2014

Annotate-it: a Swiss-knife approach to annotation, analysis and interpretation of single nucleotide variation in human disease.

Genome Med 2012 26;4(9):73. Epub 2012 Sep 26.

KU Leuven, Department of Electrical Engineering-ESAT, SCD-SISTA, Kasteelpark Arenberg 10, B-3001, Leuven, Belgium ; IBBT Future Health Department, Kasteelpark Arenberg 10, B-3001, Leuven, Belgium.

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http://dx.doi.org/10.1186/gm374DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3580443PMC
August 2014

In vitro screening of embryos by whole-genome sequencing: now, in the future or never?

Hum Reprod 2014 Apr 2;29(4):842-51. Epub 2014 Feb 2.

Department of Electrical Engineering (ESAT), STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics, KU Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1093/humrep/deu005DOI Listing
April 2014

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

J Biomed Semantics 2014 Feb 5;5(1). Epub 2014 Feb 5.

Database Center for Life Science, Research Organization of Information and Systems, 2-11-16, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1186/2041-1480-5-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978116PMC
February 2014

eXtasy: variant prioritization by genomic data fusion.

Nat Methods 2013 Nov 29;10(11):1083-4. Epub 2013 Sep 29.

1] Department of Electrical Engineering, STADIUS Center for Dynamical Systems, Signal Processing and Data Analytics, KU Leuven, Leuven, Belgium. [2] iMinds Future Health Department, Leuven, Belgium. [3].

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http://www.nature.com/articles/nmeth.2656
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http://dx.doi.org/10.1038/nmeth.2656DOI Listing
November 2013

Pipit: visualizing functional impacts of structural variations.

Bioinformatics 2013 Sep 25;29(17):2206-7. Epub 2013 Jun 25.

Department of Electrical Engineering-ESAT, KU Leuven, SCD-SISTA, Leuven, Belgium.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btt367DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3740631PMC
September 2013

TrioVis: a visualization approach for filtering genomic variants of parent-child trios.

Bioinformatics 2013 Jul 8;29(14):1801-2. Epub 2013 May 8.

Department of Electrical Engineering-ESAT, KU Leuven, SCD-SISTA, Leuven 3001, Belgium.

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http://dx.doi.org/10.1093/bioinformatics/btt267DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3702247PMC
July 2013

Unraveling genomic variation from next generation sequencing data.

BioData Min 2013 Jul 25;6(1):13. Epub 2013 Jul 25.

Division of Basic Sciences, University of Crete Medical School, Heraklion 71110, Greece.

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http://dx.doi.org/10.1186/1756-0381-6-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3726446PMC
July 2013

Meander: visually exploring the structural variome using space-filling curves.

Nucleic Acids Res 2013 Jun 19;41(11):e118. Epub 2013 Apr 19.

Department of Electrical Engineering (ESAT/SCD), University of Leuven, Kasteelpark Arenberg 10, Box 2446, 3001 Leuven, Belgium.

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http://dx.doi.org/10.1093/nar/gkt254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3675473PMC
June 2013

The Ruby UCSC API: accessing the UCSC genome database using Ruby.

BMC Bioinformatics 2012 Sep 21;13:240. Epub 2012 Sep 21.

Department of Human Genetics, Nagasaki University Graduate School of Biomedical Sciences, 1-12-4 Sakamoto, Nagasaki, Nagasaki, 852-8523, Japan.

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http://dx.doi.org/10.1186/1471-2105-13-240DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3542311PMC
September 2012

Arena3D: visualizing time-driven phenotypic differences in biological systems.

BMC Bioinformatics 2012 Mar 22;13:45. Epub 2012 Mar 22.

Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1, Heidelberg 69117, Germany.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-13-45DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3368716PMC
March 2012

Which clustering algorithm is better for predicting protein complexes?

BMC Res Notes 2011 Dec 20;4:549. Epub 2011 Dec 20.

Bioinformatics & Medical Informatics Team, Biomedical Research Foundation, Academy of Athens, Soranou Efessiou 4, 11527 Athens, Greece.

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http://dx.doi.org/10.1186/1756-0500-4-549DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267700PMC
December 2011

Medusa: A tool for exploring and clustering biological networks.

BMC Res Notes 2011 Oct 6;4:384. Epub 2011 Oct 6.

