James Farnham

James Farnham

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James Farnham

James Farnham

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Increased risk for other cancers in individuals with Ewing sarcoma and their relatives.

Cancer Med 2019 Oct 31. Epub 2019 Oct 31.

Genetic Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT, USA.

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http://dx.doi.org/10.1002/cam4.2575DOI Listing
October 2019

Relative risk for Alzheimer disease based on complete family history.

Neurology 2019 Apr 13;92(15):e1745-e1753. Epub 2019 Mar 13.

From the Genetic Epidemiology Program, Department of Internal Medicine (L.A.C.-A., J.M.F., C.C.T., H.K.), Center for Alzheimer's Care, Imaging and Research, Department of Neurology (N.L.F.), and Department of Family and Preventive Medicine (K.S.), University of Utah School of Medicine; Huntsman Cancer Institute (L.A.C.-A., H.K.); George E. Wahlen Department of Veterans Affairs Medical Center (L.A.C.-A.), Salt Lake City; Department of Psychology (J.T., C.C.), Utah State University, Logan; and Departments of Biology and Neuroscience (J.S.K.K.), Brigham Young University, Provo, UT.

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http://www.neurology.org/lookup/doi/10.1212/WNL.000000000000
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http://dx.doi.org/10.1212/WNL.0000000000007231DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6511086PMC
April 2019

Germline Variant in and Response to Abiraterone Acetate Plus Prednisone (AA) in New-onset Metastatic Castration-resistant Prostate Cancer (mCRPC).

Mol Cancer Ther 2019 03 26;18(3):726-729. Epub 2018 Dec 26.

Division of Oncology, Department of Internal Medicine, Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah.

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http://dx.doi.org/10.1158/1535-7163.MCT-18-0739DOI Listing
March 2019

Similar survival of patients with multiple versus single primary melanomas based on Utah Surveillance, Epidemiology, and End Results data (1973-2011).

J Am Acad Dermatol 2018 Aug 1;79(2):238-244. Epub 2018 Mar 1.

Department of Medicine, University of Utah Health Sciences Center, Salt Lake City, Utah; Huntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah; George E. Wahlen Department of Veterans Affairs Medical Center, Salt Lake City, Utah.

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http://dx.doi.org/10.1016/j.jaad.2018.02.055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6754624PMC
August 2018

Population genealogy resource shows evidence of familial clustering for Alzheimer disease.

Neurol Genet 2018 Aug 1;4(4):e249. Epub 2018 Aug 1.

Genetic Epidemiology Program (L.A.C.-A., A.T., S.B., J.M.F., C.C.T.), Department of Internal Medicine, University of Utah School of Medicine; George E. Wahlen Department of Veterans Affairs Medical Center (L.A.C.-A., L.J.M.); Pleiades Software Development (S.D., T.M.), Inc, Salt Lake City; Lineages (J.C.), Draper; SJ Quinney College of Law (J.C.), University of Utah; Department of Biology (J.S.K.K.), Brigham Young University, Provo; Department of Dermatology (L.J.M.), University of Utah School of Medicine, Salt Lake City; and Department of Veterans Affairs (L.J.M.), Washington DC.

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http://dx.doi.org/10.1212/NXG.0000000000000249DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6089693PMC
August 2018

Independent Validation of Effect of HSD3B1 Genotype on Response to Androgen-Deprivation Therapy in Prostate Cancer.

JAMA Oncol 2017 06;3(6):856-857

University of Utah Huntsman Cancer Institute, Salt Lake City2Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City.

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http://dx.doi.org/10.1001/jamaoncol.2017.0147DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5824318PMC
June 2017

Erratum to "Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms" [J Shoulder Elbow Surg 2016;25:174-179].

J Shoulder Elbow Surg 2016 Oct 1;25(10):1731. Epub 2016 Aug 1.

Division of Genetic Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, UT, USA.

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http://dx.doi.org/10.1016/j.jse.2016.07.001DOI Listing
October 2016

Population-based risks for cancer in patients with ALS.

Neurology 2016 Jul 11;87(3):289-94. Epub 2016 May 11.

From the Department of Neurology (S.B.G., K.P.F., M.B.B., S.M.P.) and Division of Genetic Epidemiology, Department of Internal Medicine (D.A., J.M.F., K.K.T., L.C.-A.), University of Utah, School of Medicine, Salt Lake City; College of Behavioral and Social Science (H.M.), University of Utah, Salt Lake City; and George E. Wahlen Department of Veterans Affairs Medical Center (L.C.-A.), Salt Lake City, UT.

