Publications by authors named "Igor V Sharakhov"

65Publications

Reorganization of the nuclear architecture in the Lamin B mutant lacking the CaaX box.

Authors:
Semen M Bondarenko Igor V Sharakhov

Nucleus 2020 12;11(1):283-298

Department of Entomology, Virginia Polytechnic Institute and State University , Blacksburg, Virginia, USA.

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December 2020

Genus-Wide Characterization of Bumblebee Genomes Provides Insights into Their Evolution and Variation in Ecological and Behavioral Traits.

Authors:
Cheng Sun Jiaxing Huang Yun Wang Xiaomeng Zhao Long Su Gregg W C Thomas Mengya Zhao Xingtan Zhang Irwin Jungreis Manolis Kellis Saverio Vicario Igor V Sharakhov Semen M Bondarenko Martin Hasselmann Chang N Kim Benedict Paten Luca Penso-Dolfin Li Wang Yuxiao Chang Qiang Gao Ling Ma Lina Ma Zhang Zhang Hongbo Zhang Huahao Zhang Livio Ruzzante Hugh M Robertson Yihui Zhu Yanjie Liu Huipeng Yang Lele Ding Quangui Wang Dongna Ma Weilin Xu Cheng Liang Michael W Itgen Lauren Mee Gang Cao Ze Zhang Ben M Sadd Matthew W Hahn Sarah Schaack Seth M Barribeau Paul H Williams Robert M Waterhouse Rachel Lockridge Mueller

Mol Biol Evol 2021 Jan;38(2):486-501

Department of Biology, Colorado State University, Fort Collins, CO.

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January 2021

The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere.

Authors:
Austin Compton Jiangtao Liang Chujia Chen Varvara Lukyanchikova Yumin Qi Mark Potters Robert Settlage Dustin Miller Stéphane Deschamps Chunhong Mao Victor Llaca Igor V Sharakhov Zhijian Tu

G3 (Bethesda) 2020 Oct 5;10(10):3811-3819. Epub 2020 Oct 5.

Department of Biochemistry, Virginia Tech, Blacksburg, VA24061

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October 2020

Recent advances and future perspectives in vector-omics.

Authors:
Austin Compton Igor V Sharakhov Zhijian Tu

Curr Opin Insect Sci 2020 08 29;40:94-103. Epub 2020 May 29.

Department of Biochemistry, Virginia Tech, Blacksburg, VA 24061, United States; Department of Entomology, Virginia Tech, Blacksburg, VA 24061, United States; The Interdisciplinary PhD Program in Genetics, Bioinformatics, and Computational Biology, Virginia Tech, Blacksburg, VA 24061, United States. Electronic address:

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August 2020

Conserved Small Nucleotidic Elements at the Origin of Concerted piRNA Biogenesis from Genes and lncRNAs.

Authors:
Silke Jensen Emilie Brasset Elise Parey Hugues Roest Crollius Igor V Sharakhov Chantal Vaury

Cells 2020 06 18;9(6). Epub 2020 Jun 18.

GReD, Université Clermont Auvergne, CNRS, INSERM, Faculté de Médecine, 63000 Clermont-Ferrand, France.

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June 2020

Structural Variation of the X Chromosome Heterochromatin in the Complex.

Authors:
Atashi Sharma Nicholas A Kinney Vladimir A Timoshevskiy Maria V Sharakhova Igor V Sharakhov

Genes (Basel) 2020 03 19;11(3). Epub 2020 Mar 19.

Department of Entomology, Virginia Polytechnic and State University, Blacksburg, VA 24061, USA.

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March 2020

Chromosome and Genome Divergence between the Cryptic Eurasian Malaria Vector-Species and .

Authors:
Anastasia N Naumenko Dmitriy A Karagodin Andrey A Yurchenko Anton V Moskaev Olga I Martin Elina M Baricheva Igor V Sharakhov Mikhail I Gordeev Maria V Sharakhova

Genes (Basel) 2020 02 5;11(2). Epub 2020 Feb 5.

Department of Entomology and the Fralin Life Science Institute, Virginia Polytechnic and State University, 360 West Campus Drive, Blacksburg, VA 24061, USA.

