Ie-Ming Shih

Ie-Ming Shih

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Ie-Ming Shih

Ie-Ming Shih

Publications by authors named "Ie-Ming Shih"

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100Publications

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Oncogenic BRAF and KRAS mutations in endosalpingiosis.

J Pathol 2019 Oct 1. Epub 2019 Oct 1.

Department of Pathology & Obstetrics, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1002/path.5353DOI Listing
October 2019

The Origin and Pathogenesis of Endometriosis.

Annu Rev Pathol 2019 09 3. Epub 2019 Sep 3.

Pathobiology Graduate Program, Johns Hopkins University School of Medicine, Baltimore, Maryland 21231, USA; email:

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http://dx.doi.org/10.1146/annurev-pathmechdis-012419-032654DOI Listing
September 2019

Spleen tyrosine kinase activity regulates epidermal growth factor receptor signaling pathway in ovarian cancer.

EBioMedicine 2019 Sep 3;47:184-194. Epub 2019 Sep 3.

Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins Medical Institutions, Baltimore, MD 21231, United States of America; Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD 21287, United States of America. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2019.08.055DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6796592PMC
September 2019

Genomic landscape and evolutionary trajectories of ovarian cancer precursor lesions.

J Pathol 2019 May 15;248(1):41-50. Epub 2019 Feb 15.

Departments of Pathology and Gynecology/Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://dx.doi.org/10.1002/path.5219DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6618168PMC
May 2019

T cell-inflamed phenotype and increased Foxp3 expression in infiltrating T-cells of mismatch-repair deficient endometrial cancers.

Mod Pathol 2019 04 6;32(4):576-584. Epub 2018 Nov 6.

Department of Oncology, Sidney Kimmel Cancer Center, Johns Hopkins School of Medicine, Baltimore, MD, USA.

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http://dx.doi.org/10.1038/s41379-018-0172-xDOI Listing
April 2019

Proteome-wide Tyrosine Phosphorylation Analysis Reveals Dysregulated Signaling Pathways in Ovarian Tumors.

Mol Cell Proteomics 2019 03 6;18(3):448-460. Epub 2018 Dec 6.

From the ‡Department of Pharmacology & Molecular Sciences, Johns Hopkins School of Medicine, Baltimore, Maryland 21205;

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http://dx.doi.org/10.1074/mcp.RA118.000851DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6398206PMC
March 2019

Long Interspersed Nuclear Element 1 Retrotransposons Become Deregulated during the Development of Ovarian Cancer Precursor Lesions.

Am J Pathol 2019 03 13;189(3):513-520. Epub 2018 Dec 13.

Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Baltimore, Maryland; Department of Pathology, Sidney Kimmel Comprehensive Cancer Center, Baltimore, Maryland; Department of Gynecology and Obstetrics, Sidney Kimmel Comprehensive Cancer Center, Baltimore, Maryland. Electronic address:

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http://dx.doi.org/10.1016/j.ajpath.2018.11.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6412403PMC
March 2019

Follicular fluid has more to offer: Insulin-like growth factor axis on ovarian carcinogenesis.

EBioMedicine 2019 Mar 21;41:30-31. Epub 2019 Feb 21.

Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD 21209, United States of America. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2019.02.030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6442987PMC
March 2019

Cytomorphologic and molecular analyses of fallopian tube fimbrial brushings for diagnosis of serous tubal intraepithelial carcinoma.

Cancer Cytopathol 2019 Mar 12;127(3):192-201. Epub 2019 Mar 12.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, Maryland.

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http://dx.doi.org/10.1002/cncy.22110DOI Listing
March 2019

Molecular Classification and Emerging Targeted Therapy in Endometrial Cancer.

Int J Gynecol Pathol 2019 Feb 7. Epub 2019 Feb 7.

TeLinde Gynecologic Pathology Research Program, Department of Gynecology and Obstetrics (T.T.Y., T.L.W., I.M.S., S.G.) Kelly Gynecologic Oncology Service, Department of Gynecology and Obstetrics (T.T.Y., A.N.F., S.G.) Department of Pathology (T.L.W.) Department of Oncology (S.G.), Johns Hopkins University School of Medicine, Baltimore, Maryland.