Katholieke Universiteit Leuven, Faculty of Engineering - ESAT/SCD, Kasteelpark Arenberg 10, 3001 Leuven-Heverlee, Belgium.

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http://dx.doi.org/10.1186/1756-0500-4-384DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3197509PMC
October 2011

A Ruby API to query the Ensembl database for genomic features.

Bioinformatics 2011 Apr 28;27(7):1013-4. Epub 2011 Jan 28.

Parco Tecnologico Padano, Lodi, Italy.

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http://dx.doi.org/10.1093/bioinformatics/btr050DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3065687PMC
April 2011

Using graph theory to analyze biological networks.

BioData Min 2011 Apr 28;4:10. Epub 2011 Apr 28.

Department of Computer Science and Biomedical Informatics, University of Central Greece, Lamia, 35100, Greece.

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http://dx.doi.org/10.1186/1756-0381-4-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3101653PMC
April 2011

BioRuby: bioinformatics software for the Ruby programming language.

Bioinformatics 2010 Oct 25;26(20):2617-9. Epub 2010 Aug 25.

Department of Genome Informatics, Genome Information Research Center, Research Institute for Microbial Diseases, Osaka University, Japan.

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http://dx.doi.org/10.1093/bioinformatics/btq475DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2951089PMC
October 2010

Xenotransplantation by injection of a suspension of isolated preantral ovarian follicles and stroma cells under the kidney capsule of nude mice.

Fertil Steril 2010 Jul 6;94(2):708-14. Epub 2009 May 6.

Department of Veterinary Medicine, Faculty of Pharmaceutical, Biomedical, and Veterinary Sciences, University of Antwerp, Belgium.

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http://dx.doi.org/10.1016/j.fertnstert.2009.03.055DOI Listing
July 2010

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls.

Authors:
Nick Craddock Matthew E Hurles Niall Cardin Richard D Pearson Vincent Plagnol Samuel Robson Damjan Vukcevic Chris Barnes Donald F Conrad Eleni Giannoulatou Chris Holmes Jonathan L Marchini Kathy Stirrups Martin D Tobin Louise V Wain Chris Yau Jan Aerts Tariq Ahmad T Daniel Andrews Hazel Arbury Anthony Attwood Adam Auton Stephen G Ball Anthony J Balmforth Jeffrey C Barrett Inês Barroso Anne Barton Amanda J Bennett Sanjeev Bhaskar Katarzyna Blaszczyk John Bowes Oliver J Brand Peter S Braund Francesca Bredin Gerome Breen Morris J Brown Ian N Bruce Jaswinder Bull Oliver S Burren John Burton Jake Byrnes Sian Caesar Chris M Clee Alison J Coffey John M C Connell Jason D Cooper Anna F Dominiczak Kate Downes Hazel E Drummond Darshna Dudakia Andrew Dunham Bernadette Ebbs Diana Eccles Sarah Edkins Cathryn Edwards Anna Elliot Paul Emery David M Evans Gareth Evans Steve Eyre Anne Farmer I Nicol Ferrier Lars Feuk Tomas Fitzgerald Edward Flynn Alistair Forbes Liz Forty Jayne A Franklyn Rachel M Freathy Polly Gibbs Paul Gilbert Omer Gokumen Katherine Gordon-Smith Emma Gray Elaine Green Chris J Groves Detelina Grozeva Rhian Gwilliam Anita Hall Naomi Hammond Matt Hardy Pile Harrison Neelam Hassanali Husam Hebaishi Sarah Hines Anne Hinks Graham A Hitman Lynne Hocking Eleanor Howard Philip Howard Joanna M M Howson Debbie Hughes Sarah Hunt John D Isaacs Mahim Jain Derek P Jewell Toby Johnson Jennifer D Jolley Ian R Jones Lisa A Jones George Kirov Cordelia F Langford Hana Lango-Allen G Mark Lathrop James Lee Kate L Lee Charlie Lees Kevin Lewis Cecilia M Lindgren Meeta Maisuria-Armer Julian Maller John Mansfield Paul Martin Dunecan C O Massey Wendy L McArdle Peter McGuffin Kirsten E McLay Alex Mentzer Michael L Mimmack Ann E Morgan Andrew P Morris Craig Mowat Simon Myers William Newman Elaine R Nimmo Michael C O'Donovan Abiodun Onipinla Ifejinelo Onyiah Nigel R Ovington Michael J Owen Kimmo Palin Kirstie Parnell David Pernet John R B Perry Anne Phillips Dalila Pinto Natalie J Prescott Inga Prokopenko Michael A Quail Suzanne Rafelt Nigel W Rayner Richard Redon David M Reid Renwick Susan M Ring Neil Robertson Ellie Russell David St Clair Jennifer G Sambrook Jeremy D Sanderson Helen Schuilenburg Carol E Scott Richard Scott Sheila Seal Sue Shaw-Hawkins Beverley M Shields Matthew J Simmonds Debbie J Smyth Elilan Somaskantharajah Katarina Spanova Sophia Steer Jonathan Stephens Helen E Stevens Millicent A Stone Zhan Su Deborah P M Symmons John R Thompson Wendy Thomson Mary E Travers Clare Turnbull Armand Valsesia Mark Walker Neil M Walker Chris Wallace Margaret Warren-Perry Nicholas A Watkins John Webster Michael N Weedon Anthony G Wilson Matthew Woodburn B Paul Wordsworth Allan H Young Eleftheria Zeggini Nigel P Carter Timothy M Frayling Charles Lee Gil McVean Patricia B Munroe Aarno Palotie Stephen J Sawcer Stephen W Scherer David P Strachan Chris Tyler-Smith Matthew A Brown Paul R Burton Mark J Caulfield Alastair Compston Martin Farrall Stephen C L Gough Alistair S Hall Andrew T Hattersley Adrian V S Hill Christopher G Mathew Marcus Pembrey Jack Satsangi Michael R Stratton Jane Worthington Panos Deloukas Audrey Duncanson Dominic P Kwiatkowski Mark I McCarthy Willem Ouwehand Miles Parkes Nazneen Rahman John A Todd Nilesh J Samani Peter Donnelly