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February 2020

Three-dimensional Organization of Polytene Chromosomes in Somatic and Germline Tissues of Malaria Mosquitoes.

Authors:
Phillip George Nicholas A Kinney Jiangtao Liang Alexey V Onufriev Igor V Sharakhov

Cells 2020 Feb 1;9(2). Epub 2020 Feb 1.

Department of Entomology, Virginia Tech, Blacksburg, VA 24061, USA.

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February 2020

Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies.

Authors:
Robert M Waterhouse Sergey Aganezov Yoann Anselmetti Jiyoung Lee Livio Ruzzante Maarten J M F Reijnders Romain Feron Sèverine Bérard Phillip George Matthew W Hahn Paul I Howell Maryam Kamali Sergey Koren Daniel Lawson Gareth Maslen Ashley Peery Adam M Phillippy Maria V Sharakhova Eric Tannier Maria F Unger Simo V Zhang Max A Alekseyev Nora J Besansky Cedric Chauve Scott J Emrich Igor V Sharakhov

BMC Biol 2020 01 2;18(1). Epub 2020 Jan 2.

The Interdisciplinary PhD Program in Genetics, Bioinformatics, and Computational Biology, Virginia Polytechnic Institute and State University, Blacksburg, VA, 24061, USA.

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January 2020

Correction to: De novo profiling of RNA viruses in Anopheles malaria vector mosquitoes from forest ecological zones in Senegal and Cambodia.

Authors:
Eugeni Belda Ferdinand Nanfack-Minkeu Karin Eiglmeier Guillaume Carissimo Inge Holm Mawlouth Diallo Diawo Diallo Amélie Vantaux Saorin Kim Igor V Sharakhov Kenneth D Vernick

BMC Genomics 2019 09 5;20(1):698. Epub 2019 Sep 5.

Unit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.

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September 2019

De novo profiling of RNA viruses in Anopheles malaria vector mosquitoes from forest ecological zones in Senegal and Cambodia.

Authors:
Eugeni Belda Ferdinand Nanfack-Minkeu Karin Eiglmeier Guillaume Carissimo Inge Holm Mawlouth Diallo Diawo Diallo Amélie Vantaux Saorin Kim Igor V Sharakhov Kenneth D Vernick

BMC Genomics 2019 Aug 20;20(1):664. Epub 2019 Aug 20.

Unit of Insect Vector Genetics and Genomics, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.

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August 2019

Premeiotic and meiotic failures lead to hybrid male sterility in the Anopheles gambiae complex.

Authors:
Jiangtao Liang Igor V Sharakhov

Proc Biol Sci 2019 07 10;286(1906):20191080. Epub 2019 Jul 10.

1 Department of Entomology, Virginia Polytechnic Institute and State University , Blacksburg, VA , USA.

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July 2019

Improved reference genome of Aedes aegypti informs arbovirus vector control.

Authors:
Benjamin J Matthews Olga Dudchenko Sarah B Kingan Sergey Koren Igor Antoshechkin Jacob E Crawford William J Glassford Margaret Herre Seth N Redmond Noah H Rose Gareth D Weedall Yang Wu Sanjit S Batra Carlos A Brito-Sierra Steven D Buckingham Corey L Campbell Saki Chan Eric Cox Benjamin R Evans Thanyalak Fansiri Igor Filipović Albin Fontaine Andrea Gloria-Soria Richard Hall Vinita S Joardar Andrew K Jones Raissa G G Kay Vamsi K Kodali Joyce Lee Gareth J Lycett Sara N Mitchell Jill Muehling Michael R Murphy Arina D Omer Frederick A Partridge Paul Peluso Aviva Presser Aiden Vidya Ramasamy Gordana Rašić Sourav Roy Karla Saavedra-Rodriguez Shruti Sharan Atashi Sharma Melissa Laird Smith Joe Turner Allison M Weakley Zhilei Zhao Omar S Akbari William C Black Han Cao Alistair C Darby Catherine A Hill J Spencer Johnston Terence D Murphy Alexander S Raikhel David B Sattelle Igor V Sharakhov Bradley J White Li Zhao Erez Lieberman Aiden Richard S Mann Louis Lambrechts Jeffrey R Powell Maria V Sharakhova Zhijian Tu Hugh M Robertson Carolyn S McBride Alex R Hastie Jonas Korlach Daniel E Neafsey Adam M Phillippy Leslie B Vosshall

Nature 2018 11 14;563(7732):501-507. Epub 2018 Nov 14.

