Dr. Ingrid M Keseler, MS, PhD - SRI International

Dr. Ingrid M Keseler

MS, PhD

SRI International

Menlo Park, CA | United States

Dr. Ingrid M Keseler, MS, PhD - SRI International

Dr. Ingrid M Keseler

MS, PhD

Introduction

Primary Affiliation: SRI International - Menlo Park, CA , United States

Publications

15Publications

441Reads

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1813PubMed Central Citations

Curation accuracy of model organism databases.

Database (Oxford) 2014 12;2014. Epub 2014 Jun 12.

Bioinformatics Research Group, Artificial Intelligence Center, SRI International, CA, USA, Department of Genetics, Stanford University, CA 94305, USA, Department of Bacteriology, University of Wisconsin, WI 53706-1521, USA, Department of Cellular and Molecular Pharmacology, University of California at San Francisco, CA 94158-2140, USA, DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, WI 53726, USA and Department of Medical Microbiology and Immunology, University of Wisconsin, WI 53706-1521, USA

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http://dx.doi.org/10.1093/database/bau058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4207230PMC
August 2014
47 Reads
9 Citations
3.372 Impact Factor

Dead end metabolites--defining the known unknowns of the E. coli metabolic network.

PLoS One 2013 23;8(9):e75210. Epub 2013 Sep 23.

Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, New South Wales, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0075210PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3781023PMC
July 2014
4 Reads
5 Citations
3.234 Impact Factor

A genome-scale metabolic flux model of Escherichia coli K-12 derived from the EcoCyc database.

BMC Syst Biol 2014 Jun 30;8:79. Epub 2014 Jun 30.

Bioinformatics Research Group, SRI International, 333 Ravenswood Ave,, 94025 Menlo Park, CA, USA.

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http://dx.doi.org/10.1186/1752-0509-8-79DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4086706PMC
June 2014
15 Reads
9 Citations
2.440 Impact Factor

Addition of Escherichia coli K-12 growth observation and gene essentiality data to the EcoCyc database.

J Bacteriol 2014 Mar 20;196(5):982-8. Epub 2013 Dec 20.

Department of Chemistry and Biomolecular Science, Macquarie University, Sydney, Australia.

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http://dx.doi.org/10.1128/JB.01209-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3957686PMC
March 2014
9 Reads
5 Citations
2.810 Impact Factor

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases.

Nucleic Acids Res 2014 Jan 12;42(Database issue):D459-71. Epub 2013 Nov 12.

SRI International, 333 Ravenswood, Menlo Park, CA 94025, USA, Carnegie Institution, Department of Plant Biology, 260 Panama Street, Stanford, CA 94305, USA and Boyce Thompson Institute for Plant Research, Tower Road, Ithaca, New York 14853 USA.

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http://dx.doi.org/10.1093/nar/gkt1103DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964957PMC
January 2014
52 Reads
316 Citations
9.112 Impact Factor

Computing minimal nutrient sets from metabolic networks via linear constraint solving.

BMC Bioinformatics 2013 Mar 27;14:114. Epub 2013 Mar 27.

Computer Science Laboratory, SRI International, Menlo Park, CA 94025, USA.

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http://dx.doi.org/10.1186/1471-2105-14-114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3644277PMC
March 2013
23 Reads
2 Citations
2.580 Impact Factor

Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology.

Brief Bioinform 2010 Jan 2;11(1):40-79. Epub 2009 Dec 2.

Artificial Intelligence Center, SRI International, 333 Ravenswood Ave, AE206, Menlo Park, CA 94025, USA.

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http://dx.doi.org/10.1093/bib/bbp043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2810111PMC
January 2010
43 Reads
187 Citations
9.620 Impact Factor

What we can learn about Escherichia coli through application of Gene Ontology.

Trends Microbiol 2009 Jul 1;17(7):269-78. Epub 2009 Jul 1.

Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843-2128, USA.

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http://dx.doi.org/10.1016/j.tim.2009.04.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575750PMC
July 2009
17 Reads
10 Citations
9.190 Impact Factor

EcoCyc: a comprehensive database resource for Escherichia coli.

Nucleic Acids Res 2005 Jan;33(Database issue):D334-7

SRI International, 333 Ravenswood Avenue, Menlo Park, CA 94025, USA.

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http://dx.doi.org/10.1093/nar/gki108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC540062PMC
January 2005
8 Reads
210 Citations
9.112 Impact Factor