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http://dx.doi.org/10.1097/PGP.0000000000000585DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6685771PMC
February 2019

International Society of Gynecological Pathologists (ISGyP) Endometrial Cancer Project: Guidelines From the Special Techniques and Ancillary Studies Group.

Int J Gynecol Pathol 2019 Jan;38 Suppl 1:S114-S122

MD Anderson Cancer Center, Houston, Texas (R.B., A.Y., A.M.) University of Michigan Medical School, Ann Arbor, Michigan (K.R.C.) Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania (K.C.) Bergonie Institute, Bordeaux, France (S.C.) The Ottawa Hospital, University of Ottawa, Ottawa (B.D.) Toronto General Hospital, Toronto (P.S., B.C.), Ontario Department of Pathology, University of Calgary, Calgary, Alberta (M.K.), Canada Edinburgh Cancer Research Centre, Edinburgh (S.H.) Belfast Health and Social Care Trust, Belfast (W.G.M.), UK Brigham and Women's Hospital (B.H., B.J.Q.) Massachusetts General Hospital, Harvard University (E.O.), Boston, Massachusetts Yale New Haven Hospital, New Haven, Connecticut (P.H., V.P.) Department of Pathology, University of Hong Kong, Hong Kong, China (P.I.) Department of Pathology, Medical University of Graz, Graz, Austria (S.L.) Bellvitge University Hospital, IDIBELL, Barcelona (A.V., X.M.G.) Hospital Universitari Arnau de Vilanova, University of Lleida, IRBLLEIDA, Lleida (X.M.G.), CIBERONC, Spain Weill Cornell Medical College, New York, New York (L.H.E.) Stanford University Medical Center, Stanford, California (T.A.L.) Johns Hopkins University School of Medicine, Baltimore, Maryland (I.M.S.).

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http://dx.doi.org/10.1097/PGP.0000000000000496DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296838PMC
January 2019

Loss of ARID1A expression in endometrial samplings is associated with the risk of endometrial carcinoma.

Gynecol Oncol 2018 09 4;150(3):426-431. Epub 2018 Jul 4.

Kelly Gynecologic Oncology Service, Department of Gynecology and Obstetrics, Johns Hopkins School of Medicine, Baltimore, MD, United States of America.

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https://linkinghub.elsevier.com/retrieve/pii/S00908258183100
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http://dx.doi.org/10.1016/j.ygyno.2018.06.025DOI Listing
September 2018

Precancerous Lesions of Ovarian Cancer-A US Perspective.

J Natl Cancer Inst 2018 07;110(7):692-693

The Breast and Ovarian Cancer Program, Sidney Kimmel Comprehensive Cancer Center.

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http://dx.doi.org/10.1093/jnci/djx269DOI Listing
July 2018

Independent development of endometrial epithelium and stroma within the same endometriosis.

J Pathol 2018 07 2;245(3):265-269. Epub 2018 May 2.

Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1002/path.5082DOI Listing
July 2018

Tumor-associated macrophages and the tumor immune microenvironment of primary and recurrent epithelial ovarian cancer.

Hum Pathol 2018 04 27;74:135-147. Epub 2017 Dec 27.

Bloomberg-Kimmel Institute at Johns Hopkins, Baltimore, MD 21287; Department of Oncology, Johns Hopkins Hospital, Baltimore, MD 21287. Electronic address:

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http://dx.doi.org/10.1016/j.humpath.2017.12.010DOI Listing
April 2018

CINdex: A Bioconductor Package for Analysis of Chromosome Instability in DNA Copy Number Data.

Cancer Inform 2017 13;16:1176935117746637. Epub 2017 Dec 13.

Innovation Center for Biomedical Informatics, Georgetown University, Washington, DC, USA.

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http://dx.doi.org/10.1177/1176935117746637DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5761903PMC
December 2017

Mutation of NRAS is a rare genetic event in ovarian low-grade serous carcinoma.

Hum Pathol 2017 10 2;68:87-91. Epub 2017 Sep 2.

