Jae K Lee

Jae K Lee

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Treatment of Uveitis and Outcomes of Glaucoma Drainage Implant Surgery: A Meta-Analysis.

Ocul Immunol Inflamm 2019 Aug 16:1-6. Epub 2019 Aug 16.

a Department of Ophthalmology, University of Virginia , Charlottesville , VA , USA.

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http://dx.doi.org/10.1080/09273948.2019.1629602DOI Listing
August 2019

Time series modeling of cell cycle exit identifies Brd4 dependent regulation of cerebellar neurogenesis.

Nat Commun 2019 Jul 10;10(1):3028. Epub 2019 Jul 10.

Department of Psychiatry and Behavioral Sciences, Center for Therapeutic Innovation, Sylvester Comprehensive Cancer Center, Miami Project to Cure Paralysis, University of Miami Miller School of Medicine, Miami, FL, 33136, USA.

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http://dx.doi.org/10.1038/s41467-019-10799-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6620341PMC
July 2019

The origin, fate, and contribution of macrophages to spinal cord injury pathology.

Acta Neuropathol 2019 May 30;137(5):785-797. Epub 2019 Mar 30.

Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami School of Medicine, Miami, FL, 33136, USA.

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http://dx.doi.org/10.1007/s00401-019-01992-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6510275PMC
May 2019

Correction to: The origin, fate, and contribution of macrophages to spinal cord injury pathology.

Acta Neuropathol 2019 May;137(5):799-800

Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami School of Medicine, Miami, FL, 33136, USA.

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http://dx.doi.org/10.1007/s00401-019-02016-wDOI Listing
May 2019

Personalizing Gastric Cancer Screening With Predictive Modeling of Disease Progression Biomarkers.

Appl Immunohistochem Mol Morphol 2019 Apr;27(4):270-277

Departments of Integrated Mathematical Oncology.

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http://dx.doi.org/10.1097/PAI.0000000000000598DOI Listing
April 2019

Congruence of multiple patient-related outcomes within a single day.

Support Care Cancer 2019 Mar 1;27(3):867-872. Epub 2018 Aug 1.

Health Outcomes & Behavior Department, H. Lee Moffitt Cancer Center & Research Institute, 12902 Magnolia Drive, Tampa, FL, 33612, USA.

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http://dx.doi.org/10.1007/s00520-018-4372-1DOI Listing
March 2019

Biologically anchored knowledge expansion approach uncovers KLF4 as a novel insulin signaling regulator.

PLoS One 2018 21;13(9):e0204100. Epub 2018 Sep 21.

Department of Systems and Information Engineering, University of Virginia, Charlottesville, Virginia, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0204100PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6150497PMC
March 2019

Bromodomain and extraterminal domain-containing protein inhibition attenuates acute inflammation after spinal cord injury.

Exp Neurol 2018 11 19;309:181-192. Epub 2018 Aug 19.

The Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami Miller School of Medicine, Miami, FL, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00144886183035
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http://dx.doi.org/10.1016/j.expneurol.2018.08.005DOI Listing
November 2018

Injury type-dependent differentiation of NG2 glia into heterogeneous astrocytes.

Exp Neurol 2018 10 3;308:72-79. Epub 2018 Jul 3.

Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami School of Medicine, Miami, FL 33136, United States. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00144886183020
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http://dx.doi.org/10.1016/j.expneurol.2018.07.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6704012PMC
October 2018

Single drug biomarker prediction for ER- breast cancer outcome from chemotherapy.

Endocr Relat Cancer 2018 06 29;25(6):595-605. Epub 2018 Mar 29.

Department of Biostatistics and BioinformaticsH. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida, USA

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http://dx.doi.org/10.1530/ERC-17-0495DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5920016PMC
June 2018

Macrophage depletion and Schwann cell transplantation reduce cyst size after rat contusive spinal cord injury.

Neural Regen Res 2018 Apr;13(4):684-691

The Miami Project to Cure Paralysis; Department of Neurological Surgery, University of Miami Miller School of Medicine; Department of Cell Biology, University of Miami Miller School of Medicine, Miami, FL, USA.

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http://dx.doi.org/10.4103/1673-5374.230295DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5950679PMC
April 2018

Toward early detection of Helicobacter pylori-associated gastric cancer.

Gastric Cancer 2018 Mar 19;21(2):196-203. Epub 2017 Jul 19.

