Ivan Smirnov

Ivan Smirnov

UNVERIFIED PROFILE

Are you Ivan Smirnov?   Register this Author

Register author
Ivan Smirnov

Ivan Smirnov

Publications by authors named "Ivan Smirnov"

Are you Ivan Smirnov?   Register this Author

83Publications

2615Reads

9Profile Views

Facile Access to Optically Active 2,6-Dialkyl-1,5-Diazacyclooctanes.

Chem Asian J 2019 Nov 13;14(22):4048-4054. Epub 2019 Aug 13.

Biofunctional Chemistry Laboratory, Alexander Butlerov Institute of Chemistry, Kazan Federal University, 18 Kremlyovskaya Street, Kazan, 420008, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/asia.201900938DOI Listing
November 2019

Charge-mediated proteasome targeting.

FASEB J 2019 Jun 27;33(6):6852-6866. Epub 2019 Feb 27.

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russian Federation.

View Article

Download full-text PDF

Source
https://www.fasebj.org/doi/10.1096/fj.201802237R
Publisher Site
http://dx.doi.org/10.1096/fj.201802237RDOI Listing
June 2019

Schools are segregated by educational outcomes in the digital space.

Authors:
Ivan Smirnov

PLoS One 2019 28;14(5):e0217142. Epub 2019 May 28.

Institute of Education, National Research University Higher School of Economics, Moscow, Russia.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0217142PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6538368PMC
May 2019

Parents mention sons more often than daughters on social media.

Proc Natl Acad Sci U S A 2019 02 22;116(6):2039-2041. Epub 2019 Jan 22.

Institute of Education, National Research University Higher School of Economics, Moscow 101000, Russia

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1804996116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369760PMC
February 2019

Two HLA Class II Gene Variants Are Independently Associated with Pediatric Osteosarcoma Risk.

Cancer Epidemiol Biomarkers Prev 2018 10 23;27(10):1151-1158. Epub 2018 Jul 23.

Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1055-9965.EPI-18-0306DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6170682PMC
October 2018

Genetic determinants of childhood and adult height associated with osteosarcoma risk.

Cancer 2018 09 12;124(18):3742-3752. Epub 2018 Oct 12.

Department of Epidemiology and Biostatistics, University of California at San Francisco, San Francisco, California.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/cncr.31645
Publisher Site
http://dx.doi.org/10.1002/cncr.31645DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6214707PMC
September 2018

Non-additive and epistatic effects of HLA polymorphisms contributing to risk of adult glioma.

J Neurooncol 2017 Nov 18;135(2):237-244. Epub 2017 Jul 18.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California, San Francisco, San Francisco, CA, 94158, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s11060-017-2569-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5665694PMC
November 2017

Evolution of inhibitor-resistant natural mutant forms of HIV-1 protease probed by pre-steady state kinetic analysis.

Biochimie 2017 Nov 24;142:125-134. Epub 2017 Aug 24.

SB RAS Institute of Chemical Biology and Fundamental Medicine, Novosibirsk, 630090, Russian Federation; Department of Natural Sciences, Novosibirsk State University, Novosibirsk, 630090, Russian Federation. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.biochi.2017.08.014DOI Listing
November 2017

Comprehensive Analysis of Hypermutation in Human Cancer.

Cell 2017 Nov 19;171(5):1042-1056.e10. Epub 2017 Oct 19.

Program in Genetics and Genome Biology, The Hospital for Sick Children, Toronto, ON, Canada; Department of Paediatric Laboratory Medicine, The Hospital for Sick Children, Toronto, ON, Canada; Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cell.2017.09.048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5849393PMC
November 2017

Formation of homophily in academic performance: Students change their friends rather than performance.

PLoS One 2017 30;12(8):e0183473. Epub 2017 Aug 30.

Section for Science of Complex Systems, Medical University of Vienna, Vienna, Austria.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0183473PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5576666PMC
October 2017

Administration of Myelin Basic Protein Peptides Encapsulated in Mannosylated Liposomes Normalizes Level of Serum TNF-α and IL-2 and Chemoattractants CCL2 and CCL4 in Multiple Sclerosis Patients.

Mediators Inflamm 2016 28;2016:2847232. Epub 2016 Apr 28.