Department of Pathology, The Johns Hopkins University School of Medicine, Baltimore, MD 21231; Sidney Kimmel Comprehensive Cancer Center, The Johns Hopkins University School of Medicine, Baltimore, MD 21231; Department of Gynecology and Obstetrics, The Johns Hopkins University School of Medicine, Baltimore, MD 21231. Electronic address:

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http://dx.doi.org/10.1016/j.humpath.2017.08.021DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696063PMC
October 2017

Endometriosis: benign, malignant, or something in between?

Oncotarget 2017 Oct 19;8(45):78263-78264. Epub 2017 Sep 19.

Ie-Ming Shih: Departments of Pathology, Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://dx.doi.org/10.18632/oncotarget.21051DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5667960PMC
October 2017

The novel ZIP4 regulation and its role in ovarian cancer.

Oncotarget 2017 Oct 30;8(52):90090-90107. Epub 2017 Sep 30.

Department of Obstetrics and Gynecology, Indiana University School of Medicine, Indianapolis, IN 46202, USA.

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http://dx.doi.org/10.18632/oncotarget.21435DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5685734PMC
October 2017

Tubal origin of ovarian cancer - the double-edged sword of haemoglobin.

J Pathol 2017 05 23;242(1):3-6. Epub 2017 Mar 23.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, Maryland, USA.

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http://dx.doi.org/10.1002/path.4875DOI Listing
May 2017

Cancer-Associated Mutations in Endometriosis without Cancer.

N Engl J Med 2017 05;376(19):1835-1848

From the Departments of Obstetrics and Gynaecology (M.S.A., C.A., C.W., P.J.Y., D.G.H.) and Pathology and Laboratory Medicine (M.S.A., T.M.N., J. Senz, B.T.-C., C.B.G., D.G.H.), University of British Columbia, the Department of Anatomical Pathology, Vancouver General Hospital (T.M.N., H.M.H., J.H., V.L., B.T.-C., A.W., C.B.G., D.G.H.), the Department of Molecular Oncology, British Columbia Cancer Agency (H.M.H., A.L., V.L., N.B., D.G.H.), and the BC Women's Centre for Pelvic Pain and Endometriosis, BC Women's Hospital and Health Centre (F.W., N.O., C.A., C.W., P.J.Y.) - all in Vancouver, BC, Canada; the Department of Oncology (N.P., C.T., K.W.K., L.D., T.-L.W., B.V., I.-M.S.) and Ludwig Center (N.P., Y.W., J.D.C., M.Z., M.P., W.M., A.M., K.W.K., L.D., B.V.), Sidney Kimmel Comprehensive Cancer Center, the Departments of Pathology (N.P., A.A., M.N., L.D.W., T.-L.W., B.V., I.-M.S.) and Gynecology and Obstetrics (J. Segars, I.-M.S.), Johns Hopkins Medical Institutions, Personal Genome Diagnostics (S.J.), and Johns Hopkins University Howard Hughes Medical Institute (B.V.) - all in Baltimore; the Department of Pathology, Seirei Mikatahara Hospital (A.A., H.O.), and the Department of Tumor Pathology, Hamamatsu University School of Medicine (A.A.), Hamamatsu, and the Department of Molecular Pathology, Hiroshima University School of Medicine, Hiroshima (A.A.) - all in Japan; the Department of Pathology, University Medical Center Utrecht, Utrecht, the Netherlands (M.N.); the Departments of Obstetrics and Gynecology (T.S.) and Pathology (R.A., A.H.), Lenox Hill Hospital-Northwell Health (Hofstra University), New York; and the Department of Pathology, Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Tao-Yuan City, Taiwan (R.-C.W.).

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http://dx.doi.org/10.1056/NEJMoa1614814DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5555376PMC
May 2017

PD-L1 Expression in Human Placentas and Gestational Trophoblastic Diseases.

Int J Gynecol Pathol 2017 Mar;36(2):146-153

Departments of Pathology, Gynecology and Obstetrics (E.V., R.J.K., T.-L.W., I.-M.S.) Oncology (E.V., R.J.K., T.-L.W., I.-M.S.), the Johns Hopkins Medical Institutions, Baltimore, Maryland.

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http://dx.doi.org/10.1097/PGP.0000000000000305DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518625PMC
March 2017

CCNE1 copy-number gain and overexpression identify ovarian clear cell carcinoma with a poor prognosis.

