60 Publications
medRxiv 2021 Jan 25. Epub 2021 Jan 25.
Emerg Infect Dis 2021 03 5;27(3):687-693. Epub 2021 Jan 5.
Mol Biol Evol 2020 Nov 3. Epub 2020 Nov 3.
Laboratory of Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, KU Leuven, Leuven, Belgium.
Nat Commun 2020 12 11;11(1):6351. Epub 2020 Dec 11.
Institute of Environmental Science and Research, Wellington, New Zealand.
Virus Evol 2019 Jul 4;5(2):vez046. Epub 2019 Dec 4.
Virology Surveillance and Diagnosis Branch, Influenza Division, National Center for Immunization and Respiratory Diseases (NCIRD), Centers for Disease Control and Prevention (CDC), 1600 Clifton Road, Atlanta, GA 30333, USA.
PLoS Pathog 2020 11 19;16(11):e1008984. Epub 2020 Nov 19.
ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland.
BMJ Open 2020 10 7;10(10):e037295. Epub 2020 Oct 7.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Science 2020 10 10;370(6516):571-575. Epub 2020 Sep 10.
Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Injury 2020 07;51(7):1411-1412
James Cook University Hospital, South Tees, U.K.. Electronic address:
medRxiv 2020 Apr 6. Epub 2020 Apr 6.
Fred Hutchinson Cancer Research Center, Seattle, WA USA.
BMC Cancer 2020 May 25;20(1):469. Epub 2020 May 25.
Nuffield Department of Surgical Sciences, University of Oxford, Oxford, OX3 9DU, UK.
Proc Natl Acad Sci U S A 2020 06 7;117(23):12522-12523. Epub 2020 May 7.
Emerging Pathogens Institute, University of Florida, Gainesville, FL 32609;
Microb Genom 2020 05 29;6(5). Epub 2020 Apr 29.
Parasites and microbes, Wellcome Sanger InstituteHinxton, UK.
Virus Evol 2020 Jan 10;6(1):veaa027. Epub 2020 Apr 10.
Centre for Infectious Diseases and Microbiology Laboratory Services, NSW Health Pathology - Institute of Clinical Pathology and Medical Research, Westmead, NSW 2145, Australia.
Microorganisms 2020 Mar 6;8(3). Epub 2020 Mar 6.
Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton General Hospital, Southampton SO166YD, UK.
PLoS Pathog 2019 10 31;15(10):e1008042. Epub 2019 Oct 31.
Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America.
Nat Rev Genet 2019 11 24;20(11):631-656. Epub 2019 Jul 24.
Precision Medicine, Oncology R&D, AstraZeneca, Cambridge, UK.
Microb Genom 2019 02 5;5(2). Epub 2019 Feb 5.
2Hospital for Tropical Diseases, Wellcome Trust Major Overseas Programme, Oxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Bioinformatics 2018 12;34(23):4121-4123
Max Planck Institute for Developmental Biology, Tübingen, Germany.
Lancet Gastroenterol Hepatol 2018 07 27;3(7):489-498. Epub 2018 Apr 27.
Academic Laboratory of Medical Genetics, University of Cambridge, Cambridge, UK; National Institute for Health Research Cambridge Biomedical Research Centre, Cambridge, UK. Electronic address:
Nat Methods 2018 01;15(1):7-8
Illumina Inc., San Diego, California, USA. Precision Medicine and Genomics, IMED Biotech Unit, AstraZeneca, Cambridge, UK.
BMC Genomics 2017 12 28;18(1):993. Epub 2017 Dec 28.
Pathogen Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK.
Nat Commun 2017 12 11;8(1):2128. Epub 2017 Dec 11.
Department of Pharmacology, University of Cambridge, Cambridge, CB2 1PD, UK.
Curr Top Microbiol Immunol 2018;412:107-131
Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, CB10 1SA, UK.
Bioinformatics 2018 Jan;34(2):292-293
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, UK.
Genome Res 2017 07 6;27(7):1220-1229. Epub 2017 Jun 6.
Pathogen Genomics, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, United Kingdom.
J Clin Immunol 2017 07 17;37(5):415-418. Epub 2017 Apr 17.
Department of Medicine, University of Cambridge School of Clinical Medicine, Addenbrooke's Hospital, Cambridge, CB2 0QQ, UK.
Nat Genet 2017 03;49(4):651
Virus Res 2017 03 9;232:69-76. Epub 2017 Feb 9.
South African National Bioinformatics Institute, University of the Western Cape, Bellville 7535, South Africa. Electronic address:
Cell 2016 09 15;167(1):260-274.e22. Epub 2016 Sep 15.
Department of Oncology and Cancer Research UK Cambridge Institute, Li Ka Shing Centre, University of Cambridge, Cambridge CB2 0RE, UK; Cambridge Breast Unit, NIHR Cambridge Biomedical Research Centre and Cambridge Experimental Cancer Medicine Centre at Cambridge University Hospitals NHS Foundation Trust, Cambridge CB2 2QQ, UK. Electronic address: