Ivana V Yang

Ivana V Yang

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Ivana V Yang

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Gender-specific associations between polymorphisms in the Toll-like receptor (TLR) genes and lung function among workers in swine operations.

J Toxicol Environ Health A 2018 12;81(22):1186-1198. Epub 2018 Nov 12.

e School of Public Health , University of Alberta , Edmonton , Alberta , Canada.

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http://dx.doi.org/10.1080/15287394.2018.1544523DOI Listing
August 2019

Resequencing Study Confirms That Host Defense and Cell Senescence Gene Variants Contribute to the Risk of Idiopathic Pulmonary Fibrosis.

Authors:
Camille Moore Rachel Z Blumhagen Ivana V Yang Avram Walts Julie Powers Tarik Walker Makenna Bishop Pamela Russell Brian Vestal Jonathan Cardwell Cheryl R Markin Susan K Mathai Marvin I Schwarz Mark P Steele Joyce Lee Kevin K Brown James E Loyd James D Crapo Edwin K Silverman Michael H Cho Judith A James Joel M Guthridge Joy D Cogan Jonathan A Kropski Jeffrey J Swigris Carol Bair Dong Soon Kim Wonjun Ji Hocheol Kim Jin Woo Song Lisa A Maier Karin A Pacheco Nikhil Hirani Azin S Poon Feng Li R Gisli Jenkins Rebecca Braybrooke Gauri Saini Toby M Maher Philip L Molyneaux Peter Saunders Yingze Zhang Kevin F Gibson Daniel J Kass Mauricio Rojas John Sembrat Paul J Wolters Harold R Collard John S Sundy Thomas O'Riordan Mary E Strek Imre Noth Shwu-Fan Ma Mary K Porteous Maryl E Kreider Namrata B Patel Yoshikazu Inoue Masaki Hirose Toru Arai Shinobu Akagawa Oliver Eickelberg Isis Enlil Fernandez Jürgen Behr Nesrin Mogulkoc Tamera J Corte Ian Glaspole Sara Tomassetti Claudia Ravaglia Venerino Poletti Bruno Crestani Raphael Borie Caroline Kannengiesser Helen Parfrey Christine Fiddler Doris Rassl Maria Molina-Molina Carlos Machahua Ana Montes Worboys Gunnar Gudmundsson Helgi J Isaksson David J Lederer Anna J Podolanczuk Sydney B Montesi Elisabeth Bendstrup Vivi Danchel Moises Selman Annie Pardo Michael T Henry Michael P Keane Peter Doran Martina Vašáková Martina Sterclova Christopher J Ryerson Pearce G Wilcox Tsukasa Okamoto Haruhiko Furusawa Yasunari Miyazaki Geoffrey Laurent Svetlana Baltic Cecilia Prele Yuben Moodley Barry S Shea Ken Ohta Maho Suzukawa Osamu Narumoto Steven D Nathan Drew C Venuto Merte L Woldehanna Nurdan Kokturk Joao A de Andrade Tracy Luckhardt Tejaswini Kulkarni Francesco Bonella Seamus C Donnelly Aoife McElroy Michelle E Armstong Alvaro Aranda Roberto G Carbone Francesco Puppo Kenneth B Beckman Deborah A Nickerson Tasha E Fingerlin David A Schwartz

Am J Respir Crit Care Med 2019 Jul;200(2):199-208

1 National Jewish Health, Denver, Colorado.

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http://dx.doi.org/10.1164/rccm.201810-1891OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6635791PMC
July 2019

Selective Regulation of the Airway Mucin MUC5B in the Distal Airway.

Am J Respir Crit Care Med 2019 Jul;200(2):129-131

1 Department of Medicine University of Colorado School of Medicine Aurora, Colorado and.

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http://dx.doi.org/10.1164/rccm.201904-0809EDDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6635792PMC
July 2019

Epigenome-wide meta-analysis of DNA methylation and childhood asthma.

J Allergy Clin Immunol 2019 Jun 21;143(6):2062-2074. Epub 2018 Dec 21.