Mod Pathol 2017 02 21;30(2):297-303. Epub 2016 Oct 21.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://dx.doi.org/10.1038/modpathol.2016.160DOI Listing
February 2017

Cancer Implications for Patients with Endometriosis.

Semin Reprod Med 2017 01 3;35(1):110-116. Epub 2017 Jan 3.

Kelly Gynecologic Oncology Service, Department of Gynecology and Obstetrics, Johns Hopkins Medicine, Baltimore, Maryland.

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http://dx.doi.org/10.1055/s-0036-1597120DOI Listing
January 2017

Ovarian Cancer Chemoresistance Relies on the Stem Cell Reprogramming Factor PBX1.

Cancer Res 2016 11 2;76(21):6351-6361. Epub 2016 Sep 2.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, Maryland.

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http://dx.doi.org/10.1158/0008-5472.CAN-16-0980DOI Listing
November 2016

Biologically inspired survival analysis based on integrating gene expression as mediator with genomic variants.

Comput Biol Med 2016 10 31;77:231-9. Epub 2016 Aug 31.

Bradley Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, VA 22203, USA. Electronic address:

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http://dx.doi.org/10.1016/j.compbiomed.2016.08.020DOI Listing
October 2016

Adenocarcinoma of Mullerian origin: review of pathogenesis, molecular biology, and emerging treatment paradigms.

Gynecol Oncol Res Pract 2015 12;2. Epub 2015 May 12.

Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, Duke Cancer Institute, Duke University Medical Center, Durham, NC 27710 USA.

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http://dx.doi.org/10.1186/s40661-015-0008-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880836PMC
May 2016

ChIP-BIT: Bayesian inference of target genes using a novel joint probabilistic model of ChIP-seq profiles.

Nucleic Acids Res 2016 Apr 23;44(7):e65. Epub 2015 Dec 23.

Bradley Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, 900 North Glebe Road, Arlington, VA 22203, USA

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http://dx.doi.org/10.1093/nar/gkv1491DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4838354PMC
April 2016

Inactivating ARID1A Tumor Suppressor Enhances TERT Transcription and Maintains Telomere Length in Cancer Cells.

J Biol Chem 2016 Apr 7;291(18):9690-9. Epub 2016 Mar 7.

From the Department of Pathology, the Sidney Kimmel Comprehensive Cancer Center, and the Department of Gynecology/Obstetrics, Johns Hopkins University School of Medicine, Baltimore, Maryland 21231,

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http://dx.doi.org/10.1074/jbc.M115.707612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4850306PMC
April 2016

The Dualistic Model of Ovarian Carcinogenesis: Revisited, Revised, and Expanded.

Am J Pathol 2016 Apr;186(4):733-47

Departments of Pathology, Gynecology and Obstetrics and Oncology, Johns Hopkins Medical Institutions, Baltimore, Maryland.

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http://dx.doi.org/10.1016/j.ajpath.2015.11.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5808151PMC
April 2016

Molecular Alterations of TP53 are a Defining Feature of Ovarian High-Grade Serous Carcinoma: A Rereview of Cases Lacking TP53 Mutations in The Cancer Genome Atlas Ovarian Study.

Int J Gynecol Pathol 2016 Jan;35(1):48-55

Departments of Pathology (R.V., I.-M.S., R.J.K.), Division of Gynecologic Pathology Gynecology and Obstetrics (R.V., I.-M.S., R.J.K.) Oncology (I.-M.S., R.J.K.), The Johns Hopkins University School of Medicine and Hospital, Baltimore, Maryland Departments of Surgery (Gynecology Service) (D.A.L.) Pathology (R.A.S.), Memorial Sloan-Kettering Cancer Center, New York, New York Department of Pathology (C.Z.), University of California, San Francisco, California.

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http://content.wkhealth.com/linkback/openurl?sid=WKPTLP:land
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http://dx.doi.org/10.1097/PGP.0000000000000207DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4696053PMC
January 2016

Seromucinous Tumors of the Ovary. What's in a Name?

Int J Gynecol Pathol 2016 Jan;35(1):78-81

Departments of Pathology, Gynecology/Obstetrics, and Oncology, The Johns Hopkins University School of Medicine, The Johns Hopkins Hospital, Baltimore, Maryland.

