Jack C Dekkers

Jack C M Dekkers

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Jack C Dekkers

Jack C M Dekkers

Publications by authors named "Jack C M Dekkers"

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1PubMed Central Citations

Detection of copy number variations in brown and white layers based on genotyping panels with different densities.

Genet Sel Evol 2018 Nov 6;50(1):54. Epub 2018 Nov 6.

Department of Animal Science, Iowa State University, 806 Stange Road, 239E Kildee Hall, Ames, IA, 50010, USA.

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https://gsejournal.biomedcentral.com/articles/10.1186/s12711
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http://dx.doi.org/10.1186/s12711-018-0428-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6219011PMC
November 2018

Genetic basis of resistance to avian influenza in different commercial varieties of layer chickens.

Poult Sci 2018 Oct;97(10):3421-3428

Department of Animal Science, Iowa State University, Ames, IA 50011-3150, USA.

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http://dx.doi.org/10.3382/ps/pey233DOI Listing
October 2018

Genome-wide mapping of quantitative trait loci in admixed populations using mixed linear model and Bayesian multiple regression analysis.

Genet Sel Evol 2018 06 19;50(1):32. Epub 2018 Jun 19.

Department of Animal Science, Iowa State University, Ames, IA, 50010, USA.

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http://dx.doi.org/10.1186/s12711-018-0402-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006859PMC
June 2018

Genomic prediction of avian influenza infection outcome in layer chickens.

Genet Sel Evol 2018 05 2;50(1):21. Epub 2018 May 2.

Department of Animal Science, Iowa State University, 806 Stange Road, 239E Kildee Hall, Ames, IA, 50010, USA.

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http://dx.doi.org/10.1186/s12711-018-0393-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930871PMC
May 2018

Pigs with Severe Combined Immunodeficiency Are Impaired in Controlling Influenza A Virus Infection.

J Innate Immun 2017 17;9(2):193-202. Epub 2016 Dec 17.

Virus and Prion Diseases of Livestock Research Unit, National Animal Disease Center, USDA, ARS, Ames, IA, USA.

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http://dx.doi.org/10.1159/000451007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5330784PMC
November 2017

Whole Genome Association Studies of Residual Feed Intake and Related Traits in the Pig.

PLoS One 2013 26;8(6):e61756. Epub 2013 Jun 26.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0061756PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694077PMC
October 2017

A Hypothesis and Review of the Relationship between Selection for Improved Production Efficiency, Coping Behavior, and Domestication.

Front Genet 2017 28;8:134. Epub 2017 Sep 28.

Department of Animal Science, Iowa State University, Ames, IA, United States.

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http://dx.doi.org/10.3389/fgene.2017.00134DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5624995PMC
September 2017

A high-quality annotated transcriptome of swine peripheral blood.

BMC Genomics 2017 06 24;18(1):479. Epub 2017 Jun 24.

Department of Animal Science, Iowa State University, 2255 Kildee Hall, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1186/s12864-017-3863-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5483264PMC
June 2017

Mixture models detect large effect QTL better than GBLUP and result in more accurate and persistent predictions.

J Anim Sci Biotechnol 2016 11;7. Epub 2016 Feb 11.

Department of Animal Science, Iowa State University, 225D Kildee Hall, Ames, IA 50011 USA.

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http://dx.doi.org/10.1186/s40104-016-0066-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750167PMC
February 2016

Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake.

BMC Genomics 2016 Jan 22;17:73. Epub 2016 Jan 22.

Department of Animal Science, Iowa State University, 2255 Kildee Hall, Ames, IA, 50011, USA.

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http://dx.doi.org/10.1186/s12864-016-2395-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724083PMC
January 2016

Linkage disequilibrium in crossbred and pure line chickens.

Genet Sel Evol 2015 Feb 26;47:11. Epub 2015 Feb 26.

Department of Animal and Food Sciences, University of Delaware, Newark, DE, 19716, USA.

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http://dx.doi.org/10.1186/s12711-015-0098-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4341223PMC
February 2015

Porcine reproductive and respiratory syndrome virus replication and quasispecies evolution in pigs that lack adaptive immunity.

Virus Res 2015 Jan 14;195:246-9. Epub 2014 Oct 14.