Institute of Bioorganic Chemistry RAS, Moscow 117997, Russia; Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan 420012, Russia; Chemistry Department, Moscow State University, Moscow 119991, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1155/2016/2847232DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864531PMC
January 2017

Clonal and microclonal mutational heterogeneity in high hyperdiploid acute lymphoblastic leukemia.

Oncotarget 2016 Nov;7(45):72733-72745

Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, California, United States of America.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.18632/oncotarget.12238DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5341940PMC
November 2016

The role of AKT isoforms in glioblastoma: AKT3 delays tumor progression.

J Neurooncol 2016 10 15;130(1):43-52. Epub 2016 Jul 15.

Department of Neurology, University of Arizona College of Medicine, 550 E. Van Buren St, Phoenix, AZ, 85004, USA.

View Article

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5071179PMC
http://dx.doi.org/10.1007/s11060-016-2220-zDOI Listing
October 2016

Genetic Variation Associated with Longer Telomere Length Increases Risk of Chronic Lymphocytic Leukemia.

Cancer Epidemiol Biomarkers Prev 2016 07 13;25(7):1043-9. Epub 2016 May 13.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California, San Francisco, San Francisco, California. Program in Neurologic Oncology, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1055-9965.EPI-15-1329DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5008454PMC
July 2016

Common genetic variants associated with telomere length confer risk for neuroblastoma and other childhood cancers.

Carcinogenesis 2016 06 1;37(6):576-582. Epub 2016 Apr 1.

Program in Pediatric Malignancies, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, CA 94143, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/carcin/bgw037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876988PMC
June 2016

AKT pathway genes define 5 prognostic subgroups in glioblastoma.

PLoS One 2014 1;9(7):e100827. Epub 2014 Jul 1.

Department of Neurology, Barrow Neurological Institute, St. Joseph's Hospital and Medical Center, Phoenix, Arizona, United States of America; University of Arizona College of Medicine, Phoenix, Arizona, United States of America.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0100827PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4077731PMC
November 2015

A Heritable Missense Polymorphism in CDKN2A Confers Strong Risk of Childhood Acute Lymphoblastic Leukemia and Is Preferentially Selected during Clonal Evolution.

Cancer Res 2015 Nov 2;75(22):4884-94. Epub 2015 Nov 2.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California, San Francisco, San Francisco, California. Department of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, California. Institute for Human Genetics, University of California, San Francisco, San Francisco, California.

View Article

Download full-text PDF

Source
http://cancerres.aacrjournals.org/content/early/2015/11/01/0
Web Search
http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
Publisher Site
http://dx.doi.org/10.1158/0008-5472.CAN-15-1105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4651745PMC
November 2015

Glatiramer acetate and nanny proteins restrict access of the multiple sclerosis autoantigen myelin basic protein to the 26S proteasome.

Biomed Res Int 2014 8;2014:926394. Epub 2014 Sep 8.

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, V-437, Moscow 117871, Russia ; Kazan Federal University, Kazan, Republic of Tatarstan 420008, Russia ; Institute of Gene Biology, Russian Academy of Sciences, Moscow 117334, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1155/2014/926394DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4172982PMC
June 2015

Glioma Groups Based on 1p/19q, IDH, and TERT Promoter Mutations in Tumors.

N Engl J Med 2015 Jun 10;372(26):2499-508. Epub 2015 Jun 10.

From the Departments of Health Sciences Research (J.E.E.-P., P.A.D., H.S., M.L.K.), Laboratory Medicine and Pathology (D.H.L., G.S., A.A.C., T.M.K., C.E.P., A.R.C., C.H., C.G., R.B.J.), Neurology (D.H.L., B.P.O.), and Oncology (J.C.B.), Mayo Clinic, Rochester, MN; the Departments of Neurological Surgery (A.M.M., K.M.W., T.R., I.V.S., H.M.H., L.S.M., S.Z., A.P., M.S.B., S.M.C., M.D.P., J.K.W., M.R.W.), Epidemiology and Biostatistics (A.M.M., P.M.B., J.W., J.K.W., M.R.W.) and Pathology (M.P., R.M., G.F.R., A.P., T.T.) and the Institute of Human Genetics (J.W., J.K.W., M.R.W.), University of California, San Francisco, and the Bioinformatics Core, Gladstone Institutes (A.R.P.) - all in San Francisco; and the Department of Pathology and Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York (J.T.H.).