Division of Intramural Research, National Institute of Environmental Health Sciences, National Institutes of Health, Department of Health and Human Services, Research Triangle Park, NC. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00916749183278
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http://dx.doi.org/10.1016/j.jaci.2018.11.043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6556405PMC
June 2019

DNA methylation signatures of atopy and asthma.

Authors:
Ivana V Yang

Lancet Respir Med 2019 Apr 21;7(4):289-290. Epub 2018 Dec 21.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA; Department of Epidemiology, Colorado School of Public Health, Aurora, CO, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22132600183050
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http://dx.doi.org/10.1016/S2213-2600(18)30504-6DOI Listing
April 2019

Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight.

Authors:
Leanne K Küpers Claire Monnereau Gemma C Sharp Paul Yousefi Lucas A Salas Akram Ghantous Christian M Page Sarah E Reese Allen J Wilcox Darina Czamara Anne P Starling Alexei Novoloaca Samantha Lent Ritu Roy Cathrine Hoyo Carrie V Breton Catherine Allard Allan C Just Kelly M Bakulski John W Holloway Todd M Everson Cheng-Jian Xu Rae-Chi Huang Diana A van der Plaat Matthias Wielscher Simon Kebede Merid Vilhelmina Ullemar Faisal I Rezwan Jari Lahti Jenny van Dongen Sabine A S Langie Tom G Richardson Maria C Magnus Ellen A Nohr Zongli Xu Liesbeth Duijts Shanshan Zhao Weiming Zhang Michelle Plusquin Dawn L DeMeo Olivia Solomon Joosje H Heimovaara Dereje D Jima Lu Gao Mariona Bustamante Patrice Perron Robert O Wright Irva Hertz-Picciotto Hongmei Zhang Margaret R Karagas Ulrike Gehring Carmen J Marsit Lawrence J Beilin Judith M Vonk Marjo-Riitta Jarvelin Anna Bergström Anne K Örtqvist Susan Ewart Pia M Villa Sophie E Moore Gonneke Willemsen Arnout R L Standaert Siri E Håberg Thorkild I A Sørensen Jack A Taylor Katri Räikkönen Ivana V Yang Katerina Kechris Tim S Nawrot Matt J Silver Yun Yun Gong Lorenzo Richiardi Manolis Kogevinas Augusto A Litonjua Brenda Eskenazi Karen Huen Hamdi Mbarek Rachel L Maguire Terence Dwyer Martine Vrijheid Luigi Bouchard Andrea A Baccarelli Lisa A Croen Wilfried Karmaus Denise Anderson Maaike de Vries Sylvain Sebert Juha Kere Robert Karlsson Syed Hasan Arshad Esa Hämäläinen Michael N Routledge Dorret I Boomsma Andrew P Feinberg Craig J Newschaffer Eva Govarts Matthieu Moisse M Daniele Fallin Erik Melén Andrew M Prentice Eero Kajantie Catarina Almqvist Emily Oken Dana Dabelea H Marike Boezen Phillip E Melton Rosalind J Wright Gerard H Koppelman Letizia Trevisi Marie-France Hivert Jordi Sunyer Monica C Munthe-Kaas Susan K Murphy Eva Corpeleijn Joseph Wiemels Nina Holland Zdenko Herceg Elisabeth B Binder George Davey Smith Vincent W V Jaddoe Rolv T Lie Wenche Nystad Stephanie J London Debbie A Lawlor Caroline L Relton Harold Snieder Janine F Felix

Nat Commun 2019 04 23;10(1):1893. Epub 2019 Apr 23.

The Generation R Study Group, Erasmus MC, University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1038/s41467-019-09671-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478731PMC
April 2019

FUT2 Variants Confer Susceptibility to Familial Otitis Media.

Am J Hum Genet 2018 11 25;103(5):679-690. Epub 2018 Oct 25.

Department of Otorhinolaryngology, Head and Neck Surgery, School of Medicine, University of Maryland, Baltimore, MD 21201, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S00029297183032
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http://dx.doi.org/10.1016/j.ajhg.2018.09.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6217759PMC
November 2018

Meta-analysis of airway epithelium gene expression in asthma.

Eur Respir J 2018 05 17;51(5). Epub 2018 May 17.

