Publications by authors named "James R Johnson"

100Publications

Recurrent Herpes Zoster.

Authors:
James R Johnson

J Infect Dis 2020 Nov 27. Epub 2020 Nov 27.

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November 2020

Bacterial "Virulence" Traits and Host Demographics Predict Colonization Behaviors Within Households.

Open Forum Infect Dis 2020 Nov 22;7(11):ofaa495. Epub 2020 Oct 22.

Infectious Diseases, Veterans Affairs Medical Center, Minneapolis, Minnesota, USA.

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November 2020

Companion Animals Are Spillover Hosts of the Multidrug-Resistant Human Extraintestinal Pandemic Clones ST131 and ST1193.

Front Microbiol 2020 2;11:1968. Epub 2020 Sep 2.

Australian Centre for Antimicrobial Resistance Ecology, School of Animal and Veterinary Sciences, The University of Adelaide, Roseworthy, SA, Australia.

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September 2020

Peptidoglycan Sensing Prevents Quiescence and Promotes Quorum-Independent Colony Growth of Uropathogenic Escherichia coli.

J Bacteriol 2020 Sep 23;202(20). Epub 2020 Sep 23.

Department of Cell & Molecular Biology, The University of Rhode Island, Kingston, Rhode Island, USA

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September 2020

Genotyping of Escherichia coli Isolates for Extraintestinal Virulence Genes by Use of Whole-Genome Sequencing Data.

J Clin Microbiol 2020 Sep 22;58(10). Epub 2020 Sep 22.

The International Centre for Reference and Research on Escherichia and Klebsiella, Department of Bacteria, Parasites and Fungi, Statens Serum Institut, Copenhagen, Denmark

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September 2020

A novel ergonomic wheelchair reduces bacterial hand contamination.

Disabil Rehabil Assist Technol 2020 Jul 3:1-4. Epub 2020 Jul 3.

Minneapolis Veterans Affairs Health Care System, Minneapolis, MN, USA.

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July 2020

Genomic analysis of fluoroquinolone-susceptible phylogenetic group B2 extraintestinal pathogenic Escherichia coli causing infections in cats.

Vet Microbiol 2020 Jun 18;245:108685. Epub 2020 Apr 18.

School of Animal and Veterinary Sciences, The University of Adelaide, Roseworthy, SA, Australia; Australian Centre for Antimicrobial Resistance Ecology, School of Animal and Veterinary Sciences, The University of Adelaide, Adelaide, SA, Australia.

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June 2020

Epidemiology of Escherichia coli Bacteremia: A Systematic Literature Review.

Clin Infect Dis 2020 May 14. Epub 2020 May 14.

Bacterial Vaccines Discovery and Early Development, Janssen Vaccines and Prevention B.V., Leiden, The Netherlands.

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May 2020

Activity of ceftazidime-avibactam against Escherichia coli isolates from U.S. veterans (2011) in relation to co-resistance and sequence type 131 (ST131) H30 and H30Rx status.

Diagn Microbiol Infect Dis 2020 Jul 10;97(3):115034. Epub 2020 Mar 10.

VA Medical Center, Minneapolis, MN; University of Minnesota, Minneapolis, MN.

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July 2020

Infectious Pneumorachis Due to Clostridium septicum.

J Gen Intern Med 2020 Jul 16;35(7):2197-2198. Epub 2020 Apr 16.

Infectious Diseases, Minneapolis VA Medical Center, 1 Veteran Drive, Minneapolis, MN, 55417, USA.

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July 2020

Antimicrobial Decision-Making and Stewardship.

Authors:
James R Johnson

Clin Infect Dis 2020 Jul;71(3):700

Minneapolis Veterans Affairs Medical Center and University of Minnesota, Minneapolis, Minnesota, USA.

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July 2020

Analysis of urine-specific antibiograms from veterans to guide empiric therapy for suspected urinary tract infection.

Diagn Microbiol Infect Dis 2019 Dec 30;95(4):114874. Epub 2019 Jul 30.

University of Minnesota, Minneapolis, MN, USA; Minneapolis Veterans Affairs Medical Center, Minneapolis, MN, USA.

