Publications by authors named "James T Morton"

41Publications

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules.

Genome Res 2021 Jan 25;31(1):64-74. Epub 2020 Nov 25.

Genomic Medicine Group, J. Craig Venter Institute, La Jolla, California 92037, USA.

View Article and Find Full Text PDF
January 2021

Visualizing 'omic feature rankings and log-ratios using Qurro.

NAR Genom Bioinform 2020 Jun 28;2(2):lqaa023. Epub 2020 Apr 28.

Department of Computer Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA.

View Article and Find Full Text PDF
June 2020

Metabolome-Informed Microbiome Analysis Refines Metadata Classifications and Reveals Unexpected Medication Transfer in Captive Cheetahs.

mSystems 2020 Mar 10;5(2). Epub 2020 Mar 10.

Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California, USA.

View Article and Find Full Text PDF
March 2020

Establishing microbial composition measurement standards with reference frames.

Nat Commun 2019 06 20;10(1):2719. Epub 2019 Jun 20.

Department of Pediatrics, University of California, San Diego, La Jolla, CA, 92093, USA.

View Article and Find Full Text PDF
June 2019

Red Sea SAR11 and Single-Cell Genomes Reflect Globally Distributed Pangenomes.

Appl Environ Microbiol 2019 07 17;85(13). Epub 2019 Jun 17.

Red Sea Research Center, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia

View Article and Find Full Text PDF
July 2019

A Novel Sparse Compositional Technique Reveals Microbial Perturbations.

mSystems 2019 Jan-Feb;4(1). Epub 2019 Feb 12.

Department of Pediatrics, University of California San Diego, La Jolla, California, USA.

View Article and Find Full Text PDF
February 2019

Calour: an Interactive, Microbe-Centric Analysis Tool.

mSystems 2019 Jan-Feb;4(1). Epub 2019 Jan 29.

Department of Pediatrics, University of California San Diego, La Jolla, California, USA.

View Article and Find Full Text PDF
January 2019