Dept of Genetics, University of North Carolina, Chapel Hill, NC, USA.

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http://dx.doi.org/10.1183/13993003.01962-2017DOI Listing
May 2018

Role of epigenetics in the development of childhood asthma.

Curr Opin Allergy Clin Immunol 2018 04;18(2):132-138

Department of Medicine, University of Colorado School of Medicine.

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http://dx.doi.org/10.1097/ACI.0000000000000429DOI Listing
April 2018

Forkhead box protein 3 demethylation is associated with tolerance induction in peanut-induced intestinal allergy.

J Allergy Clin Immunol 2018 02 4;141(2):659-670.e2. Epub 2017 May 4.

Department of Pediatrics, National Jewish Health, Denver, Colo. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2017.04.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5671381PMC
February 2018

Cohort Profile: Pregnancy And Childhood Epigenetics (PACE) Consortium.

Authors:
Janine F Felix Bonnie R Joubert Andrea A Baccarelli Gemma C Sharp Catarina Almqvist Isabella Annesi-Maesano Hasan Arshad Nour Baïz Marian J Bakermans-Kranenburg Kelly M Bakulski Elisabeth B Binder Luigi Bouchard Carrie V Breton Bert Brunekreef Kelly J Brunst Esteban G Burchard Mariona Bustamante Leda Chatzi Monica Cheng Munthe-Kaas Eva Corpeleijn Darina Czamara Dana Dabelea George Davey Smith Patrick De Boever Liesbeth Duijts Terence Dwyer Celeste Eng Brenda Eskenazi Todd M Everson Fahimeh Falahi M Daniele Fallin Sara Farchi Mariana F Fernandez Lu Gao Tom R Gaunt Akram Ghantous Matthew W Gillman Semira Gonseth Veit Grote Olena Gruzieva Siri E Håberg Zdenko Herceg Marie-France Hivert Nina Holland John W Holloway Cathrine Hoyo Donglei Hu Rae-Chi Huang Karen Huen Marjo-Riitta Järvelin Dereje D Jima Allan C Just Margaret R Karagas Robert Karlsson Wilfried Karmaus Katerina J Kechris Juha Kere Manolis Kogevinas Berthold Koletzko Gerard H Koppelman Leanne K Küpers Christine Ladd-Acosta Jari Lahti Nathalie Lambrechts Sabine A S Langie Rolv T Lie Andrew H Liu Maria C Magnus Per Magnus Rachel L Maguire Carmen J Marsit Wendy McArdle Erik Melén Phillip Melton Susan K Murphy Tim S Nawrot Lorenza Nisticò Ellen A Nohr Björn Nordlund Wenche Nystad Sam S Oh Emily Oken Christian M Page Patrice Perron Göran Pershagen Costanza Pizzi Michelle Plusquin Katri Raikkonen Sarah E Reese Eva Reischl Lorenzo Richiardi Susan Ring Ritu P Roy Peter Rzehak Greet Schoeters David A Schwartz Sylvain Sebert Harold Snieder Thorkild I A Sørensen Anne P Starling Jordi Sunyer Jack A Taylor Henning Tiemeier Vilhelmina Ullemar Marina Vafeiadi Marinus H Van Ijzendoorn Judith M Vonk Annette Vriens Martine Vrijheid Pei Wang Joseph L Wiemels Allen J Wilcox Rosalind J Wright Cheng-Jian Xu Zongli Xu Ivana V Yang Paul Yousefi Hongmei Zhang Weiming Zhang Shanshan Zhao Golareh Agha Caroline L Relton Vincent W V Jaddoe Stephanie J London

Int J Epidemiol 2018 02;47(1):22-23u

National Institute of Environmental Health Sciences, National Institutes of Health, Department of Health and Human Services, Research Triangle Park, USA.

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http://dx.doi.org/10.1093/ije/dyx190DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5837319PMC
February 2018

Methylene-tetrahydrofolate reductase contributes to allergic airway disease.

PLoS One 2018 12;13(1):e0190916. Epub 2018 Jan 12.