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December 2019

Inactivation of extraintestinal pathogenic E. coli clinical and food isolates suspended in ground chicken meat by gamma radiation.

Food Microbiol 2019 Dec 12;84:103264. Epub 2019 Jul 12.

U.S. Department of Agriculture, Agricultural Research Service, Eastern Regional Research Center, 600 East Mermaid Lane, Wyndmoor, Pennsylvania, 19038, USA. Electronic address:

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December 2019

Predictive characteristics of methicillin-resistant Staphylococcus aureus nares screening tests for methicillin resistance among S. aureus clinical isolates from hospitalized veterans.

Infect Control Hosp Epidemiol 2019 05 15;40(5):603-605. Epub 2019 Apr 15.

Division of Infectious Diseases and International Medicine,University of Minnesota,Minneapolis, Minnesota.

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May 2019

Survey of US wastewater for carbapenem-resistant Enterobacteriaceae.

J Water Health 2019 Apr;17(2):219-226

National Risk Management Research Laboratory, Office of Research and Development, United States Environmental Protection Agency, Cincinnati, OH 45268, USA E-mail:

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April 2019

Analysis of mutational patterns in quinolone resistance-determining regions of GyrA and ParC of clinical isolates.

Int J Antimicrob Agents 2019 Mar 21;53(3):318-324. Epub 2018 Dec 21.

Department of Biochemistry, Molecular Biology and Biophysics, Biotechnology Institute, University of Minnesota, St Paul, MN, USA. Electronic address:

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March 2019

Cost-effectiveness of pre-operative Staphylococcus aureus screening and decolonization.

Infect Control Hosp Epidemiol 2018 11 20;39(11):1340-1346. Epub 2018 Sep 20.

2Division of Epidemiology, University of Minnesota School of Public Health,Minneapolis,Minnesota.

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November 2018

Escherichia coli ST131-22 as a Foodborne Uropathogen.

mBio 2018 08 28;9(4). Epub 2018 Aug 28.

Antibiotic Resistance Action Center, Department of Environmental and Occupational Health, Milken Institute School of Public Health, George Washington University, Washington, DC, USA

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August 2018

Identifying Antibiotic-Resistant Infections.

Health Aff (Millwood) 2018 06;37(6):1014-1015

Minneapolis VA Healthcare System Minneapolis, Minnesota.

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June 2018

Draft Genomic Sequencing of Six Potential Extraintestinal Pathogenic Escherichia coli Isolates from Retail Chicken Meat.

Genome Announc 2018 May 24;6(21). Epub 2018 May 24.

U.S. Department of Agriculture, Agricultural Research Service, Eastern Regional Research Center, Wyndmoor, Pennsylvania, USA

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May 2018

Draft Genome Sequences of Five Neonatal Meningitis-Causing Escherichia coli Isolates (SP-4, SP-5, SP-13, SP-46, and SP-65).

Genome Announc 2018 Apr 19;6(16). Epub 2018 Apr 19.

U.S. Department of Agriculture, Agricultural Research Service, Eastern Regional Research Center, Wyndmoor, Pennsylvania, USA

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April 2018

Molecular Epidemiology of Extraintestinal Pathogenic .

EcoSal Plus 2018 04;8(1)

VA Western New York Healthcare System, Department of Medicine, Department of Microbiology and Immunology, Witebsky Center for Microbial Pathogenesis and Immunology, University of Buffalo, Buffalo, NY 14214.

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April 2018

Alpha-Toxin Contributes to Biofilm Formation among Staphylococcus aureus Wound Isolates.

Toxins (Basel) 2018 04 16;10(4). Epub 2018 Apr 16.

Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, MN 55455, USA.

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April 2018

Acute Pyelonephritis in Adults.

N Engl J Med 2018 03;378(12):1162

University of Buffalo, State University of New York, Buffalo, NY

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March 2018

Resident Physician Knowledge of Urine Testing and Treatment Over Four Years.

Infect Control Hosp Epidemiol 2018 05 28;39(5):616-618. Epub 2018 Feb 28.

1Minneapolis Veterans Affairs Health Care System,Minneapolis,Minnesota.

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May 2018

Confusion and Bacteriuria in Long-Term Care Facility Residents.