Nature 2010 Apr;464(7289):713-20

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http://dx.doi.org/10.1038/nature08979DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2892339PMC
April 2010

An introduction to scripting in Ruby for biologists.

Authors:
Jan Aerts Andy Law

BMC Bioinformatics 2009 Jul 16;10:221. Epub 2009 Jul 16.

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http://dx.doi.org/10.1186/1471-2105-10-221DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2722653PMC
July 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

Genomic analysis reveals extensive gene duplication within the bovine TRB locus.

BMC Genomics 2009 Apr 24;10:192. Epub 2009 Apr 24.

The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush, Roslin, EH25 9RG, UK.

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http://dx.doi.org/10.1186/1471-2164-10-192DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685407PMC
April 2009

Follicle survival and growth to antral stages in short-term murine ovarian cortical transplants after Cryologic solid surface vitrification or slow-rate freezing.

Cryobiology 2008 Oct 7;57(2):163-9. Epub 2008 Aug 7.

Faculty of Pharmaceutical, Biomedical and Veterinary Sciences, Department of Veterinary Medicine, Laboratory of Veterinary Physiology, University of Antwerp, Universiteitsplein 1, 2610 Wilrijk, Belgium.

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http://dx.doi.org/10.1016/j.cryobiol.2008.07.011DOI Listing
October 2008

Development and practical applications of a method for repeated transvaginal, ultrasound-guided biopsy collection of the bovine ovary.

Theriogenology 2005 Sep 23;64(4):947-57. Epub 2005 Mar 23.

University of Antwerp, Faculty of Pharmaceutical, Biomedical and Veterinary Sciences, Laboratory of Veterinary Physiology, Universiteitsplein 1, Gebouw U, 2610 Wilrijk, Antwerp, Belgium.

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http://dx.doi.org/10.1016/j.theriogenology.2005.01.011DOI Listing
September 2005

POSA: perl objects for DNA sequencing data analysis.

BMC Genomics 2004 Aug 27;5(1):60. Epub 2004 Aug 27.

Animal Breeding and Genetics Group, Wageningen University, PO Box 338, 6700AH Wageningen, Netherlands.

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http://dx.doi.org/10.1186/1471-2164-5-60DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC516770PMC
August 2004

Data mining of public SNP databases for the selection of intragenic SNPs.

Hum Mutat 2002 Sep;20(3):162-73

Department Pharmacogenomics, Janssen Research Foundation, Beerse, Belgium.

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http://doi.wiley.com/10.1002/humu.10107
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http://dx.doi.org/10.1002/humu.10107DOI Listing
September 2002