Department of Medicine, School of Medicine, University of Colorado, Aurora, CO, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0190916PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5766142PMC
February 2018

Hypoxia-inducible factor 2-alpha-dependent induction of amphiregulin dampens myocardial ischemia-reperfusion injury.

Nat Commun 2018 02 26;9(1):816. Epub 2018 Feb 26.

Department of Anesthesiology, The University of Texas Health Science Center at Houston, McGovern Medical School, Houston, TX, USA.

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http://www.nature.com/articles/s41467-018-03105-2
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http://dx.doi.org/10.1038/s41467-018-03105-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5827027PMC
February 2018

Application of "Omics" and Systems Biology to Sarcoidosis Research.

Ann Am Thorac Soc 2017 Dec;14(Supplement_6):S445-S451

7 Pulmonary, Critical Care and Sleep Medicine, Yale School of Medicine, New Haven, Connecticut.

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http://dx.doi.org/10.1513/AnnalsATS.201707-567OTDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5822413PMC
December 2017

The environment, epigenome, and asthma.

J Allergy Clin Immunol 2017 Jul;140(1):14-23

Department of Medicine, University of Colorado, School of Medicine, Aurora, Colo; National Jewish Health, Denver, Colo; Department of Immunology, University of Colorado, Denver, Colo.

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http://dx.doi.org/10.1016/j.jaci.2017.05.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5673130PMC
July 2017

The nasal methylome and childhood atopic asthma.

J Allergy Clin Immunol 2017 May 13;139(5):1478-1488. Epub 2016 Oct 13.

Department of Medicine and University of Colorado, School of Medicine, Aurora, Colo; National Jewish Health, Denver, Colo; Department of Immunology, University of Colorado, Aurora, Colo. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2016.07.036DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5391298PMC
May 2017

The Nasal Methylome: A Key to Understanding Allergic Asthma.

Am J Respir Crit Care Med 2017 03;195(6):829-831

1 University of Colorado School of Medicine Aurora, Colorado and.

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http://dx.doi.org/10.1164/rccm.201608-1558LEDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5363969PMC
March 2017

Idiopathic Pulmonary Fibrosis: A Genetic Disease That Involves Mucociliary Dysfunction of the Peripheral Airways.

Physiol Rev 2016 10;96(4):1567-91

Department of Medicine, University of Colorado Denver, School of Medicine, Aurora, Colorado; National Jewish Health, Denver, Colorado; and Department of Immunology, University of Colorado Denver, School of Medicine, Aurora, Colorado.

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http://dx.doi.org/10.1152/physrev.00004.2016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5243224PMC
October 2016

Novel Innate Immune Genes Regulating the Macrophage Response to Gram Positive Bacteria.

Genetics 2016 09 29;204(1):327-36. Epub 2016 Jun 29.

Center for Genes, Environment, and Health, National Jewish Health, Denver, Colorado 80206 Department of Medicine, University of Colorado Anschutz Medical Campus, Aurora, Colorado 80045 Department of Epidemiology, Colorado School of Public Health, University of Colorado Denver, Aurora, Colorado 80045

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http://dx.doi.org/10.1534/genetics.115.185314DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012397PMC
September 2016

In Utero Cigarette Smoke Affects Allergic Airway Disease But Does Not Alter the Lung Methylome.

PLoS One 2015 7;10(12):e0144087. Epub 2015 Dec 7.

Department of Medicine, School of Medicine, University of Colorado, Aurora, Colorado, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0144087PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4671614PMC
June 2016

Unique DNA Methylation Patterns in Offspring of Hypertensive Pregnancy.

Clin Transl Sci 2015 Dec 6;8(6):740-5. Epub 2015 Nov 6.

Department of Medicine, University of Colorado School of Medicine, Aurora, Colorado, USA.

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http://dx.doi.org/10.1111/cts.12346DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703563PMC
December 2015

MUC5B and Idiopathic Pulmonary Fibrosis.

Ann Am Thorac Soc 2015 Nov;12 Suppl 2:S193-9

1 Department of Medicine, University of Colorado Denver, Aurora, Colorado.

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http://dx.doi.org/10.1513/AnnalsATS.201503-110AWDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4722833PMC
November 2015

Epigenetics in lung fibrosis: from pathobiology to treatment perspective.