Department of Diagnostic Medicine and Pathobiology, College of Veterinary Medicine, Kansas State University, Manhattan, KS 66506, United States. Electronic address:

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http://dx.doi.org/10.1016/j.virusres.2014.10.006DOI Listing
January 2015

Applied animal genomics: results from the field.

Annu Rev Anim Biosci 2014 Feb 2;2:105-39. Epub 2013 Dec 2.

Department of Animal Science, University of California, Davis, California 95616; email: ,

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http://dx.doi.org/10.1146/annurev-animal-022513-114119DOI Listing
February 2014

A least squares regression model to detect quantitative trait Loci with polar overdominance in a cross of outbred breeds: simulation.

Asian-Australas J Anim Sci 2013 Nov;26(11):1536-44

School of Biotechnology, Yeungnam University, Gyeongsan, Gyeongbuk, Korea.

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http://dx.doi.org/10.5713/ajas.2013.13356DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4093823PMC
November 2013

Pedigree and genomic analyses of feed consumption and residual feed intake in laying hens.

Poult Sci 2013 Sep;92(9):2270-5

Department of Animal Science, Iowa State University, Ames, IA 50011-3150, USA.

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http://dx.doi.org/10.3382/ps.2013-03085DOI Listing
September 2013

Genome-wide association study for Marek's disease mortality in layer chickens.

Avian Dis 2013 Jun;57(2 Suppl):395-400

Department of Genetic and Animal Breeding, Poznan University of Life Sciences, Wolynska Street 33, 60-637 Poznan, Poland.

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http://dx.doi.org/10.1637/10409-100312-Reg.1DOI Listing
June 2013

A fast EM algorithm for BayesA-like prediction of genomic breeding values.

PLoS One 2012 9;7(11):e49157. Epub 2012 Nov 9.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0049157PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494698PMC
May 2013

Genomic selection of purebred animals for crossbred performance in the presence of dominant gene action.

Genet Sel Evol 2013 Apr 26;45:11. Epub 2013 Apr 26.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA, USA.

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http://www.gsejournal.org/content/45/1/11
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http://dx.doi.org/10.1186/1297-9686-45-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3673865PMC
April 2013

A hierarchical semiparametric model for incorporating intergene information for analysis of genomic data.

Biometrics 2012 Dec 20;68(4):1168-77. Epub 2012 Sep 20.

BioStat Solutions, Inc., MD 21771, USA.

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http://dx.doi.org/10.1111/j.1541-0420.2012.01778.xDOI Listing
December 2012

Genome-wide association study of insect bite hypersensitivity in two horse populations in the Netherlands.

Genet Sel Evol 2012 Oct 30;44:31. Epub 2012 Oct 30.

Animal Breeding and Genomics Centre, Wageningen University, P,O, Box 338, Wageningen, 6700 AH, the Netherlands.

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http://dx.doi.org/10.1186/1297-9686-44-31DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3524047PMC
October 2012

Application of genomics tools to animal breeding.

Authors:
Jack C M Dekkers

Curr Genomics 2012 May;13(3):207-12

Department of Animal Science, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.2174/138920212800543057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3382275PMC
May 2012

Persistence of accuracy of genomic estimated breeding values over generations in layer chickens.

Genet Sel Evol 2011 Jun 21;43:23. Epub 2011 Jun 21.

Department of Genetics and Animal Breeding, Poznan University of Life Sciences, Wolynska st, 33, 60-637 Poznan, Poland.

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http://dx.doi.org/10.1186/1297-9686-43-23DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3144444PMC
June 2011

Haplotype inference in crossbred populations without pedigree information.

Genet Sel Evol 2009 Aug 11;41:40. Epub 2009 Aug 11.

Animal Breeding and Genomics Centre, Wageningen University, Wageningen, The Netherlands.

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http://dx.doi.org/10.1186/1297-9686-41-40DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2741458PMC
August 2009

Genomic selection of purebreds for crossbred performance.

Genet Sel Evol 2009 Jan 15;41:12. Epub 2009 Jan 15.

Department of Animal Science, Iowa State University, Ames, IA 50011-3150, USA.

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http://www.gsejournal.org/content/41/1/12
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http://dx.doi.org/10.1186/1297-9686-41-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2730054PMC
January 2009

Interval mapping of quantitative trait loci with selective DNA pooling data.

Genet Sel Evol 2007 Nov-Dec;39(6):685-709. Epub 2007 Dec 6.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa 50011, USA.