Authors:
James R Johnson

J Am Geriatr Soc 2018 07 23;66(6):1235. Epub 2018 Feb 23.

VA Medical Center, Minneapolis, MN, University of Minnesota, Minneapolis, MN.

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July 2018

Asymptomatic Bacteriuria.

Authors:
James R Johnson

Clin Infect Dis 2018 05;66(11):1816-1817

VA Medical Center, Minneapolis.

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May 2018

Acute Pyelonephritis in Adults.

N Engl J Med 2018 01;378(1):48-59

From Minneapolis Veterans Affairs (VA) Health Care System and the University of Minnesota, Minneapolis (J.R.J.); and the University of Buffalo, State University of New York, and VA Western New York Health Care System, Buffalo (T.A.R.).

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January 2018

Delirium in Hospitalized Older Adults.

Authors:
James R Johnson

N Engl J Med 2018 01;378(1):96

Veterans Affairs Medical Center, Minneapolis, MN

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January 2018

Phylogenetic Backgrounds and Virulence-Associated Traits of Escherichia coli Isolates from Surface Waters and Diverse Animals in Minnesota and Wisconsin.

Appl Environ Microbiol 2017 Dec 1;83(24). Epub 2017 Dec 1.

Department of Soil, Water and Climate, Department of Plant and Microbial Biology, and the BioTechnology Institute, University of Minnesota, St. Paul, Minnesota, USA.

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December 2017

Injectable In Situ Forming Depot Systems for Long-Acting Contraception.

Adv Biosyst 2017 Oct 25;1(10):e1700097. Epub 2017 Aug 25.

Department of Pharmaceutical Sciences, University of Tennessee Health Science Center, Memphis, TN, 38163, USA.

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October 2017

Ethanol Stimulates Locomotion via a G-Signaling Pathway in IL2 Neurons in .

Genetics 2017 11 26;207(3):1023-1039. Epub 2017 Sep 26.

The Physiological Laboratory, Institute of Translational Medicine, University of Liverpool, L69 3BX, UK

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November 2017

Treatment of ED patients with bacteriuria/pyuria of clinically undetermined significance.

Authors:
James R Johnson

Am J Emerg Med 2017 10 17;35(10):1561. Epub 2017 Jul 17.

VA Medical Center and Department of Medicine, University of Minnesota, Minneapolis, MN, United States. Electronic address:

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October 2017

Evaluation of Escherichia coli isolates from healthy chickens to determine their potential risk to poultry and human health.

PLoS One 2017 3;12(7):e0180599. Epub 2017 Jul 3.

Department of Food Science and Human Nutrition, Iowa State University, Ames, Iowa, United States of America.

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October 2017

Epidemic Emergence in the United States of Escherichia coli Sequence Type 131-30 (ST131-30), 2000 to 2009.

Antimicrob Agents Chemother 2017 08 25;61(8). Epub 2017 Jul 25.

JMI Laboratories, North Liberty, Iowa, USA.

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August 2017

Genomic Analysis of Factors Associated with Low Prevalence of Antibiotic Resistance in Extraintestinal Pathogenic Sequence Type 95 Strains.

mSphere 2017 Mar-Apr;2(2). Epub 2017 Apr 5.

Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, California, USA.

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April 2017

Acute Pancreatitis.

Authors:
James R Johnson

N Engl J Med 2017 02;376(6):598

Veterans Affairs Medical Center, Minneapolis, MN

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February 2017

Clonal distribution and associated characteristics of Escherichia coli clinical and surveillance isolates from a military medical center.

Diagn Microbiol Infect Dis 2017 Apr 20;87(4):382-385. Epub 2017 Jan 20.

Minneapolis Veterans Health Care System, Minneapolis, Minnesota, USA; Department of Medicine, University of Minnesota, Minneapolis, MN, USA. Electronic address:

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April 2017

Rapid and Specific Detection of the Escherichia coli Sequence Type 648 Complex within Phylogroup F.

J Clin Microbiol 2017 04 18;55(4):1116-1121. Epub 2017 Jan 18.

Australian National University, Canberra, Australia.

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April 2017

Definition of Complicated Urinary Tract Infection.