Curr Opin Pulm Med 2015 Sep;21(5):454-62

aDepartment of Medicine, University of Colorado School of Medicine bDepartment of Epidemiology, Colorado School of Public Health, Aurora cCenter for Genes, Environment and Health, National Jewish Health, Denver, Colorado, USA.

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http://dx.doi.org/10.1097/MCP.0000000000000191DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4592772PMC
September 2015

Incorporating genetics into the identification and treatment of Idiopathic Pulmonary Fibrosis.

BMC Med 2015 Sep 24;13:191. Epub 2015 Sep 24.

Division of Pulmonary Sciences and Critical Care Medicine, Department of Medicine, University of Colorado Denver, Anschutz Medical Campus, 12631 East 17th Avenue, Aurora, CO, 80045, USA.

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http://dx.doi.org/10.1186/s12916-015-0434-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4581155PMC
September 2015

DNA methylation and childhood asthma in the inner city.

J Allergy Clin Immunol 2015 Jul 11;136(1):69-80. Epub 2015 Mar 11.

Department of Medicine, University of Colorado, School of Medicine, Aurora, Colo; Departments of Pediatrics and Medicine, National Jewish Health, Denver, Colo; Department of Immunology, University of Colorado, Aurora, Colo. Electronic address:

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http://dx.doi.org/10.1016/j.jaci.2015.01.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4494877PMC
July 2015

AKT network of genes and impaired myocardial contractility during murine acute Chagasic myocarditis.

Am J Trop Med Hyg 2015 Mar 12;92(3):523-9. Epub 2015 Jan 12.

Division of Infectious Diseases and Departments of Medicine and Immunology, University of Colorado, Denver, Colorado; Department of Epidemiology, Colorado School of Public Health, Denver, Colorado; Department of Pathology, Denver Health, Denver, Colorado.

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http://dx.doi.org/10.4269/ajtmh.14-0433DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4350542PMC
March 2015

The Toll-like receptor 4 polymorphism Asp299Gly but not Thr399Ile influences TLR4 signaling and function.

PLoS One 2014 2;9(4):e93550. Epub 2014 Apr 2.

Center for Genes, Environment and Health, National Jewish Health, Denver, Colorado, United States of America; Integrated Department of Immunology, University of Colorado and National Jewish Health, Denver, Colorado, United States of America; Department of Medicine, University of Colorado Denver, Aurora, Colorado, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0093550PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3973565PMC
February 2015

Assessment of microRNA differential expression and detection in multiplexed small RNA sequencing data.

RNA 2015 Feb 17;21(2):164-71. Epub 2014 Dec 17.

Bioinformatics Graduate Program, Boston University, Boston, Massachusetts 02215, USA Section of Computational Biomedicine, Boston University Medical Center, Boston, Massachusetts 02118, USA Department of Pathology and Laboratory Medicine, Boston University School of Medicine, Boston, Massachusetts 02118, USA

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http://dx.doi.org/10.1261/rna.046060.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4338344PMC
February 2015

Epigenetics of idiopathic pulmonary fibrosis.

Transl Res 2015 Jan 31;165(1):48-60. Epub 2014 Mar 31.

Department of Medicine, University of Colorado School of Medicine, Aurora, Colo; Department of Immunology, University of Colorado School of Medicine, Aurora, Colo.

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https://linkinghub.elsevier.com/retrieve/pii/S19315244140011
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http://dx.doi.org/10.1016/j.trsl.2014.03.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4182166PMC
January 2015

Stanniocalcin-1 is induced by hypoxia inducible factor in rat alveolar epithelial cells.

Biochem Biophys Res Commun 2014 Oct 22;452(4):1091-7. Epub 2014 Sep 22.

Department of Medicine, National Jewish Health, Denver, CO, USA; Department of Medicine, University of Colorado Denver, Aurora, CO, USA.

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http://dx.doi.org/10.1016/j.bbrc.2014.09.060DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4188510PMC
October 2014

Familial and sporadic idiopathic pulmonary fibrosis: making the diagnosis from peripheral blood.