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http://dx.doi.org/10.1097/PGP.0000000000000266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5512580PMC
January 2016

Laminin C1 expression by uterine carcinoma cells is associated with tumor progression.

Gynecol Oncol 2015 Nov 3;139(2):338-44. Epub 2015 Sep 3.

Kelly Gynecologic Oncology Service, Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD, United States; Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ygyno.2015.08.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4862403PMC
November 2015

Clonality analysis of combined Brenner and mucinous tumours of the ovary reveals their monoclonal origin.

J Pathol 2015 Oct 23;237(2):146-51. Epub 2015 Jul 23.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://dx.doi.org/10.1002/path.4572DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703556PMC
October 2015

Mevalonate Pathway Antagonist Suppresses Formation of Serous Tubal Intraepithelial Carcinoma and Ovarian Carcinoma in Mouse Models.

Clin Cancer Res 2015 Oct 24;21(20):4652-62. Epub 2015 Jun 24.

Department of Pathology, School of Medicine, Johns Hopkins University, Baltimore, Maryland. The Sidney Kimmel Comprehensive Cancer Center, School of Medicine, Johns Hopkins University, Baltimore, Maryland. Department of Gynecology/Obstetrics, School of Medicine, Johns Hopkins University, Baltimore, Maryland.

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http://clincancerres.aacrjournals.org/content/21/20/4652.ful
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http://clincancerres.aacrjournals.org/cgi/doi/10.1158/1078-0
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http://dx.doi.org/10.1158/1078-0432.CCR-14-3368DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4609247PMC
October 2015

BACOM2.0 facilitates absolute normalization and quantification of somatic copy number alterations in heterogeneous tumor.

Sci Rep 2015 Sep 9;5:13955. Epub 2015 Sep 9.

Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, VA 22203, USA.

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http://www.nature.com/articles/srep13955
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http://dx.doi.org/10.1038/srep13955DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4563570PMC
September 2015

ARID1A Deficiency Impairs the DNA Damage Checkpoint and Sensitizes Cells to PARP Inhibitors.

Cancer Discov 2015 Jul 11;5(7):752-67. Epub 2015 Jun 11.

Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, Texas. Department of Medical Oncology, Tongji Hospital, Tongji Medical College, The Huazhong University of Science and Technology, Wuhan, P.R. China.

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http://cancerdiscovery.aacrjournals.org/cgi/doi/10.1158/2159
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http://dx.doi.org/10.1158/2159-8290.CD-14-0849DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4497871PMC
July 2015

Inhibition of Spleen Tyrosine Kinase Potentiates Paclitaxel-Induced Cytotoxicity in Ovarian Cancer Cells by Stabilizing Microtubules.

Cancer Cell 2015 Jul 18;28(1):82-96. Epub 2015 Jun 18.

Department of Pathology and Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins Medical Institutions, Baltimore, MD 21205, USA; Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD 21287, USA. Electronic address:

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http://www.cell.com/cancer-cell/pdf/S1535-6108(15)00185-3.pd
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http://linkinghub.elsevier.com/retrieve/pii/S153561081500185
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http://dx.doi.org/10.1016/j.ccell.2015.05.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5257279PMC
July 2015

Increased proliferation in atypical hyperplasia/endometrioid intraepithelial neoplasia of the endometrium with concurrent inactivation of ARID1A and PTEN tumour suppressors.

J Pathol Clin Res 2015 Jul 27;1(3):186-93. Epub 2015 May 27.

Department of PathologyJohns Hopkins Medical InstitutionsBaltimoreMaryland; Department of Gynecology and ObstetricsJohns Hopkins Medical InstitutionsBaltimoreMaryland.

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http://dx.doi.org/10.1002/cjp2.22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4939882PMC
July 2015

Immunohistochemical expression of ARID1A in penile squamous cell carcinomas: a tissue microarray study of 112 cases.

Hum Pathol 2015 May 12;46(5):761-6. Epub 2015 Feb 12.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD 31231; Department of Urology, Johns Hopkins Medical Institutions, Baltimore, MD 31231; Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD 31231.

