Ira W Deveson

Ira W Deveson

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Ira W Deveson

Ira W Deveson

Publications by authors named "Ira W Deveson"

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Use of synthetic DNA spike-in controls (sequins) for human genome sequencing.

Nat Protoc 2019 Jul 19;14(7):2119-2151. Epub 2019 Jun 19.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, Australia.

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http://dx.doi.org/10.1038/s41596-019-0175-1DOI Listing
July 2019

Diagnosis of fusion genes using targeted RNA sequencing.

Nat Commun 2019 03 27;10(1):1388. Epub 2019 Mar 27.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, 2010, NSW, Australia.

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http://dx.doi.org/10.1038/s41467-019-09374-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6437215PMC
March 2019

Universal Alternative Splicing of Noncoding Exons.

Cell Syst 2018 Feb 24;6(2):245-255.e5. Epub 2018 Jan 24.

Garvan Institute of Medical Research, Sydney, NSW, Australia; St Vincent's Clinical School, University of New South Wales, Sydney, NSW, Australia; Altius Institute for Biomedical Sciences, Seattle, WA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cels.2017.12.005DOI Listing
February 2018

Reference standards for next-generation sequencing.

Nat Rev Genet 2017 08 19;18(8):473-484. Epub 2017 Jun 19.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia.

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http://dx.doi.org/10.1038/nrg.2017.44DOI Listing
August 2017

The Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome.

Trends Genet 2017 07 20;33(7):464-478. Epub 2017 May 20.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW, Australia; School of Biotechnology and Biomolecular Sciences, Faculty of Science, University of New South Wales, Sydney, NSW, Australia; St Vincent's Clinical School, University of New South Wales, Sydney, NSW, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.tig.2017.04.004DOI Listing
July 2017

ANAQUIN: a software toolkit for the analysis of spike-in controls for next generation sequencing.

Bioinformatics 2017 Jun;33(11):1723-1724

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, NSW, Australia.

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http://dx.doi.org/10.1093/bioinformatics/btx038DOI Listing
June 2017

Differential intron retention in chromatin modifier genes is implicated in reptile temperature-dependent sex determination.

Sci Adv 2017 06 14;3(6):e1700731. Epub 2017 Jun 14.

Institute for Applied Ecology, University of Canberra, Canberra, Australian Capital Territory, Australia.

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http://dx.doi.org/10.1126/sciadv.1700731DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5470834PMC
June 2017

Representing genetic variation with synthetic DNA standards.

Nat Methods 2016 09 8;13(9):784-91. Epub 2016 Aug 8.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, New South Wales, Australia.

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http://dx.doi.org/10.1038/nmeth.3957DOI Listing
September 2016

Spliced synthetic genes as internal controls in RNA sequencing experiments.

Nat Methods 2016 09 8;13(9):792-8. Epub 2016 Aug 8.

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, New South Wales, Australia.

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http://dx.doi.org/10.1038/nmeth.3958DOI Listing
September 2016