View Article

Download full-text PDF

Source
http://www.nejm.org/doi/10.1056/NEJMoa1407279
Publisher Site
http://dx.doi.org/10.1056/NEJMoa1407279DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489704PMC
June 2015

Ubiquitin-independent proteosomal degradation of myelin basic protein contributes to development of neurodegenerative autoimmunity.

FASEB J 2015 May 29;29(5):1901-13. Epub 2015 Jan 29.

*Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; Kazan Federal University, Kazan, Republic of Tatarstan, Russia; Institute of Gene Biology, Russian Acedemy of Sciences, Moscow, Russia; Chemistry Department of Moscow State University, Moscow, Russia; Moscow Institute of Physics and Technology, Dolgoprudnyi, Russia; Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia; Research Institute of Physico-Chemical Medicine, Moscow, Russia; **Institute of Developmental Biology, Russian Academy of Sciences, Moscow, Russia; Institute of Biomedical Chemistry, Russian Academy of Medical Sciences, Moscow, Russia; and Assaf Harofeh Medical Center, Zerifin, Israel

View Article

Download full-text PDF

Source
http://www.fasebj.org/doi/10.1096/fj.14-259333
Publisher Site
http://dx.doi.org/10.1096/fj.14-259333DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4415016PMC
May 2015

Heavy-light chain interrelations of MS-associated immunoglobulins probed by deep sequencing and rational variation.

Mol Immunol 2014 Dec 16;62(2):305-14. Epub 2014 Feb 16.

Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia; Faculty of Chemistry, Lomonosov Moscow State University, Moscow, Russia; Institute of Gene Biology, Russian Academy of Sciences, Moscow, Russia. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.molimm.2014.01.013DOI Listing
December 2014

Genomic ancestry and somatic alterations correlate with age at diagnosis in Hispanic children with B-cell acute lymphoblastic leukemia.

Am J Hematol 2014 Jul 18;89(7):721-5. Epub 2014 Apr 18.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California, San Francisco, San Francisco, California, 94143; Program in Cancer Genetics, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California, 94143.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/ajh.23727DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4069235PMC
July 2014

Multiple sclerosis autoantigen myelin basic protein escapes control by ubiquitination during proteasomal degradation.

J Biol Chem 2014 Jun 16;289(25):17758-66. Epub 2014 Apr 16.

From the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117871 Moscow V-437, Russia, the Institute of Gene Biology, Russian Academy of Sciences, 117334 Moscow, Russia, the Department of Chemistry, Lomonosov Moscow State University, Moscow 119991, Russia, and

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M113.544247DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4067209PMC
June 2014

Recurrent epimutations activate gene body promoters in primary glioblastoma.

Genome Res 2014 May 7;24(5):761-74. Epub 2014 Apr 7.

Brain Tumor Research Center, Department of Neurosurgery, Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, California 94143, USA;

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.164707.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4009606PMC
May 2014

Targeting Wee1 for the treatment of pediatric high-grade gliomas.

Neuro Oncol 2014 Mar 4;16(3):352-60. Epub 2013 Dec 4.

Department of Neurology, University of California, San Francisco, San Francisco, California (S.M., I.K.); Department of Pediatrics, University of California, San Francisco, San Francisco, California (S.M., M.D.P., N.G.); Brain Tumor Research Center, University of California, San Francisco Helen Diller Family Comprehensive Cancer Center, San Francisco, California (S.M., R.H., X.Y., A.K.O., J.P., M.W.T., C.D.J., M.S.B., N.G., D.A.H.-K.); Department of Neurological Surgery, University of California, San Francisco, San Francisco, California (S.M., J.P., I.S., M.D.P., C.D.J., M.S.B., N.G., D.A.H.-K.); Department of Radiation Oncology, University of California, San Francisco, San Francisco, California (D.A.H.-K.).

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/neuonc/not220DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3922515PMC
March 2014

Increased microglia/macrophage gene expression in a subset of adult and pediatric astrocytomas.

PLoS One 2012 22;7(8):e43339. Epub 2012 Aug 22.

Department of Neurological Surgery, University of California San Francisco, San Francisco, California, United States of America.

View Article

Download full-text PDF

Source
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0043339PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3425586PMC
April 2013

Strategies for the selection of catalytic antibodies against organophosphorus nerve agents.