Department of Anatomic Pathology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, 33612, USA.

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http://dx.doi.org/10.1007/s10120-017-0748-zDOI Listing
March 2018

CONCORD biomarker prediction for novel drug introduction to different cancer types.

Oncotarget 2018 Jan 9;9(1):1091-1106. Epub 2017 Dec 9.

Department of Biostatistics and Bioinformatics, Moffitt Cancer Center, Tampa, FL, USA.

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http://www.oncotarget.com/fulltext/23124
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http://dx.doi.org/10.18632/oncotarget.23124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5787421PMC
January 2018

The Impact of Music Therapy on Anxiety in Cancer Patients Undergoing Simulation for Radiation Therapy.

Int J Radiat Oncol Biol Phys 2017 09 8;99(1):103-110. Epub 2017 May 8.

Department of Radiation Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida.

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http://dx.doi.org/10.1016/j.ijrobp.2017.05.003DOI Listing
September 2017

An injectable hydrogel enhances tissue repair after spinal cord injury by promoting extracellular matrix remodeling.

Nat Commun 2017 09 14;8(1):533. Epub 2017 Sep 14.

Department of Brain Science, Ajou University School of Medicine, 164 Worldcup-ro, Yeongtong-gu, Suwon, 16499, Republic of Korea.

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http://www.nature.com/articles/s41467-017-00583-8
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http://dx.doi.org/10.1038/s41467-017-00583-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5599609PMC
September 2017

Phase I study of oral ridaforolimus in combination with paclitaxel and carboplatin in patients with solid tumor cancers.

BMC Cancer 2017 Jun 8;17(1):407. Epub 2017 Jun 8.

Department of Gynecologic Oncology, H. Lee Moffitt Cancer Center and Research Institute, 12902 Magnolia Drive, Tampa, FL, 33647, USA.

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http://dx.doi.org/10.1186/s12885-017-3394-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5465458PMC
June 2017

Neoadjuvant radiotherapy of early-stage breast cancer and long-term disease-free survival.

Breast Cancer Res 2017 Jun 30;19(1):75. Epub 2017 Jun 30.

Department of Integrated Mathematical Oncology, H. Lee Moffitt Cancer Center & Research Institute, 12902 Magnolia Drive, SRB 4, Tampa, FL, 33612, USA.

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http://dx.doi.org/10.1186/s13058-017-0870-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5493088PMC
June 2017

Discordance of Somatic Mutations Between Asian and Caucasian Patient Populations with Gastric Cancer.

Mol Diagn Ther 2017 04;21(2):179-185

Institute for Clinical Pharmacology, Xiangya Hospital, Central South University, Changsha, China.

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http://dx.doi.org/10.1007/s40291-016-0250-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5357153PMC
April 2017

Module Anchored Network Inference: A Sequential Module-Based Approach to Novel Gene Network Construction from Genomic Expression Data on Human Disease Mechanism.

Int J Genomics 2017 18;2017:8514071. Epub 2017 Jan 18.

Department of Systems and Information Engineering, University of Virginia, Charlottesville, VA 22904, USA; Department of Biostatistics and Bioinformatics, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL 33612, USA; Department of Public Health Sciences, University of Virginia School of Medicine, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1155/2017/8514071DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5286469PMC
January 2017

A comparative transcriptomic analysis of astrocytes differentiation from human neural progenitor cells.

Eur J Neurosci 2016 11 25;44(10):2858-2870. Epub 2016 Sep 25.

Department of Psychiatry and Behavioral Sciences, Center for Therapeutic Innovation, University of Miami Miller School of Medicine, 1501 NW 10th Ave, BRB 508, Miami, FL, 33136, USA.

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http://dx.doi.org/10.1111/ejn.13382DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5118072PMC
November 2016

Understanding the NG2 Glial Scar after Spinal Cord Injury.

Front Neurol 2016 15;7:199. Epub 2016 Nov 15.

Miami Project to Cure Paralysis, The Neuroscience Graduate Program, Department of Neurological Surgery, University of Miami Miller School of Medicine , Miami, FL , USA.

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http://dx.doi.org/10.3389/fneur.2016.00199DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5108923PMC
November 2016

Point success rate for patient therapeutic response prediction by continuous biomarker scores.

Stat Methods Med Res 2016 08 9;25(4):1638-47. Epub 2013 Jul 9.

Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA

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http://dx.doi.org/10.1177/0962280213493161DOI Listing
August 2016

STAT3 and SOCS3 regulate NG2 cell proliferation and differentiation after contusive spinal cord injury.

Neurobiol Dis 2016 May 22;89:10-22. Epub 2016 Jan 22.

Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami School of Medicine, Miami, FL 33136, USA. Electronic address:

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http://dx.doi.org/10.1016/j.nbd.2016.01.017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4785033PMC
May 2016

Enhanced Transcriptional Activity and Mitochondrial Localization of STAT3 Co-induce Axon Regrowth in the Adult Central Nervous System.

Cell Rep 2016 Apr 31;15(2):398-410. Epub 2016 Mar 31.

Department of Neurological Surgery, Miami Project to Cure Paralysis, University of Miami Miller School of Medicine, Miami, FL 33136, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.03.029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4833545PMC
April 2016

Tumor necrosis factor superfamily member APRIL contributes to fibrotic scar formation after spinal cord injury.

J Neuroinflammation 2016 Apr 20;13(1):87. Epub 2016 Apr 20.

Department of Neurological Surgery, Miami Project to Cure Paralysis, University of Miami School of Medicine, Miami, FL, 33136, USA.

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http://dx.doi.org/10.1186/s12974-016-0552-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4839088PMC
April 2016

The Role of Prolactin in Bone Metastasis and Breast Cancer Cell-Mediated Osteoclast Differentiation.

J Natl Cancer Inst 2016 Mar 19;108(3). Epub 2015 Nov 19.

Affiliations of authors: University of Calgary, Department of Biological Sciences and Arnie Charbonneau Cancer Institute , Calgary , Canada (AS, AF, YC, LG, CSS); H. Lee Moffitt Cancer Center & Research Institute, Department of Biostatistics and Bioinformatics , Tampa, FL (THJ, JKL); Tom Baker Cancer Centre, Translational Labs , Calgary , Canada (AK, SKP, JH, AC, CE, PAT, DM, AM); Université Paris Descartes, Inserm U1151, Institut Necker Enfants Malades (INEM), Team "Pathophysiology of PRL/GH" , Paris , France (FB, VG); Medical Department of Breast Oncology, The Tumor Hospital of Harbin Medical University , Harbin , China (YC, LC); H. Lee Moffitt Cancer Center & Research Institute, Department of Anatomical Pathology , Tampa, FL (AM).

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http://dx.doi.org/10.1093/jnci/djv338DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5943829PMC
March 2016

Casein kinase signaling in axon regeneration.

Neural Regen Res 2016 Feb;11(2):210-1

The Miami Project to Cure Paralysis, Department of Neurosurgery, University of Miami, Miami, FL, USA.

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http://dx.doi.org/10.4103/1673-5374.177713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4810969PMC
February 2016

Fibronectin Matrix Assembly after Spinal Cord Injury.

J Neurotrauma 2015 Aug 9;32(15):1158-67. Epub 2015 Mar 9.

Department of Neurological Surgery, Miami Project to Cure Paralysis, University of Miami School of Medicine , Miami, Florida.

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http://dx.doi.org/10.1089/neu.2014.3703DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4507358PMC
August 2015

Rational Polypharmacology: Systematically Identifying and Engaging Multiple Drug Targets To Promote Axon Growth.

ACS Chem Biol 2015 Aug 24;10(8):1939-51. Epub 2015 Jun 24.

○Department of Chemical Biology, GlaxoSmithKline, Research Triangle Park, North Carolina 27709, United States.

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http://dx.doi.org/10.1021/acschembio.5b00289DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4899818PMC
August 2015

A proliferation saturation index to predict radiation response and personalize radiotherapy fractionation.

Radiat Oncol 2015 Jul 31;10:159. Epub 2015 Jul 31.

Departments of Integrated Mathematical Oncology, H. Lee Moffitt Cancer Center & Research Institute, 12902 Magnolia Drive, Tampa, FL, 33612, USA.

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http://www.ro-journal.com/content/10/1/159
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http://dx.doi.org/10.1186/s13014-015-0465-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4521490PMC
July 2015

A surviving intact branch stabilizes remaining axon architecture after injury as revealed by in vivo imaging in the mouse spinal cord.

Neuron 2015 May 30;86(4):947-954. Epub 2015 Apr 30.