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http://dx.doi.org/10.1016/j.humpath.2015.01.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4696050PMC
May 2015

Loss of ALDH1A1 expression is an early event in the pathogenesis of ovarian high-grade serous carcinoma.

Mod Pathol 2015 Mar 12;28(3):437-45. Epub 2014 Sep 12.

1] Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA [2] Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://dx.doi.org/10.1038/modpathol.2014.89DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4344882PMC
March 2015

Expression Patterns of VEGF and Flk-1 in Human Endometrium during the Menstrual Cycle.

J Reprod Infertil 2015 Jan-Mar;16(1):3-9

Department of Gynecology and Obstetrics, School of Medicine, Johns Hopkins University, Baltimore, United States.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4322178PMC
February 2015

GATA-3 expression in trophoblastic tissues: an immunohistochemical study of 445 cases, including diagnostic utility.

Am J Surg Pathol 2015 Jan;39(1):101-8

*Department of Pathology, Division of Gynecologic Pathology §§Department of Pathology, Division of Urologic Pathology Departments of ‡Gynecology & Obstetrics §Oncology, The Johns Hopkins University School of Medicine and Hospital ∥Department of Pathology, The Johns Hopkins Bayview Hospital ‡‡Department of International Health, Bloomberg School of Public Health, The Johns Hopkins University School of Medicine, Baltimore, MD †PhenoPath Laboratories, Seattle, WA ¶Department of Pathology, Division of Women's and Perinatal Pathology, Brigham and Women's Hospital, Boston, MA #Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN **Robert J. Tomsich Pathology and Laboratory Medicine Institute, The Cleveland Clinic, Cleveland, OH ††Department of Pathology, South Miami Hospital, Baptist Health, South Miami, FL.

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http://dx.doi.org/10.1097/PAS.0000000000000315DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4268033PMC
January 2015

UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples.

Bioinformatics 2015 Jan 10;31(1):137-9. Epub 2014 Sep 10.

Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, VA 22203, Department of Molecular Carcinogenesis, The University of Texas MD Anderson Cancer Center, Smithville, TX 78957, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057, Departments of Pathology and Oncology, Johns Hopkins University, Baltimore, MD 21231 and Department of Surgery, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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http://bioinformatics.oxfordjournals.org/content/early/2014/
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http://bioinformatics.oxfordjournals.org/cgi/doi/10.1093/bio
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http://dx.doi.org/10.1093/bioinformatics/btu607DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4271149PMC
January 2015

KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring.

Bioinformatics 2015 Jan 30;31(2):287-9. Epub 2014 Sep 30.

Department of Electrical & Computer Engineering, Virginia Tech, Arlington, VA 22203, Departments of Pathology and Oncology, Johns Hopkins University, Baltimore, MD 21231, Research Center for Genetic Medicine, Children's National Medical Center, Washington, DC 20010, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20057 and Department of Medicine, Wake Forest University, Winston-Salem, NC 27157, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu632DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4287948PMC
January 2015

Precursors of ovarian cancer in the fallopian tube: serous tubal intraepithelial carcinoma--an update.

J Obstet Gynaecol Res 2015 Jan 20;41(1):6-11. Epub 2014 Oct 20.

Departments of Pathology and Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, Maryland, USA; Department of Gynecology and Obstetrics, University Hospital Aachen, Aachen, Germany.

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http://doi.wiley.com/10.1111/jog.12550
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352308PMC
January 2015

BRAF mutation is associated with a specific cell type with features suggestive of senescence in ovarian serous borderline (atypical proliferative) tumors.

Am J Surg Pathol 2014 Dec;38(12):1603-11

Departments of *Pathology and Gynecology and Obstetrics #Oncology, Johns Hopkins Medical Institutions, Baltimore, MD ¶The Wistar Institute, Philadelphia, PA †Department of Gynecology and Obstetrics, University Hospital Aachen, Aachen, Germany ‡Unit of Virus, Lifestyle and Genes, Danish Cancer Society Research Center ∥Juliane Marie Centre, Rigshospitalet, University of Copenhagen, Copenhagen §Department of Pathology, Hvidovre Hospital, Denmark Gynecologic Clinic, Hvidovre, Denmark.