Chem Biol Interact 2013 Mar 2;203(1):196-201. Epub 2012 Nov 2.

MM Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.cbi.2012.10.011DOI Listing
March 2013

Antibody-antigen pair probed by combinatorial approach and rational design: bringing together structural insights, directed evolution, and novel functionality.

FEBS Lett 2012 Aug 25;586(18):2966-73. Epub 2012 Jul 25.

M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry RAS, Moscow, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.febslet.2012.07.046DOI Listing
August 2012

Fine mapping of chromosome 15q25.1 lung cancer susceptibility in African-Americans.

Hum Mol Genet 2010 Sep 29;19(18):3652-61. Epub 2010 Jun 29.

Division of Neuroepidemiology, Department of Neurological Surgery, University of California San Francisco, San Francisco, CA 94143, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/hmg/ddq268DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2928127PMC
September 2010

Strategies for induction of catalytic antibodies toward HIV-1 glycoprotein gp120 in autoimmune prone mice.

Mol Immunol 2009 Nov 6;47(1):87-95. Epub 2009 Feb 6.

Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Miklukho Maklaya 16/10, Moscow 119334, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.molimm.2008.12.020DOI Listing
November 2009

SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system.

Nucleic Acids Res 2009 Jan 4;37(Database issue):D803-9. Epub 2008 Nov 4.

Gladstone Institute of Cardiovascular Disease, 1650 Owens Street, San Francisco, CA 94158, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkn756DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686434PMC
January 2009

Pathway analysis of single-nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests.

Cancer Epidemiol Biomarkers Prev 2008 Jun;17(6):1368-73

Department of Epidemiology and Biostatistics, University of California, San Francisco, 44 Page Street, Suite 503, San Francisco, CA 94143-1215, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1055-9965.EPI-07-2830DOI Listing
June 2008

Anti-idiotypic antibody mimics proteolytic function of parent antigen.

Biochemistry 2007 Dec 20;46(50):14598-609. Epub 2007 Nov 20.

Shemyakin and Ovchinnikov Institute of Bioorganic Chemistry RAS, 16/10, Miklukho-Maklaya str, Moscow, 117997, Russia.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bi7013954DOI Listing
December 2007

Molecular signatures define two main classes of meningiomas.

Mol Cancer 2007 Oct 15;6:64. Epub 2007 Oct 15.

Brain Tumor Research Center, Department of Neurological Surgery, University of California, San Francisco, CA-94143, USA.

View Article

Download full-text PDF

Source
http://molecular-cancer.biomedcentral.com/articles/10.1186/1
Publisher Site
http://dx.doi.org/10.1186/1476-4598-6-64DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2173907PMC
October 2007

Electrostatics dominate quadruplex stability.

Biopolymers 2007 Jan;85(1):91-101

Department of Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco, CA 94143-0446, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/bip.20609DOI Listing
January 2007

Array comparative genomic hybridization identifies genetic subgroups in grade 4 human astrocytoma.

Clin Cancer Res 2005 Apr;11(8):2907-18

Brain Tumor Research Center, Department of Neurosurgery, University of California San Francisco, San Francisco, California, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/1078-0432.CCR-04-0708DOI Listing
April 2005

Integrated array-comparative genomic hybridization and expression array profiles identify clinically relevant molecular subtypes of glioblastoma.

Cancer Res 2005 Mar;65(5):1678-86

Department of Neurological Surgery (Brain Tumor Research Center), University of California, School of Medicine, San Francisco, California, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1158/0008-5472.CAN-04-2921DOI Listing
March 2005

A molecular switch underlies a human telomerase disease.

Proc Natl Acad Sci U S A 2002 Dec 13;99(26):16998-7003. Epub 2002 Dec 13.

Departments of Pharmaceutical Chemistry and Biochemistry and Biophysics, University of California, 513 Parnassus Avenue, San Francisco, CA 94143, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.262663599DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC139258PMC
December 2002

Pb EXAFS studies on DNA quadruplexes: identification of metal ion binding site.

Biochemistry 2002 Oct;41(40):12133-9

Department of Pharmaceutical Chemistry, School of Pharmacy, University of California, San Francisco, CA 94143-0446, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/bi020310pDOI Listing
October 2002