Ite A Laird-Offringa

Ite A Laird-Offringa

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Ite A Laird-Offringa

Ite A Laird-Offringa

Publications by authors named "Ite A Laird-Offringa"

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Tuberculosis infection and lung adenocarcinoma: Mendelian randomization and pathway analysis of genome-wide association study data from never-smoking Asian women.

Authors:
Jason Y Y Wong Han Zhang Chao A Hsiung Kouya Shiraishi Kai Yu Keitaro Matsuo Maria Pik Wong Yun-Chul Hong Jiucun Wang Wei Jie Seow Zhaoming Wang Minsun Song Hee Nam Kim I-Shou Chang Nilanjan Chatterjee Wei Hu Chen Wu Tetsuya Mitsudomi Wei Zheng Jin Hee Kim Adeline Seow Neil E Caporaso Min-Ho Shin Lap Ping Chung She-Juan An Ping Wang Yang Yang Hong Zheng Yasushi Yatabe Xu-Chao Zhang Young Tae Kim Qiuyin Cai Zhihua Yin Young-Chul Kim Bryan A Bassig Jiang Chang James Chung Man Ho Bu-Tian Ji Yataro Daigo Hidemi Ito Yukihide Momozawa Kyota Ashikawa Yoichiro Kamatani Takayuki Honda H Dean Hosgood Hiromi Sakamoto Hideo Kunitoh Koji Tsuta Shun-Ichi Watanabe Michiaki Kubo Yohei Miyagi Haruhiko Nakayama Shingo Matsumoto Masahiro Tsuboi Koichi Goto Jianxin Shi Lei Song Xing Hua Atsushi Takahashi Akiteru Goto Yoshihiro Minamiya Kimihiro Shimizu Kazumi Tanaka Fusheng Wei Fumihiko Matsuda Jian Su Yeul Hong Kim In-Jae Oh Fengju Song Wu-Chou Su Yu-Min Chen Gee-Chen Chang Kuan-Yu Chen Ming-Shyan Huang Li-Hsin Chien Yong-Bing Xiang Jae Yong Park Sun-Seog Kweon Chien-Jen Chen Kyoung-Mu Lee Batel Blechter Haixin Li Yu-Tang Gao Biyun Qian Daru Lu Jianjun Liu Hyo-Sung Jeon Chin-Fu Hsiao Jae Sook Sung Ying-Huang Tsai Yoo Jin Jung Huan Guo Zhibin Hu Wen-Chang Wang Charles C Chung Laurie Burdett Meredith Yeager Amy Hutchinson Sonja I Berndt Wei Wu Herbert Pang Yuqing Li Jin Eun Choi Kyong Hwa Park Sook Whan Sung Li Liu C H Kang Meng Zhu Chung-Hsing Chen Tsung-Ying Yang Jun Xu Peng Guan Wen Tan Chih-Liang Wang Michael Hsin Ko-Yung Sit James Ho Ying Chen Yi Young Choi Jen-Yu Hung Jun Suk Kim Ho Il Yoon Chien-Chung Lin In Kyu Park Ping Xu Yuzhuo Wang Qincheng He Reury-Perng Perng Chih-Yi Chen Roel Vermeulen Junjie Wu Wei-Yen Lim Kun-Chieh Chen Yao-Jen Li Jihua Li Hongyan Chen Chong-Jen Yu Li Jin Tzu-Yu Chen Shih-Sheng Jiang Jie Liu Taiki Yamaji Belynda Hicks Kathleen Wyatt Shengchao A Li Juncheng Dai Hongxia Ma Guangfu Jin Bao Song Zhehai Wang Sensen Cheng Xuelian Li Yangwu Ren Ping Cui Motoki Iwasaki Taichi Shimazu Shoichiro Tsugane Junjie Zhu Ying Chen Kaiyun Yang Gening Jiang Ke Fei Guoping Wu Hsien-Chin Lin Hui-Ling Chen Yao-Huei Fang Fang-Yu Tsai Wan-Shan Hsieh Jinming Yu Victoria L Stevens Ite A Laird-Offringa Crystal N Marconett Linda Rieswijk Ann Chao Pan-Chyr Yang Xiao-Ou Shu Tangchun Wu Y L Wu Dongxin Lin Kexin Chen Baosen Zhou Yun-Chao Huang Takashi Kohno Hongbing Shen Stephen J Chanock Nathaniel Rothman Qing Lan

Genomics 2019 Jul 12. Epub 2019 Jul 12.

Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.

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http://dx.doi.org/10.1016/j.ygeno.2019.07.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6954985PMC
July 2019

Association between GWAS-identified lung adenocarcinoma susceptibility loci and EGFR mutations in never-smoking Asian women, and comparison with findings from Western populations.

Authors:
Wei Jie Seow Keitaro Matsuo Chao Agnes Hsiung Kouya Shiraishi Minsun Song Hee Nam Kim Maria Pik Wong Yun-Chul Hong H Dean Hosgood Zhaoming Wang I-Shou Chang Jiu-Cun Wang Nilanjan Chatterjee Margaret Tucker Hu Wei Tetsuya Mitsudomi Wei Zheng Jin Hee Kim Baosen Zhou Neil E Caporaso Demetrius Albanes Min-Ho Shin Lap Ping Chung She-Juan An Ping Wang Hong Zheng Yasushi Yatabe Xu-Chao Zhang Young Tae Kim Xiao-Ou Shu Young-Chul Kim Bryan A Bassig Jiang Chang James Chung Man Ho Bu-Tian Ji Michiaki Kubo Yataro Daigo Hidemi Ito Yukihide Momozawa Kyota Ashikawa Yoichiro Kamatani Takayuki Honda Hiromi Sakamoto Hideo Kunitoh Koji Tsuta Shun-Ichi Watanabe Hiroshi Nokihara Yohei Miyagi Haruhiko Nakayama Shingo Matsumoto Masahiro Tsuboi Koichi Goto Zhihua Yin Jianxin Shi Atsushi Takahashi Akiteru Goto Yoshihiro Minamiya Kimihiro Shimizu Kazumi Tanaka Tangchun Wu Fusheng Wei Jason Y Y Wong Fumihiko Matsuda Jian Su Yeul Hong Kim In-Jae Oh Fengju Song Victor Ho Fun Lee Wu-Chou Su Yuh-Min Chen Gee-Chen Chang Kuan-Yu Chen Ming-Shyan Huang Pan-Chyr Yang Hsien-Chih Lin Yong-Bing Xiang Adeline Seow Jae Yong Park Sun-Seog Kweon Chien-Jen Chen Haixin Li Yu-Tang Gao Chen Wu Biyun Qian Daru Lu Jianjun Liu Hyo-Sung Jeon Chin-Fu Hsiao Jae Sook Sung Ying-Huang Tsai Yoo Jin Jung Huan Guo Zhibin Hu Wen-Chang Wang Charles C Chung Charles Lawrence Laurie Burdett Meredith Yeager Kevin B Jacobs Amy Hutchinson Sonja I Berndt Xingzhou He Wei Wu Junwen Wang Yuqing Li Jin Eun Choi Kyong Hwa Park Sook Whan Sung Li Liu Chang Hyun Kang Lingmin Hu Chung-Hsing Chen Tsung-Ying Yang Jun Xu Peng Guan Wen Tan Chih-Liang Wang Alan Dart Loon Sihoe Ying Chen Yi Young Choi Jen-Yu Hung Jun Suk Kim Ho-Il Yoon Qiuyin Cai Chien-Chung Lin In Kyu Park Ping Xu Jing Dong Christopher Kim Qincheng He Reury-Perng Perng Chih-Yi Chen Roel Vermeulen Junjie Wu Wei-Yen Lim Kun-Chieh Chen John K C Chan Minjie Chu Yao-Jen Li Jihua Li Hongyan Chen Chong-Jen Yu Li Jin Yen-Li Lo Ying-Hsiang Chen Joseph F Fraumeni Jie Liu Taiki Yamaji Yang Yang Belynda Hicks Kathleen Wyatt Shengchao A Li Juncheng Dai Hongxia Ma Guangfu Jin Bao Song Zhehai Wang Sensen Cheng Xuelian Li Yangwu Ren Ping Cui Motoki Iwasaki Taichi Shimazu Shoichiro Tsugane Junjie Zhu Gening Jiang Ke Fei Guoping Wu Li-Hsin Chien Hui-Ling Chen Yu-Chun Su Fang-Yu Tsai Yi-Song Chen Jinming Yu Victoria L Stevens Ite A Laird-Offringa Crystal N Marconett Dongxin Lin Kexin Chen Yi-Long Wu Maria Teresa Landi Hongbing Shen Nathaniel Rothman Takashi Kohno Stephen J Chanock Qing Lan

Hum Mol Genet 2017 01;26(2):454-465

Division of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, USA.