BMC Genomics 2014 Oct 16;15:902. Epub 2014 Oct 16.

Division of Allergy, Pulmonary, and Critical Care, Vanderbilt University Medical Center, 1313 21st Avenue South, 1105 Oxford House, Nashville, TN, USA.

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http://dx.doi.org/10.1186/1471-2164-15-902DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4288625PMC
October 2014

NOS3 polymorphism, lung function, and exposure in swine operations: results of 2 studies.

J Allergy Clin Immunol 2014 Aug 24;134(2):485-8. Epub 2014 May 24.

School of Public Health, University of Alberta, Edmonton, Alberta, Canada. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00916749140056
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http://dx.doi.org/10.1016/j.jaci.2014.04.006DOI Listing
August 2014

Inhibition of peroxisome proliferator-activated receptor γ: a potential link between chronic maternal hypoxia and impaired fetal growth.

FASEB J 2014 Mar 4;28(3):1268-79. Epub 2013 Dec 4.

1Department of Medicine, University of Colorado-Denver, 12700 E 19th Ave., Mailstop 8611, 3rd Floor Research Complex 2, Aurora, CO 80045, USA.

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http://www.fasebj.org/doi/10.1096/fj.13-239749
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http://dx.doi.org/10.1096/fj.13-239749DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3929669PMC
March 2014

CruzDB: software for annotation of genomic intervals with UCSC genome-browser database.

Bioinformatics 2013 Dec 12;29(23):3003-6. Epub 2013 Sep 12.

Department of Medicine, University of Colorado Denver, School of Medicine, Denver, CO, USA and Molecular Oncology Program, University of Colorado Cancer Center, Aurora, CO, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt534DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3834799PMC
December 2013

Enterobacteriaceae bacteremias among cancer patients: an observational cohort study.

Int J Infect Dis 2013 Jun 10;17(6):e374-8. Epub 2013 Jan 10.

Division of Infectious Diseases, University of Colorado, 12700 E. 19th Avenue, Mail Stop B168, Aurora, Denver, CO 80045, USA.

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http://dx.doi.org/10.1016/j.ijid.2012.11.030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3632647PMC
June 2013

Role of macrophage receptor with collagenous structure in innate immune tolerance.

J Immunol 2013 Jun 10;190(12):6360-7. Epub 2013 May 10.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.

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http://dx.doi.org/10.4049/jimmunol.1202942DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3679202PMC
June 2013

Proteomic analysis of human bronchoalveolar lavage fluid after subsgemental exposure.

J Proteome Res 2013 May 24;12(5):2194-205. Epub 2013 Apr 24.

Division of Pulmonary, Allergy and Critical Care Medicine, Duke University Medical Center, Durham, North Carolina 27710, USA.

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http://dx.doi.org/10.1021/pr400066gDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822014PMC
May 2013

The promise of epigenetic therapies in treatment of idiopathic pulmonary fibrosis.

Am J Respir Crit Care Med 2013 Feb;187(4):336-8

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http://dx.doi.org/10.1164/rccm.201212-2272EDDOI Listing
February 2013

Ozone enhances pulmonary innate immune response to a Toll-like receptor-2 agonist.

Am J Respir Cell Mol Biol 2013 Jan 20;48(1):27-34. Epub 2012 Sep 20.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.

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http://dx.doi.org/10.1165/rcmb.2012-0187OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3547086PMC
January 2013

Association of Toll-like receptor 2 gene polymorphisms with lung function in workers in swine operations.

Ann Allergy Asthma Immunol 2013 Jan;110(1):44-50.e1

Department of Public Health Sciences, School of Public Health, University of Alberta, Edmonton, Alberta, Canada.

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http://dx.doi.org/10.1016/j.anai.2012.11.003DOI Listing
January 2013

The next generation of complex lung genetic studies.

Am J Respir Crit Care Med 2012 Dec 30;186(11):1087-94. Epub 2012 Aug 30.

Department of Medicine, University of Colorado Denver, 12700 East 19th Avenue, 8611, Aurora, CO 80045, USA.