Department of Neurosciences, University of California San Diego, School of Medicine, La Jolla, CA 92093-0691, USA; Biomedical Sciences Graduate Program, University of California San Diego, School of Medicine, La Jolla, CA 92093-0691, USA. Electronic address:

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http://dx.doi.org/10.1016/j.neuron.2015.03.061DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4441580PMC
May 2015

Mammalian target of rapamycin's distinct roles and effectiveness in promoting compensatory axonal sprouting in the injured CNS.

J Neurosci 2014 Nov;34(46):15347-55

Miami Project to Cure Paralysis and Department of Neurosurgery, University of Miami Miller School of Medicine, Miami, Florida 33136

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http://dx.doi.org/10.1523/JNEUROSCI.1935-14.2014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4228137PMC
November 2014

A cleavage-potentiated fragment of tear lacritin is bactericidal.

J Biol Chem 2014 Aug 18;289(32):22172-82. Epub 2014 Jun 18.

Cell Biology, Ophthalmology, and Biomedical Engineering, University of Virginia, Charlottesville, Virginia 22908

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http://dx.doi.org/10.1074/jbc.M114.570143DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4139230PMC
August 2014

Circulating microRNA as a biomarker of human growth hormone administration to patients.

Drug Test Anal 2014 Mar 12;6(3):234-8. Epub 2013 Mar 12.

University of Virginia School of Medicine, Charlottesville, VA, USA.

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http://dx.doi.org/10.1002/dta.1469DOI Listing
March 2014

The urine microRNA profile may help monitor post-transplant renal graft function.

Kidney Int 2014 Feb 11;85(2):439-49. Epub 2013 Sep 11.

Translational Genomics Transplant Laboratory, Transplant Division, Department of Surgery, University of Virginia, Charlottesville, Virginia, USA.

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http://dx.doi.org/10.1038/ki.2013.338DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3946645PMC
February 2014

Effects of stretch and shortening on gene expression in intact myocardium.

Physiol Genomics 2014 Jan 3;46(2):57-65. Epub 2013 Dec 3.

Department of Biomedical Engineering, University of Virginia, Charlottesville, Virginia;

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http://dx.doi.org/10.1152/physiolgenomics.00103.2013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3921349PMC
January 2014

Animal models of axon regeneration after spinal cord injury.

Neurosci Bull 2013 Aug 28;29(4):436-44. Epub 2013 Jul 28.

Miami Project to Cure Paralysis, Department of Neurological Surgery, University of Miami School of Medicine, Miami, FL 33136, USA.

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http://dx.doi.org/10.1007/s12264-013-1365-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3920733PMC
August 2013

Diacylglycerol kinase α is a critical signaling node and novel therapeutic target in glioblastoma and other cancers.

Cancer Discov 2013 Jul 4;3(7):782-97. Epub 2013 Apr 4.

Division of Neuro-Oncology, Department of Neurology, College of Nursing and Health Professions, University of Southern Indiana, Evansville, Indiana, USA.

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http://dx.doi.org/10.1158/2159-8290.CD-12-0215DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3710531PMC
July 2013

Hepatocyte growth factor sensitizes brain tumors to c-MET kinase inhibition.

Clin Cancer Res 2013 Mar 5;19(6):1433-44. Epub 2013 Feb 5.

Department of Microbiology, Immunology and Cancer Biology, University of Virginia, Charlottesville, Virginia 22908, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-12-2832DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3602223PMC
March 2013

The epidemiology of caving injuries in the United States.

Wilderness Environ Med 2012 Sep 15;23(3):215-22. Epub 2012 Jun 15.

Department of Emergence Medicine, University of Rochester, Rochester, NY, USA.

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http://dx.doi.org/10.1016/j.wem.2012.03.004DOI Listing
September 2012

Role of myelin-associated inhibitors in axonal repair after spinal cord injury.

Exp Neurol 2012 May 7;235(1):33-42. Epub 2011 May 7.

University of California San Diego, Department of Neurosciences, 9500 Gilman Drive, MC 0691, La Jolla, CA 92093-0691, USA.

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http://dx.doi.org/10.1016/j.expneurol.2011.05.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3170678PMC
May 2012

Genetic inactivation of IL-1 signaling enhances atherosclerotic plaque instability and reduces outward vessel remodeling in advanced atherosclerosis in mice.

J Clin Invest 2012 Jan 27;122(1):70-9. Epub 2011 Dec 27.