Laboratory of Neurogenetics and Behavior, The Rockefeller University, New York, NY, USA.

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November 2018

Physical Genome Mapping Using Fluorescence In Situ Hybridization with Mosquito Chromosomes.

Authors:
Maria V Sharakhova Gleb N Artemov Vladimir A Timoshevskiy Igor V Sharakhov

Methods Mol Biol 2019 ;1858:177-194

Department of Entomology and Fralin Life Science Institute, Virginia Tech, Blacksburg, VA, USA.

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July 2019

The Development of Cytogenetic Maps for Malaria Mosquitoes.

Authors:
Gleb N Artemov Vladimir N Stegniy Maria V Sharakhova Igor V Sharakhov

Insects 2018 Sep 17;9(3). Epub 2018 Sep 17.

Laboratory of Ecology, Genetics and Environmental Protection, Tomsk State University, 36 Lenin Avenue, 634050 Tomsk, Russia.

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September 2018

A standard photomap of the ovarian nurse cell chromosomes for the dominant malaria vector in Europe and Middle East Anopheles sacharovi.

Authors:
Gleb N Artemov Alena I Velichevskaya Semen M Bondarenko Gayane H Karagyan Sargis A Aghayan Marine S Arakelyan Vladimir N Stegniy Igor V Sharakhov Maria V Sharakhova

Malar J 2018 Jul 30;17(1):276. Epub 2018 Jul 30.

Laboratory of Ecology, Genetics and Environment Protection, Tomsk State University, Tomsk, Russia.

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July 2018

Partial-arm translocations in evolution of malaria mosquitoes revealed by high-coverage physical mapping of the Anopheles atroparvus genome.

Authors:
Gleb N Artemov Semen M Bondarenko Anastasia N Naumenko Vladimir N Stegniy Maria V Sharakhova Igor V Sharakhov

BMC Genomics 2018 Apr 23;19(1):278. Epub 2018 Apr 23.

Laboratory of Ecology, Genetics and Environmental Protection, Tomsk State University, 36 Lenin Avenue, Tomsk, 634050, Russia.

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April 2018

A standard photomap of ovarian nurse cell chromosomes and inversion polymorphism in Anopheles beklemishevi.

Authors:
Gleb N Artemov Mikhail I Gordeev Alina A Kokhanenko Anton V Moskaev Alena I Velichevskaya Vladimir N Stegniy Igor V Sharakhov Maria V Sharakhova

Parasit Vectors 2018 03 27;11(1):211. Epub 2018 Mar 27.

Laboratory of Ecology, Genetics and Environmental Protection, Tomsk State University, Tomsk, Russia.

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March 2018

Chromosome-nuclear envelope attachments affect interphase chromosome territories and entanglement.

Authors:
Nicholas Allen Kinney Igor V Sharakhov Alexey V Onufriev

Epigenetics Chromatin 2018 01 22;11(1). Epub 2018 Jan 22.

Genomics Bioinformatics and Computational Biology, Virginia Tech, Blacksburg, VA, 24061, USA.

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January 2018

Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation.

Authors:
Jason R Miller Sergey Koren Kari A Dilley Vinita Puri David M Brown Derek M Harkins Françoise Thibaud-Nissen Benjamin Rosen Xiao-Guang Chen Zhijian Tu Igor V Sharakhov Maria V Sharakhova Robert Sebra Timothy B Stockwell Nicholas H Bergman Granger G Sutton Adam M Phillippy Peter M Piermarini Reed S Shabman

Gigascience 2018 03;7(3):1-13

J. Craig Venter Institute, 9714 Medical Center Drive, Rockville, MD 20850, USA.

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March 2018