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http://www.neurology.org/content/early/2016/05/11/WNL.000000
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http://www.neurology.org/lookup/doi/10.1212/WNL.000000000000
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http://dx.doi.org/10.1212/WNL.0000000000002757DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4955272PMC
July 2016

Evidence for an Environmental and Inherited Predisposition Contributing to the Risk for Global Tendinopathies or Compression Neuropathies in Patients With Rotator Cuff Tears.

Orthop J Sports Med 2016 Apr 12;4(4):2325967116642173. Epub 2016 Apr 12.

Division of Genetic Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, Utah, USA.; George E. Wahlen Department of Veterans Affairs Medical Center, Salt Lake City, Utah, USA.

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http://dx.doi.org/10.1177/2325967116642173DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4831028PMC
April 2016

Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms.

J Shoulder Elbow Surg 2016 Feb 5;25(2):174-9. Epub 2015 Sep 5.

Division of Genetic Epidemiology, Department of Internal Medicine, University of Utah, Salt Lake City, UT, USA.

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http://dx.doi.org/10.1016/j.jse.2015.07.005DOI Listing
February 2016

Evidence for pelvic organ prolapse predisposition genes on chromosomes 10 and 17.

Am J Obstet Gynecol 2015 Jun 31;212(6):771.e1-7. Epub 2014 Dec 31.

Department of Obstetrics and Gynecology, University of Utah School of Medicine, Salt Lake City, UT.

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http://dx.doi.org/10.1016/j.ajog.2014.12.037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4457667PMC
June 2015

Strategies for selection of subjects for sequencing after detection of a linkage peak.

BMC Proc 2011 29;5 Suppl 9:S77. Epub 2011 Nov 29.

Division of Genetic Epidemiology, Department of Internal Medicine, University of Utah, 391 Chipeta Way, Suite D, Salt Lake City, UT 84105, USA ; George E. Wallen Department of Veterans Affairs Medical Center, 500 Foothill Drive, Salt Lake City, UT 84148, USA.

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http://dx.doi.org/10.1186/1753-6561-5-S9-S77DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3287917PMC
April 2015

Prostate cancer risk prediction based on complete prostate cancer family history.

Prostate 2015 Mar 18;75(4):390-8. Epub 2014 Nov 18.

Department of Pharmacotherapy, Pharmacotherapy Outcomes Research Center, College of Pharmacy, University of Utah, Salt Lake City, Utah.

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http://dx.doi.org/10.1002/pros.22925DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4293302PMC
March 2015

Identification of specific Y chromosomes associated with increased prostate cancer risk.

Prostate 2014 Jun 6;74(9):991-8. Epub 2014 May 6.

Division of Genetic Epidemiology, Department of Medicine, University of Utah School of Medicine, Salt Lake City, Utah; George E. Wahlen Department of Veterans Affairs Medical Center, Salt Lake City, Utah; Huntsman Cancer Institute, Salt Lake City, Utah.

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http://dx.doi.org/10.1002/pros.22821DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4109644PMC
June 2014

Pairwise shared genomic segment analysis in three Utah high-risk breast cancer pedigrees.

BMC Genomics 2012 Nov 28;13:676. Epub 2012 Nov 28.

Department of Biomedical Informatics, University of Utah Medical School,Health Sciences Education Building, Salt Lake City, UT 84112, USA.

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http://dx.doi.org/10.1186/1471-2164-13-676DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3561143PMC
November 2012

"Hard-soft" synthesis of SrCrO3-δ superstructure phases.

Angew Chem Int Ed Engl 2012 Oct 26;51(43):10791-4. Epub 2012 Sep 26.

Centre for Science at Extreme Conditions and School of Chemistry, University of Edinburgh, Mayfield Road, Edinburgh EH9 3JZ, UK.

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http://doi.wiley.com/10.1002/anie.201206203
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http://dx.doi.org/10.1002/anie.201206203DOI Listing
October 2012

A unique genome-wide association analysis in extended Utah high-risk pedigrees identifies a novel melanoma risk variant on chromosome arm 10q.

Hum Genet 2012 Jan 26;131(1):77-85. Epub 2011 Jun 26.

Division of Genetic Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City, UT 84132, USA.

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http://dx.doi.org/10.1007/s00439-011-1048-zDOI Listing
January 2012

Seven prostate cancer susceptibility loci identified by a multi-stage genome-wide association study.