Department of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, Virginia 22908, USA.

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http://dx.doi.org/10.1172/JCI43713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3248279PMC
January 2012

Molecular prediction for atherogenic risks across different cell types of leukocytes.

BMC Med Genomics 2012 Jan 13;5. Epub 2012 Jan 13.

Department of Public Health Sciences, University of Virginia, Charlottesville, USA.

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http://dx.doi.org/10.1186/1755-8794-5-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271975PMC
January 2012

In vitro transcriptomic prediction of hepatotoxicity for early drug discovery.

J Theor Biol 2011 Dec 27;290:27-36. Epub 2011 Aug 27.

Department of Biophysics, University of Virginia, Charlottesville, VA, USA.

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http://dx.doi.org/10.1016/j.jtbi.2011.08.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3386613PMC
December 2011

Pilot analysis of the plasma metabolite profiles associated with emphysematous Chronic Obstructive Pulmonary Disease phenotype.

Biochem Biophys Res Commun 2011 Oct 8;413(4):588-93. Epub 2011 Sep 8.

Georgetown University, Drug Discovery Program, Lombardi Comprehensive Cancer Center, 3970 Reservoir Road, NW, NRB EP15, Washington, DC 20057, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S0006291X1101577
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http://dx.doi.org/10.1016/j.bbrc.2011.09.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3199021PMC
October 2011

Enhanced peptide quantification using spectral count clustering and cluster abundance.

BMC Bioinformatics 2011 Oct 28;12:423. Epub 2011 Oct 28.

Department of Statistics, Seoul National University, Korea.

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http://dx.doi.org/10.1186/1471-2105-12-423DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3234305PMC
October 2011

Multi-gene expression-based statistical approaches to predicting patients' clinical outcomes and responses.

Methods Mol Biol 2010 ;620:471-84

Department of Biophysics, University of Virginia, Charlottesville, VA, USA.

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http://dx.doi.org/10.1007/978-1-60761-580-4_16DOI Listing
November 2010

Multigene expression-based predictors for sensitivity to Vorinostat and Velcade in non-small cell lung cancer.

Mol Cancer Ther 2010 Oct 16;9(10):2834-43. Epub 2010 Aug 16.

Department of Surgery, University of Virginia, Charlottesville, Virginia 22908-0679, USA.

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http://dx.doi.org/10.1158/1535-7163.MCT-10-0327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2953585PMC
October 2010

PTEN deletion enhances the regenerative ability of adult corticospinal neurons.

Nat Neurosci 2010 Sep 8;13(9):1075-81. Epub 2010 Aug 8.

F.M. Kirby Neurobiology Center, Children's Hospital, and Department of Neurology, Harvard Medical School, Boston, Massachusetts, USA.

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http://dx.doi.org/10.1038/nn.2603DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2928871PMC
September 2010

Developmental expression of the oligodendrocyte myelin glycoprotein in the mouse telencephalon.

Cereb Cortex 2010 Aug 5;20(8):1769-79. Epub 2009 Nov 5.

Molecular and Cellular Neurobiotechnology laboratory, Institute for Bioengineering of Catalonia (IBEC), Barcelona E-08028, Spain.

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http://dx.doi.org/10.1093/cercor/bhp246DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2901018PMC
August 2010

Transient demyelination increases the efficiency of retrograde AAV transduction.

Mol Ther 2010 Aug 25;18(8):1496-500. Epub 2010 May 25.

Department of Neurosciences, University of California-San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1038/mt.2010.97DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2927074PMC
August 2010

Combined genetic attenuation of myelin and semaphorin-mediated growth inhibition is insufficient to promote serotonergic axon regeneration.

J Neurosci 2010 Aug;30(32):10899-904

Department of Neurosciences, University of California, San Diego, School of Medicine, La Jolla, California 92093, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.2269-10.2010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2974627PMC
August 2010

Assessing spinal axon regeneration and sprouting in Nogo-, MAG-, and OMgp-deficient mice.

Neuron 2010 Jun;66(5):663-70

Department of Neurosciences, School of Medicine, University of California, San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1016/j.neuron.2010.05.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2896331PMC
June 2010

ReSASC: a resampling-based algorithm to determine differential protein expression from spectral count data.