Authors:
James R Johnson

Clin Infect Dis 2017 02;64(4):529

VA Medical Center and University of Minnesota, Minneapolis, USA.

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February 2017

Bacteriuria/Pyuria of Clinically Undetermined Significance (BPCUS): Common, but Currently Nameless.

Am J Med 2017 05 21;130(5):e201-e204. Epub 2016 Dec 21.

Infectious Diseases Section, Minneapolis VA Health Care System, Minn; Infectious Diseases Division, Department of Medicine, University of Minnesota, Minneapolis.

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May 2017

Definitions of Complicated Urinary Tract Infection and Pyelonephritis.

Authors:
James R Johnson

Clin Infect Dis 2017 02 24;64(3):390. Epub 2016 Oct 24.

Veterans Affairs Medical Center and University of Minnesota, Minneapolis

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February 2017

Sequence Type 131 30 Is the Main Driver of Emerging Extended-Spectrum-β-Lactamase-Producing . at a Tertiary Care Center.

mSphere 2016 Nov-Dec;1(6). Epub 2016 Nov 23.

Los Angeles BioMedical Research Center at Harbor-Harbor-UCLA Medical Center, Torrance, California, USA; University of California, Los Angeles, California, USA.

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November 2016

The Niche for Sequence Type 131 Among Veterans: Urinary Tract Abnormalities and Long-Term Care Facilities.

Open Forum Infect Dis 2016 Sep 4;3(3):ofw138. Epub 2016 Jul 4.

Infectious Diseases Section; Research Service, Minneapolis Veterans Affairs Healthcare System, Minnesota.

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September 2016

Phylogenetic diversity, antimicrobial susceptibility and virulence characteristics of phylogroup F Escherichia coli in Australia.

Microbiology (Reading) 2016 11 22;162(11):1904-1912. Epub 2016 Sep 22.

Evolution, Ecology and Genetics, Research School of Biology, Australian National University, 116 Daley Road, Acton, Australian Capital Territory 2601, Australia.

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November 2016

An Accelerated Release Study to Evaluate Long-Acting Contraceptive Levonorgestrel-Containing in Situ Forming Depot Systems.

Pharmaceutics 2016 Sep 1;8(3). Epub 2016 Sep 1.

Department of Pharmaceutical Sciences, University of Tennessee Health Sciences Center, Memphis, TN 38163, USA.

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September 2016

Separate F-Type Plasmids Have Shaped the Evolution of the H30 Subclone of Escherichia coli Sequence Type 131.

mSphere 2016 Jul-Aug;1(4). Epub 2016 Jun 29.

Minneapolis Veterans Health Care System, Minneapolis, Minnesota, USA; Department of Medicine, University of Minnesota, Minneapolis, Minnesota, USA.

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July 2016

GeneMill: A 21st century platform for innovation.

Biochem Soc Trans 2016 06;44(3):681-3

GeneMill, Institute of Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, U.K.

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June 2016

Isolation and Characterization of Escherichia coli Sequence Type 131 and Other Antimicrobial-Resistant Gram-Negative Bacilli from Clinical Stool Samples from Veterans.

Antimicrob Agents Chemother 2016 08 22;60(8):4638-45. Epub 2016 Jul 22.

University of Minnesota, Minneapolis, Minnesota, USA Veterans Affairs Medical Center, Minneapolis, Minnesota, USA.

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August 2016

Complete Genome Sequence of a CTX-M-15-Producing Escherichia coli Strain from the H30Rx Subclone of Sequence Type 131 from a Patient with Recurrent Urinary Tract Infections, Closely Related to a Lethal Urosepsis Isolate from the Patient's Sister.

Genome Announc 2016 May 12;4(3). Epub 2016 May 12.

Department of Environmental and Occupational Health, George Washington University, Washington, District of Columbia, USA Division of Pathogen Genomics, Translational Genomics Research Institute (TGen), Flagstaff, Arizona, USA.

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May 2016

Environmental Contamination in Households of Patients with Recurrent Clostridium difficile Infection.

Appl Environ Microbiol 2016 May 18;82(9):2686-2692. Epub 2016 Apr 18.

Department of Medicine, Division of Infectious Diseases, University of Minnesota, Minneapolis, Minnesota, USA

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May 2016