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http://dx.doi.org/10.1164/rccm.201207-1178PPDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3530203PMC
December 2012

Epigenetic mechanisms and the development of asthma.

J Allergy Clin Immunol 2012 Dec 29;130(6):1243-55. Epub 2012 Sep 29.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.

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http://dx.doi.org/10.1016/j.jaci.2012.07.052DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3518374PMC
December 2012

Comb-p: software for combining, analyzing, grouping and correcting spatially correlated P-values.

Bioinformatics 2012 Nov 5;28(22):2986-8. Epub 2012 Sep 5.

Department of Medicine, University of Colorado, Denver, Anschutz Medical Campus, Aurora, CO 80045, USA.

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http://dx.doi.org/10.1093/bioinformatics/bts545DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3496335PMC
November 2012

Chagasic cardiomyopathy, from acute to chronic: is this mediated by host susceptibility factors?

Trans R Soc Trop Med Hyg 2012 Sep 21;106(9):521-7. Epub 2012 Jul 21.

University of Colorado Denver, 12700 E. 19th Avenue, Mail Stop B168, Aurora, CO 80045, USA.

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http://dx.doi.org/10.1016/j.trstmh.2012.06.006DOI Listing
September 2012

Pulmonary function reductions among potentially susceptible subgroups of agricultural workers in Colorado and Nebraska.

J Occup Environ Med 2012 May;54(5):632-41

Department of Environmental and Radiological Health Sciences, Colorado State University, Ft. Collins, CO 80523, USA.

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http://dx.doi.org/10.1097/JOM.0b013e31824d2e1cDOI Listing
May 2012

Epigenomics of idiopathic pulmonary fibrosis.

Authors:
Ivana V Yang

Epigenomics 2012 Apr;4(2):195-203

Center for Genes, Environment & Health & the Department of Medicine, National Jewish Health, Denver, CO, USA.

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http://dx.doi.org/10.2217/epi.12.10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3412586PMC
April 2012

Spatiotemporal inhibition of innate immunity signaling by the Tbc1d23 RAB-GAP.

J Immunol 2012 Mar 6;188(6):2905-13. Epub 2012 Feb 6.

Integrated Department of Immunology, National Jewish Health and University of Colorado, Denver, CO 80206, USA.

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http://www.jimmunol.org/cgi/doi/10.4049/jimmunol.1102595
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3293945PMC
March 2012

Gene expression profiles of RAW264.7 macrophages stimulated with preparations of LPS differing in isolation and purity.

Innate Immun 2012 Feb 14;18(1):80-8. Epub 2011 Jan 14.

National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA.

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http://dx.doi.org/10.1177/1753425910393540DOI Listing
February 2012

Sleep, immunology, and epigenetics: tip of an iceberg.

Authors:
Ivana V Yang

Am J Respir Crit Care Med 2012 Feb;185(3):243-5

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http://dx.doi.org/10.1164/rccm.201111-2028EDDOI Listing
February 2012

A locus on chromosome 9 is associated with differential response of 129S1/SvImJ and FVB/NJ strains of mice to systemic LPS.

Mamm Genome 2011 Oct 1;22(9-10):518-29. Epub 2011 Jul 1.

Center for Genes, Environment and Health and Department of Medicine, National Jewish Health, 1400 Jackson Street, A650, Denver, CO 80206, USA.

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http://dx.doi.org/10.1007/s00335-011-9340-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4157901PMC
October 2011

Identification of novel innate immune genes by transcriptional profiling of macrophages stimulated with TLR ligands.

Mol Immunol 2011 Sep 12;48(15-16):1886-95. Epub 2011 Jun 12.

Center for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, United States.

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http://dx.doi.org/10.1016/j.molimm.2011.05.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163807PMC
September 2011

Novel regulators of the systemic response to lipopolysaccharide.

Am J Respir Cell Mol Biol 2011 Aug 3;45(2):393-402. Epub 2010 Dec 3.

Center for Genes, Environment and Health, National Jewish Health, Denver, CO 80206, USA.

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http://dx.doi.org/10.1165/rcmb.2010-0342OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3175565PMC
August 2011

Epigenetic control of gene expression in the lung.