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http://dx.doi.org/10.1093/hmg/ddw414DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5856088PMC
January 2017

Pleiotropic Analysis of Lung Cancer and Blood Triglycerides.

J Natl Cancer Inst 2016 12 26;108(12). Epub 2016 Aug 26.

NORMENT, KG Jebsen Centre for Psychosis Research, Institute of Clinical Medicine (VZ, AW, FB, YW, OAA), and Prostate Cancer Research Group, Centre for Molecular Medicine Norway, Nordic EMBL Partnership (VZ, IGM), University of Oslo, Oslo, Norway; Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway (VZ, AW, FB, YW, OAA); European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK (VZ); Departments of Surgery and of Biochemistry and Molecular Biology (CNM, CY, IALO) and Will Rogers Institute Pulmonary Research Center and Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine (BZ, ZB), Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA (CNM, CY, IALO); Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, US Public Health Service, Bethesda, MD (JS, XH, LS, DA, NEC, NC, MTL); Information Management Services, Inc.; Rockville, MD (WW); Multimodal Imaging Laboratory (AMD, AJS), Center for Human Development (AMD, AJS), Department of Radiology (AMD), Department of Neurosciences (AMD), Department of Psychiatry (WKT), and Cognitive Sciences Graduate Program (AJS), University of California, San Diego, La Jolla, CA; Division of Epigenomics and Cancer Risk Factors, German Cancer Research Center (DKFZ), Heidelberg, Germany (ML, AR); Department of Molecular Biology, University of Salzburg, Salzburg, Austria (AR); Translational Lung Research Center Heidelberg TLRC-H, Member of the German Center for Lung Research DZL, Heidelberg, Germany (AR); Department of Medical Genetics (SD) and Department of Molecular Oncology, Institute of Cancer Research and Department of Urology (IGM), Oslo University Hospital, Oslo, Norway (SD); NORMENT, KG Jebsen Centre for Psychosis Research, Department of Clinical Science, University of Bergen, Bergen, Norway (SD); Radboud Unive

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http://dx.doi.org/10.1093/jnci/djw167DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5241892PMC
December 2016

Data on isoaspartylation of neuronal ELAVL proteins.

Data Brief 2016 Dec 17;9:1052-1055. Epub 2016 Nov 17.

Departments of Surgery and of Biochemistry and Molecular Medicine, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1016/j.dib.2016.11.034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5128017PMC
December 2016

Isoaspartylation appears to trigger small cell lung cancer-associated autoimmunity against neuronal protein ELAVL4.

J Neuroimmunol 2016 10 3;299:70-78. Epub 2016 Sep 3.

Departments of Surgery and of Biochemistry and Molecular Medicine, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA.

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http://dx.doi.org/10.1016/j.jneuroim.2016.09.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5152694PMC
October 2016

An Evolved RNA Recognition Motif That Suppresses HIV-1 Tat/TAR-Dependent Transcription.

ACS Chem Biol 2016 08 13;11(8):2206-15. Epub 2016 Jun 13.

Department of Surgery and Department of Biochemistry & Molecular Biology, USC/Norris Comprehensive Cancer Center, Keck School of Medicine , Los Angeles, California 90033, United States.

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http://dx.doi.org/10.1021/acschembio.6b00145DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5199234PMC
August 2016

The importance of detailed epigenomic profiling of different cell types within organs.

Epigenomics 2016 06 15;8(6):817-29. Epub 2016 Jun 15.

Department of Surgery, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA.