Authors:
Zsofia Kote-Jarai Ali Amin Al Olama Graham G Giles Gianluca Severi Johanna Schleutker Maren Weischer Daniele Campa Elio Riboli Tim Key Henrik Gronberg David J Hunter Peter Kraft Michael J Thun Sue Ingles Stephen Chanock Demetrius Albanes Richard B Hayes David E Neal Freddie C Hamdy Jenny L Donovan Paul Pharoah Fredrick Schumacher Brian E Henderson Janet L Stanford Elaine A Ostrander Karina Dalsgaard Sorensen Thilo Dörk Gerald Andriole Joanne L Dickinson Cezary Cybulski Jan Lubinski Amanda Spurdle Judith A Clements Suzanne Chambers Joanne Aitken R A Frank Gardiner Stephen N Thibodeau Dan Schaid Esther M John Christiane Maier Walther Vogel Kathleen A Cooney Jong Y Park Lisa Cannon-Albright Hermann Brenner Tomonori Habuchi Hong-Wei Zhang Yong-Jie Lu Radka Kaneva Ken Muir Sara Benlloch Daniel A Leongamornlert Edward J Saunders Malgorzata Tymrakiewicz Nadiya Mahmud Michelle Guy Lynne T O'Brien Rosemary A Wilkinson Amanda L Hall Emma J Sawyer Tokhir Dadaev Jonathan Morrison David P Dearnaley Alan Horwich Robert A Huddart Vincent S Khoo Christopher C Parker Nicholas Van As Christopher J Woodhouse Alan Thompson Tim Christmas Chris Ogden Colin S Cooper Aritaya Lophatonanon Melissa C Southey John L Hopper Dallas R English Tiina Wahlfors Teuvo L J Tammela Peter Klarskov Børge G Nordestgaard M Andreas Røder Anne Tybjærg-Hansen Stig E Bojesen Ruth Travis Federico Canzian Rudolf Kaaks Fredrik Wiklund Markus Aly Sara Lindstrom W Ryan Diver Susan Gapstur Mariana C Stern Roman Corral Jarmo Virtamo Angela Cox Christopher A Haiman Loic Le Marchand Liesel Fitzgerald Suzanne Kolb Erika M Kwon Danielle M Karyadi Torben Falck Orntoft Michael Borre Andreas Meyer Jürgen Serth Meredith Yeager Sonja I Berndt James R Marthick Briony Patterson Dominika Wokolorczyk Jyotsna Batra Felicity Lose Shannon K McDonnell Amit D Joshi Ahva Shahabi Antje E Rinckleb Ana Ray Thomas A Sellers Hui-Yi Lin Robert A Stephenson James Farnham Heiko Muller Dietrich Rothenbacher Norihiko Tsuchiya Shintaro Narita Guang-Wen Cao Chavdar Slavov Vanio Mitev Douglas F Easton Rosalind A Eeles

Nat Genet 2011 Jul 10;43(8):785-91. Epub 2011 Jul 10.

The Institute of Cancer Research, Sutton, Surrey, UK.

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http://dx.doi.org/10.1038/ng.882DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3396006PMC
July 2011

Significant linkage evidence for a predisposition gene for pelvic floor disorders on chromosome 9q21.

Am J Hum Genet 2009 May 23;84(5):678-82. Epub 2009 Apr 23.

Department of Biomedical Informatics, University of Utah School of Medicine, Salt Lake City, UT 84105, USA.

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http://dx.doi.org/10.1016/j.ajhg.2009.04.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2681003PMC
May 2009

No evidence of BRCA2 mutations in chromosome 13q-linked Utah high-risk prostate cancer pedigrees.

BMC Res Notes 2009 May 28;2:94. Epub 2009 May 28.

Genetic Epidemiology Group, Department of Biomedical Informatics, University of Utah School of Medicine, 391 Chipeta Way, Suite D, Salt Lake City, UT 84108, USA.

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http://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0
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http://dx.doi.org/10.1186/1756-0500-2-94DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2694822PMC
May 2009

Replication of the 10q11 and Xp11 prostate cancer risk variants: results from a Utah pedigree-based study.

Cancer Epidemiol Biomarkers Prev 2009 Apr 31;18(4):1290-4. Epub 2009 Mar 31.

Department of Biomedical Informatics, University of Utah School of Medicine, Salt Lake City, UT 84108, USA.

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http://dx.doi.org/10.1158/1055-9965.EPI-08-0327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2697376PMC
April 2009

Statistical recombinant mapping in extended high-risk Utah pedigrees narrows the 8q24 prostate cancer locus to 2.0 Mb.