Am J Respir Crit Care Med 2011 May;183(10):1295-301

Center for Genes, Environment, and Health, National Jewish Health,Denver, CO 80206, USA.

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http://dx.doi.org/10.1164/rccm.201010-1579PPDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3114059PMC
May 2011

Identification of novel genes that mediate innate immunity using inbred mice.

Genetics 2009 Dec 5;183(4):1535-44. Epub 2009 Oct 5.

Department of Medicine, National Jewish Health, Denver, Colorado 80206, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2787437PMC
December 2009

Fine ambient particles induce oxidative stress and metal binding genes in human alveolar macrophages.

Am J Respir Cell Mol Biol 2009 Nov 27;41(5):544-52. Epub 2009 Feb 27.

Department of Medicine, Duke University Medical Center, Durham, North Carolina 27705, USA.

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http://dx.doi.org/10.1165/rcmb.2008-0064OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2778161PMC
November 2009

Fibroproliferation in LPS-induced airway remodeling and bleomycin-induced fibrosis share common patterns of gene expression.

Immunogenetics 2008 Jul 13;60(7):353-69. Epub 2008 Jun 13.

Department of Pediatrics/Neonatology, Duke University Medical Center, 403 Alex R. Sands Laboratory Building, DUMC 3373, Durham, NC 27710, USA.

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http://link.springer.com/10.1007/s00251-008-0293-3
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July 2008

Gene expression profiling of familial and sporadic interstitial pneumonia.

Am J Respir Crit Care Med 2007 Jan 22;175(1):45-54. Epub 2006 Sep 22.

Laboratory of Respiratory Biology, National Institute of Environmental Health Sciences, P.O. Box 12233, MD B3-08, Research Triangle Park, NC 27909, USA.

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http://dx.doi.org/10.1164/rccm.200601-062OCDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1899261PMC
January 2007

Using mouse genomics to understand idiopathic interstitial fibrosis.

Proc Am Thorac Soc 2007 Jan;4(1):92-100

Laboratory of Respiratory Biology, National Institute of Environmental Health Sciences, Research Triangle Park, North Carolina 27709, USA.

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http://dx.doi.org/10.1513/pats.200607-147JGDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2647620PMC
January 2007

Use of external controls in microarray experiments.

Authors:
Ivana V Yang

Methods Enzymol 2006 ;411:50-63

Laboratory of Respiratory Biology, National Institute of Environmental Health Sciences, National Institute of Health, Research Triangle Park, NC, USA.

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http://dx.doi.org/10.1016/S0076-6879(06)11004-6DOI Listing
December 2006

The transcriptional response to lipopolysaccharide reveals a role for interferon-gamma in lung neutrophil recruitment.

Am J Physiol Lung Cell Mol Physiol 2006 Oct 9;291(4):L677-82. Epub 2006 Jun 9.

National Institute of Environmental Health Sciences, Division of Pulmonary, Allergy, and Critical Care Medicine, Research Triangle Park, NC 27709, USA.

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http://dx.doi.org/10.1152/ajplung.00523.2005DOI Listing
October 2006

Multi-platform, multi-site, microarray-based human tumor classification.

Am J Pathol 2004 Jan;164(1):9-16

H. Lee Moffitt Cancer Center, University of South Florida, Tampa, Florida 33612-9497, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1602228PMC
http://dx.doi.org/10.1016/S0002-9440(10)63090-8DOI Listing
January 2004

Detection of attomole quantities [correction of quantitites] of DNA targets on gold microelectrodes by electrocatalytic nucleobase oxidation.

Anal Chem 2003 Dec;75(23):6586-92

Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599-3290, USA.

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http://dx.doi.org/10.1021/ac034918vDOI Listing
December 2003

Toward electrochemical resolution of two genes on one electrode: using 7-deaza analogues of guanine and adenine to prepare PCR products with differential redox activity.

Anal Chem 2002 Jan;74(2):347-54

Department of Chemistry, University of North Carolina at Chapel Hill, 27599-3290, USA.

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http://dx.doi.org/10.1021/ac0109063DOI Listing
January 2002