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http://dx.doi.org/10.2217/epi-2016-0005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5066118PMC
June 2016

Combinations of differentiation markers distinguish subpopulations of alveolar epithelial cells in adult lung.

Am J Physiol Lung Cell Mol Physiol 2016 Jan 6;310(2):L114-20. Epub 2015 Nov 6.

Division of Pulmonary, Critical Care and Sleep Medicine, Department of Medicine, Will Rogers Institute Pulmonary Research Center, Keck School of Medicine, University of Southern California, Los Angeles, California; Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California;

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http://dx.doi.org/10.1152/ajplung.00337.2015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4719049PMC
January 2016

Transcriptomic Profiling of Primary Alveolar Epithelial Cell Differentiation in Human and Rat.

Genom Data 2014 Dec;2:105-109

Department of Surgery, Keck School of Medicine, University of Southern California, Los Angeles, California, United States of America ; Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, California, United States of America ; Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California, United States of America.

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http://dx.doi.org/10.1016/j.gdata.2014.05.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203668PMC
December 2014

CDKN2A/p16 inactivation mechanisms and their relationship to smoke exposure and molecular features in non-small-cell lung cancer.

J Thorac Oncol 2013 Nov;8(11):1378-88

*Hamon Center for Therapeutic Oncology Research and †Division of Biostatistics, University of Texas Southwestern Medical Center, Dallas, Texas; ‡Department of Integrative Oncology, British Columbia Cancer Agency Research Centre, Vancouver, B.C., Canada; §Texas Scottish Rite Hospital for Children, Dallas, Texas; ‖Department of Surgery, Biochemistry, and Molecular Biology, Keck School of Medicine, USC/Norris Comprehensive Cancer Center, Los Angeles, California; ¶Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington; #Oncology Biomarker Development, Genentech Inc., South San Francisco, California; **Department of Molecular and Cell Biology, Center for Systems Biology, University of Texas at Dallas, Dallas, Texas; and ††Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas.

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http://dx.doi.org/10.1097/JTO.0b013e3182a46c0cDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3951422PMC
November 2013

The role of the C-terminal helix of U1A protein in the interaction with U1hpII RNA.

Nucleic Acids Res 2013 Aug 22;41(14):7092-100. Epub 2013 May 22.

Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, USA.

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http://dx.doi.org/10.1093/nar/gkt326DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737524PMC
August 2013

Analysis of protein-RNA complexes involving a RNA recognition motif engineered to bind hairpins with seven- and eight-nucleotide loops.

Biochemistry 2013 Jul 1;52(28):4745-7. Epub 2013 Jul 1.

Department of Chemistry and ‡Department of Biochemistry and Molecular Biology, Colorado State University , Fort Collins, Colorado 80523, United States.

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http://dx.doi.org/10.1021/bi400801qDOI Listing
July 2013

Epigenetic therapy in lung cancer.

Front Oncol 2013 30;3:135. Epub 2013 May 30.

Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California , Los Angeles, CA , USA.

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http://dx.doi.org/10.3389/fonc.2013.00135DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3667274PMC
June 2013

DNA binding by GATA transcription factor suggests mechanisms of DNA looping and long-range gene regulation.

Cell Rep 2012 Nov 8;2(5):1197-206. Epub 2012 Nov 8.

Molecular and Computational Biology Program, Departments of Biological Sciences and Chemistry, University of Southern California, Los Angeles, CA 90089, USA.

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http://dx.doi.org/10.1016/j.celrep.2012.10.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978094PMC
November 2012

Genome-scale analysis of DNA methylation in lung adenocarcinoma and integration with mRNA expression.

Genome Res 2012 Jul 21;22(7):1197-211. Epub 2012 May 21.

Department of Surgery, Department of Biochemistry and Molecular Biology, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1101/gr.132662.111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3396362PMC
July 2012

DNA methylation changes in atypical adenomatous hyperplasia, adenocarcinoma in situ, and lung adenocarcinoma.

PLoS One 2011 23;6(6):e21443. Epub 2011 Jun 23.

Department of Surgery, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0021443PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3121768PMC
November 2011

Small-cell lung cancer-associated autoantibodies: potential applications to cancer diagnosis, early detection, and therapy.

Mol Cancer 2011 Mar 30;10:33. Epub 2011 Mar 30.

