Publications by authors named "Irina Balaur"

10Publications

cd2sbgnml: bidirectional conversion between CellDesigner and SBGN formats.

Bioinformatics 2020 04;36(8):2620-2622

Institut National de la Santé et de la Recherche Médicale (INSERM), U900, F-75005 Paris, France.

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http://dx.doi.org/10.1093/bioinformatics/btz969DOI Listing
April 2020

Human-like layout algorithms for signalling hypergraphs: outlining requirements.

Brief Bioinform 2018 Oct 5. Epub 2018 Oct 5.

European Institute for Systems Biology and Medicine, CIRI UMR5308, CNRS-ENS-UCBL-INSERM, Université de Lyon,50 Avenue Tony Garnier, Lyon, France.

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https://academic.oup.com/bib/advance-article/doi/10.1093/bib
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http://dx.doi.org/10.1093/bib/bby099DOI Listing
October 2018

Recon2Neo4j: applying graph database technologies for managing comprehensive genome-scale networks.

Bioinformatics 2017 04;33(7):1096-1098

European Institute for Systems Biology and Medicine (EISBM), CIRI CNRS UMR 5308, CNRS-ENS-UCBL-INSERM, Lyon, France.

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http://dx.doi.org/10.1093/bioinformatics/btw731DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5408918PMC
April 2017

STON: exploring biological pathways using the SBGN standard and graph databases.

BMC Bioinformatics 2016 Dec 5;17(1):494. Epub 2016 Dec 5.

European Institute for Systems Biology and Medicine (EISBM), CIRI UMR 5308, CNRS-ENS-UCBL-INSERM, Université de Lyon, 50 Avenue Tony Garnier, Lyon, 69007, France.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/s12859-016-1394-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5139139PMC
December 2016

EpiGeNet: A Graph Database of Interdependencies Between Genetic and Epigenetic Events in Colorectal Cancer.

J Comput Biol 2017 Oct 14;24(10):969-980. Epub 2016 Sep 14.

1 European Institute for Systems Biology and Medicine (EISBM) , CIRI UMR CNRS 5308, CNRS-ENS-UCBL-INSERM, Université Claude Bernard, Lyon, France .

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http://dx.doi.org/10.1089/cmb.2016.0095DOI Listing
October 2017