Prostate 2007 Sep;67(13):1456-64

Division of Genetic Epidemiology, Department of Biomedical Informatics, University of Utah School of Medicine, Salt Lake City, Utah 84108, USA.

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http://doi.wiley.com/10.1002/pros.20631
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http://dx.doi.org/10.1002/pros.20631DOI Listing
September 2007

Pooled genome linkage scan of aggressive prostate cancer: results from the International Consortium for Prostate Cancer Genetics.

Hum Genet 2006 Nov 25;120(4):471-85. Epub 2006 Aug 25.

Harwick 7, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1007/s00439-006-0219-9DOI Listing
November 2006

Localization of a prostate cancer predisposition gene to an 880-kb region on chromosome 22q12.3 in Utah high-risk pedigrees.

Cancer Res 2006 Oct;66(20):10205-12

Division of Genetic Epidemiology, Department of Biomedical Informatics, University of Utah School of Medicine, Salt Lake City, Utah 84108, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-06-1233DOI Listing
October 2006

Genomic search for prostate cancer predisposition loci in Utah pedigrees.

Prostate 2005 Dec;65(4):365-74

Genetic Epidemiology, Department of Medical Informatics, University of Utah, Salt Lake City, Utah 84108, USA.

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http://dx.doi.org/10.1002/pros.20287DOI Listing
December 2005

Population-based risk assessment for other cancers in relatives of hereditary prostate cancer (HPC) cases.

Prostate 2005 Sep;64(4):347-55

Department of Medical Informatics, University of Utah School of Medicine, Salt Lake City, Utah, USA.

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http://doi.wiley.com/10.1002/pros.20248
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http://dx.doi.org/10.1002/pros.20248DOI Listing
September 2005

A combined genomewide linkage scan of 1,233 families for prostate cancer-susceptibility genes conducted by the international consortium for prostate cancer genetics.

Am J Hum Genet 2005 Aug 29;77(2):219-29. Epub 2005 Jun 29.

Center for Human Genomics, Wake Forest University School of Medicine, Winston-Salem, NC, USA.

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http://dx.doi.org/10.1086/432377DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1224525PMC
August 2005

Characterization of linkage disequilibrium structure, mutation history, and tagging SNPs, and their use in association analyses: ELAC2 and familial early-onset prostate cancer.

Genet Epidemiol 2005 Apr;28(3):232-43

Genetic Epidemiology Division, Department of Medical Informatics, University of Utah School of Medicine, Salt Lake City, Utah, USA.

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http://dx.doi.org/10.1002/gepi.20054DOI Listing
April 2005

Confirmation of the HPCX prostate cancer predisposition locus in large Utah prostate cancer pedigrees.

Hum Genet 2005 Feb 8;116(3):179-85. Epub 2004 Dec 8.

Genetic Epidemiology, Department of Medical Informatics, University of Utah, Salt Lake City, UT 84108, USA.

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http://dx.doi.org/10.1007/s00439-004-1220-9DOI Listing
February 2005

Confirmation of chromosome 7q11 locus for predisposition to intracranial aneurysm.

Hum Genet 2004 Feb 6;114(3):250-5. Epub 2003 Nov 6.

Department of Medical Informatics, University of Utah School of Medicine, 391 Chipeta Way, Salt Lake City, UT 84108, USA.

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http://link.springer.com/10.1007/s00439-003-1044-z
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http://dx.doi.org/10.1007/s00439-003-1044-zDOI Listing
February 2004

A cautionary note on the appropriateness of using a linkage resource for an association study.

BMC Genet 2003 Dec 31;4 Suppl 1:S89. Epub 2003 Dec 31.

Genetic Epidemiology, Department of Medical Informatics, University of Utah School of Medicine, Salt Lake City, Utah, USA.

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http://dx.doi.org/10.1186/1471-2156-4-S1-S89DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1866529PMC
December 2003

A genealogical assessment of heritable predisposition to aneurysms.

J Neurosurg 2003 Oct;99(4):637-43

Department of Medical Informatics, University of Utah School of Medicine, Salt Lake City, Utah, USA.

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https://thejns.org/view/journals/j-neurosurg/99/4/article-p6
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http://dx.doi.org/10.3171/jns.2003.99.4.0637DOI Listing
October 2003

Genome-wide linkage analysis for celiac disease in North American families.

Am J Med Genet 2002 Jul;111(1):1-9

Department of Medical Informatics, University of Utah School of Medicine, Salt Lake City 84108, USA.

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http://dx.doi.org/10.1002/ajmg.10527DOI Listing
July 2002