Department of Surgery, Norris Cancer Center, Keck School of Medicine, University of Southern California, 1441 Eastlake Ave, NOR 6420, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1186/1476-4598-10-33DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3080347PMC
March 2011

HuR/methyl-HuR and AUF1 regulate the MAT expressed during liver proliferation, differentiation, and carcinogenesis.

Gastroenterology 2010 May 25;138(5):1943-53. Epub 2010 Jan 25.

Centro de Investigación Cooperativa en Biociencias (CIC bioGUNE), Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas, Technology Park of Bizkaia, Bizkaia, Spain.

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http://dx.doi.org/10.1053/j.gastro.2010.01.032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2860011PMC
May 2010

Immune response in lung cancer mouse model mimics human anti-Hu reactivity.

J Neuroimmunol 2009 Dec 17;217(1-2):38-45. Epub 2009 Sep 17.

Departments of Surgery and of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California/Norris Cancer Center, 1441 Eastlake Ave. NOR 6420, Norris Cancer Center, Los Angeles, CA 90089, United States.

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http://dx.doi.org/10.1016/j.jneuroim.2009.08.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2788043PMC
December 2009

Low level anti-Hu reactivity: A risk marker for small cell lung cancer?

Cancer Detect Prev 2009 12;32(4):292-9. Epub 2008 Dec 12.

Department of Biochemistry and Molecular Biology, Norris Comprehensive Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1016/j.cdp.2008.06.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2952929PMC
April 2009

DNA methylation-based biomarkers for early detection of non-small cell lung cancer: an update.

Mol Cancer 2008 Oct 23;7:81. Epub 2008 Oct 23.

Departments of Surgery and of Biochemistry and Molecular Biology, Keck School of Medicine, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://molecular-cancer.biomedcentral.com/articles/10.1186/1
Publisher Site
http://dx.doi.org/10.1186/1476-4598-7-81DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2585582PMC
October 2008

Conformationally restricted nucleotides as a probe of structure-function relationships in RNA.

RNA 2008 Aug 2;14(8):1632-43. Epub 2008 Jul 2.

Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824, USA.

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http://dx.doi.org/10.1261/rna.866408DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2491483PMC
August 2008

Identification of a panel of sensitive and specific DNA methylation markers for squamous cell lung cancer.

Mol Cancer 2008 Jul 10;7:62. Epub 2008 Jul 10.

Department of Surgery, Norris Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles, CA, 90089-9176, USA.

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http://dx.doi.org/10.1186/1476-4598-7-62DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2483990PMC
July 2008

DNA methylation profile of 28 potential marker loci in malignant mesothelioma.

Lung Cancer 2007 Nov 30;58(2):220-30. Epub 2007 Jul 30.

Norris Cancer Center and Department of Surgery, Keck School of Medicine, University of Southern California, Room NOR6420, 1441 Eastlake Avenue, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1016/j.lungcan.2007.06.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2752414PMC
November 2007

Identification of a panel of sensitive and specific DNA methylation markers for lung adenocarcinoma.

Mol Cancer 2007 Oct 29;6:70. Epub 2007 Oct 29.

Norris Cancer Center and Department of Surgery and of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1186/1476-4598-6-70DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2206053PMC
October 2007

The role of DNA methylation in the development and progression of lung adenocarcinoma.

Dis Markers 2007 ;23(1-2):5-30

Department of Pathology, Aberdeen Royal Infirmary, Link Building, Foresterhill, Aberdeen, AB25 2ZN, UK.

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http://downloads.hindawi.com/journals/dm/2007/985474.pdf
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3851711PMC
http://dx.doi.org/10.1155/2007/985474DOI Listing
May 2007

The role of RNA structure in the interaction of U1A protein with U1 hairpin II RNA.

RNA 2006 Jul 31;12(7):1168-78. Epub 2006 May 31.

Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1261/rna.75206DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1484440PMC
July 2006

The role of positively charged amino acids and electrostatic interactions in the complex of U1A protein and U1 hairpin II RNA.

Nucleic Acids Res 2006 10;34(1):275-85. Epub 2006 Jan 10.