Proteomics 2010 Mar;10(6):1212-22

Division of Inflammation Biology, La Jolla Institute for Allergy and Immunology, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1002/pmic.200900328DOI Listing
March 2010

The COXEN principle: translating signatures of in vitro chemosensitivity into tools for clinical outcome prediction and drug discovery in cancer.

Cancer Res 2010 Mar 16;70(5):1753-8. Epub 2010 Feb 16.

Department of Molecular Physiology, University of Virginia, Charlottesville, Virginia 22908, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-09-3562DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2831138PMC
March 2010

Generation of an OMgp allelic series in mice.

Genesis 2009 Nov;47(11):751-6

Department of Neurosciences, University of California San Diego, School of Medicine, La Jolla, California 92093-0691, USA.

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http://doi.wiley.com/10.1002/dvg.20557
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http://dx.doi.org/10.1002/dvg.20557DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788017PMC
November 2009

Double error shrinkage method for identifying protein binding sites observed by tiling arrays with limited replication.

Bioinformatics 2009 Oct 10;25(19):2486-91. Epub 2009 Aug 10.

Department of Public Health Sciences, University of Virginia, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1093/bioinformatics/btp471DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2800349PMC
October 2009

Inference of large-scale gene regulatory networks using regression-based network approach.

J Bioinform Comput Biol 2009 Aug;7(4):717-35

Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, San 56-1, Shilim-dong, Korea.

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August 2009

Reassessment of corticospinal tract regeneration in Nogo-deficient mice.

J Neurosci 2009 Jul;29(27):8649-54

Department of Neurosciences, University of California San Diego, School of Medicine, La Jolla, California 92093, USA.

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http://dx.doi.org/10.1523/JNEUROSCI.1864-09.2009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2747754PMC
July 2009

Utilizing the molecular gateway: the path to personalized cancer management.

Clin Chem 2009 Apr 26;55(4):684-97. Epub 2009 Feb 26.

Departments of Molecular Physiology and Biological Physics; and Public Health Sciences, University of Virginia Health Sciences Center, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1373/clinchem.2008.118554DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4529063PMC
April 2009

Axon regeneration after spinal cord injury: insight from genetically modified mouse models.

Restor Neurol Neurosci 2008 ;26(2-3):175-82

Department of Neurosciences, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0691, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2646464PMC
December 2008

Molecular credentialing of rodent bladder carcinogenesis models.

Neoplasia 2008 Aug;10(8):838-46

Department of Public Health Sciences, Division of Biostatistics, University of Virginia School of Medicine, Charlottesville, VA 22908-0717, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2481571PMC
http://dx.doi.org/10.1593/neo.08432DOI Listing
August 2008

Data mining in genomics.

Clin Lab Med 2008 Mar;28(1):145-66, viii

Division of Biostatistics and Epidemiology, Department of Public Health Sciences, Box 800717, University of Virginia, Charlottesville, VA 22908, USA.

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http://dx.doi.org/10.1016/j.cll.2007.10.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2253491PMC
March 2008

Response projected clustering for direct association with physiological and clinical response data.

BMC Bioinformatics 2008 Jan 31;9:76. Epub 2008 Jan 31.

Department of Statistics, Seoul National University, Silim-dong, Kwanak-gu, Seoul, 151-747, Korea.

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http://dx.doi.org/10.1186/1471-2105-9-76DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2275250PMC
January 2008

A strategy for predicting the chemosensitivity of human cancers and its application to drug discovery.

Proc Natl Acad Sci U S A 2007 Aug 31;104(32):13086-91. Epub 2007 Jul 31.

Department of Public Health Sciences, University of Virginia, Charlottesville, VA 22908, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0610292104
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http://dx.doi.org/10.1073/pnas.0610292104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1941805PMC
August 2007

Fibrinogen inhibits neurite outgrowth via beta 3 integrin-mediated phosphorylation of the EGF receptor.

Proc Natl Acad Sci U S A 2007 Jul 2;104(28):11814-9. Epub 2007 Jul 2.

Department of Pharmacology, University of California at San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1073/pnas.0704045104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1913857PMC
July 2007

Transcript and protein expression profiles of the NCI-60 cancer cell panel: an integromic microarray study.

Mol Cancer Ther 2007 Mar 5;6(3):820-32. Epub 2007 Mar 5.

Genomics and Bioinformatics Group, Laboratory of Molecular Pharmacology, Center for Cancer Research, National Cancer Institute/NIH, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1158/1535-7163.MCT-06-0650DOI Listing
March 2007