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http://dx.doi.org/10.1051/gse:2007026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2682814PMC
February 2008

Linkage disequilibrium in related breeding lines of chickens.

Genetics 2007 Dec 18;177(4):2161-9. Epub 2007 Oct 18.

Department of Animal Science, Iowa State University, Ames 50010, USA.

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http://dx.doi.org/10.1534/genetics.107.082206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2219483PMC
December 2007

Global transcriptional response of porcine mesenteric lymph nodes to Salmonella enterica serovar Typhimurium.

Genomics 2007 Jul 17;90(1):72-84. Epub 2007 May 17.

Department of Animal Science and Center for Integrated Animal Genomics Iowa State University, Ames, IA 50010, USA.

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http://dx.doi.org/10.1016/j.ygeno.2007.03.018DOI Listing
July 2007

Pooling mRNA in microarray experiments and its effect on power.

Bioinformatics 2007 May 7;23(10):1217-24. Epub 2007 Mar 7.

Department of Statistics, Iowa State University, USA.

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http://dx.doi.org/10.1093/bioinformatics/btm081DOI Listing
May 2007

Associations of myostatin gene polymorphisms with performance and mortality traits in broiler chickens.

Genet Sel Evol 2007 Jan-Feb;39(1):73-89. Epub 2007 Jan 11.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1051/gse:2006029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2739435PMC
March 2007

Comparison of methods for analysis of selective genotyping survival data.

Genet Sel Evol 2006 Nov-Dec;38(6):637-55. Epub 2006 Nov 28.

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, USA.

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http://dx.doi.org/10.1051/gse:200626DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2689268PMC
February 2007

Combined line-cross and half-sib QTL analysis of crosses between outbred lines.

Genet Res 2005 Jun;85(3):235-48

Department of Animal Science, Center for Integrated Animal Genomics, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1017/S0016672305007597DOI Listing
June 2005

A study on the minimum number of loci required for genetic evaluation using a finite locus model.

Genet Sel Evol 2004 Jul-Aug;36(4):395-414

Department of Animal Science, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1051/gse:2004008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2697210PMC
January 2005

Optimizing purebred selection for crossbred performance using QTL with different degrees of dominance.

Genet Sel Evol 2004 May-Jun;36(3):297-324

Department of Animal Science, 225C Kildee Hall, Iowa State University, Ames, IA 50011, USA.

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http://dx.doi.org/10.1051/gse:2004003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2697203PMC
December 2004

Investigation of obesity candidate genes on porcine fat deposition quantitative trait loci regions.

Obes Res 2004 Dec;12(12):1981-94

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa 50011-3150, USA.

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http://dx.doi.org/10.1038/oby.2004.249DOI Listing
December 2004

Polar overdominant inheritance of a DLK1 polymorphism is associated with growth and fatness in pigs.

Mamm Genome 2004 Jul;15(7):552-9

Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University, Ames, Iowa 50011, USA.

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http://link.springer.com/content/pdf/10.1007%2Fs00335-004-23
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July 2004

Tests of candidate genes in breed cross populations for QTL mapping in livestock.

Mamm Genome 2003 Jul;14(7):472-82

Department of Animal Science, 225C Kildee Hall, Iowa State University, Ames, Iowa, 50011, USA.

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http://dx.doi.org/10.1007/s00335-002-2215-yDOI Listing
July 2003

A method to optimize selection on multiple identified quantitative trait loci.

Genet Sel Evol 2002 Mar-Apr;34(2):145-70

Department of Animal Science, 225C Kildee Hall, Iowa State University Ames, IA 50011, USA.

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http://dx.doi.org/10.1051/gse:2002001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705425PMC
August 2002

Optimal selection on two quantitative trait loci with linkage.

Genet Sel Evol 2002 Mar-Apr;34(2):171-92

Department of Animal Science, 225 Kildee Hall, Iowa State University Ames, IA 50011, USA.

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http://dx.doi.org/10.1051/gse:2002002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705426PMC
August 2002

The use of molecular genetics in the improvement of agricultural populations.

Nat Rev Genet 2002 Jan;3(1):22-32

Department of Animal Science, Iowa State University, 225 Kildee Hall, Ames, Iowa 50011, USA.

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http://www.nature.com/articles/nrg701
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http://dx.doi.org/10.1038/nrg701DOI Listing
January 2002