Department of Biochemistry and Molecular Biology, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1093/nar/gkj436DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1326249PMC
January 2006

Kinetic analysis of the role of the tyrosine 13, phenylalanine 56 and glutamine 54 network in the U1A/U1 hairpin II interaction.

Nucleic Acids Res 2005 24;33(9):2917-28. Epub 2005 May 24.

Department of Biochemistry and Molecular Biology, University of Southern California Los Angeles, CA 90089-9176, USA.

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http://dx.doi.org/10.1093/nar/gki602DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1140079PMC
June 2005

Distinct DNA methylation profiles in malignant mesothelioma, lung adenocarcinoma, and non-tumor lung.

Lung Cancer 2005 Feb;47(2):193-204

Norris Cancer Center and Department of Surgery and Biochemistry, Room NOR 6420, 1441 Eastlake Ave., Keck School of Medicine, University of Southern California, Los Angeles, CA 90089-9176, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S016950020400447
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http://dx.doi.org/10.1016/j.lungcan.2004.08.003DOI Listing
February 2005

A comparison of cluster analysis methods using DNA methylation data.

Bioinformatics 2004 Aug 25;20(12):1896-904. Epub 2004 Mar 25.

Department of Preventive Medicine, Norris Cancer Center, Keck School of Medicine, University of Southern California, Los Angeles 90089, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/bth176DOI Listing
August 2004

Solution structure of the complex formed by the two N-terminal RNA-binding domains of nucleolin and a pre-rRNA target.

J Mol Biol 2004 Apr;337(4):799-816

Department of Chemistry and Biochemistry, Molecular Biology Institute, University of California, Los Angeles, CA 90095-1569, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S002228360400138
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http://dx.doi.org/10.1016/j.jmb.2004.01.056DOI Listing
April 2004

Characterization of the interaction between neuronal RNA-binding protein HuD and AU-rich RNA.

J Biol Chem 2003 Oct 4;278(41):39801-8. Epub 2003 Aug 4.

Department of Biochemistry and Molecular Biology, Keck School of Medicine, University of Southern California/Norris Comprehensive Cancer Center, Los Angeles, California 90089-9176, USA.

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http://dx.doi.org/10.1074/jbc.M307105200DOI Listing
October 2003

Lipopolysaccharide-induced methylation of HuR, an mRNA-stabilizing protein, by CARM1. Coactivator-associated arginine methyltransferase.

J Biol Chem 2002 Nov 16;277(47):44623-30. Epub 2002 Sep 16.

Department of Pathology, University of Southern California, Keck School of Medicine, Los Angeles, California 90089-9176, USA.

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http://dx.doi.org/10.1074/jbc.M206187200DOI Listing
November 2002

Complex role of the beta 2-beta 3 loop in the interaction of U1A with U1 hairpin II RNA.

J Biol Chem 2002 Sep 24;277(36):33267-74. Epub 2002 Jun 24.

Norris Cancer Center/University of Southern California, Keck School of Medicine, Los Angeles, California 90089-9176, USA.

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http://dx.doi.org/10.1074/jbc.M200304200DOI Listing
September 2002

DNA methylation analysis: a powerful new tool for lung cancer diagnosis.

Oncogene 2002 Aug;21(35):5450-61

Department of Biochemistry, University of Southern California, School of Medicine, Norris Comprehensive Cancer Center, NOR 6420, 1441 Eastlake Ave, Los Angeles, California, CA 90089-9176, USA.

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http://dx.doi.org/10.1038/sj.onc.1205605DOI Listing
August 2002

Hierarchical clustering of lung cancer cell lines using DNA methylation markers.

Cancer Epidemiol Biomarkers Prev 2002 Mar;11(3):291-7

Hamon Center for Therapeutic Oncology Research and Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas 75390-9593, USA.

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March 2002

Kinetic studies of RNA-protein interactions using surface plasmon resonance.

Methods 2002 Feb;26(2):95-104

Keck School of Medicine, University of Southern California/Norris Cancer Center, MC#9176, Room NOR6420, 1441 Eastlake Avenue, Los Angeles 90089-9176, USA.

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http://dx.doi.org/10.1016/S1046-2023(02)00012-9DOI Listing
February 2002