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http://dx.doi.org/10.1097/PAS.0000000000000313DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4314953PMC
December 2014

ARID1A immunohistochemistry improves outcome prediction in invasive urothelial carcinoma of urinary bladder.

Hum Pathol 2014 Nov 23;45(11):2233-9. Epub 2014 Jul 23.

Department of Pathology, Johns Hopkins University, Baltimore 21231, MD; Department of Oncology, Johns Hopkins University, Baltimore 21231, MD; Department of Urology, Johns Hopkins University, Baltimore 21231, MD. Electronic address:

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http://dx.doi.org/10.1016/j.humpath.2014.07.003DOI Listing
November 2014

Characterization of the immune cell repertoire in the normal fallopian tube.

Int J Gynecol Pathol 2014 Nov;33(6):581-91

*Department of Molecular and Translational Medicine (L.A., S.L., F.F., W.V.) ‡Laboratory of Genetic Disorders of Childhood, "A Nocivelli" Institute for Molecular Medicine, Department of Pathology, Spedali Civili of Brescia, Brescia, Italy (D.M.) †Department of Pathology (L.A., I.-M.S., R.J.K.), Johns Hopkins University, Baltimore, Maryland ∥Department of Pathology and Immunology (W.V.), Washington University School of Medicine, Saint Louis, Missouri.

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https://insights.ovid.com/crossref?an=00004347-201411000-000
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http://dx.doi.org/10.1097/PGP.0000000000000095DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4617751PMC
November 2014

Notch3 interactome analysis identified WWP2 as a negative regulator of Notch3 signaling in ovarian cancer.

PLoS Genet 2014 Oct 30;10(10):e1004751. Epub 2014 Oct 30.

Departments of Pathology and Gynecology/Obstetrics, The Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America; Department of Oncology, The Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1004751DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4214668PMC
October 2014

Frequent CCNE1 amplification in endometrial intraepithelial carcinoma and uterine serous carcinoma.

Mod Pathol 2014 Jul 6;27(7):1014-9. Epub 2013 Dec 6.

1] Department of Pathology, Baltimore, MD, USA [2] Departments of Gynecology and Obstetrics, and Oncology, The Johns Hopkins Medical Institutions, Baltimore, MD, USA.

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http://www.nature.com/articles/modpathol2013209
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July 2014

Roles of deletion of Arid1a, a tumor suppressor, in mouse ovarian tumorigenesis.

J Natl Cancer Inst 2014 Jul 4;106(7). Epub 2014 Jun 4.

Affiliations of authors: Department of Pathology, Departments of Gynecology and Obstetrics and Oncology, Johns Hopkins University School of Medicine, Baltimore, MD (BG, YSR, RCW, YW, TLW, IMS); Department of Pathology, Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Taoyuan, Taiwan (RCW); Department of Surgery, University of Michigan, Ann Arbor, MI (ZW); Genetics Endocrinology Section, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD (current address for BG).

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4056776PMC
July 2014

Discovery of a cell: reflections on the checkered history of intermediate trophoblast and update on its nature and pathologic manifestations.

Int J Gynecol Pathol 2014 Jul;33(4):339-47

Departments of Pathology, Gynecology and Obstetrics and Oncology, The Johns Hopkins Medical Institution, Baltimore, Maryland.

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http://content.wkhealth.com/linkback/openurl?sid=WKPTLP:land
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http://dx.doi.org/10.1097/PGP.0000000000000144DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352309PMC
July 2014

Evaluation of microinvasion and lymph node involvement in ovarian serous borderline/atypical proliferative serous tumors: a morphologic and immunohistochemical analysis of 37 cases.

Am J Surg Pathol 2014 Jun;38(6):743-55

Departments of *Pathology †Oncology §Gynecology and Obstetrics, Johns Hopkins University School of Medicine ‡Department of Epidemiology, Johns Hopkins University Bloomberg School of Public Health, Baltimore, MD.

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http://dx.doi.org/10.1097/PAS.0000000000000155DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4020949PMC
June 2014

The emerging roles of ARID1A in tumor suppression.

Cancer Biol Ther 2014 Jun 11;15(6):655-64. Epub 2014 Mar 11.

Department of Pathology and Pathobiology Graduate Program; Johns Hopkins University School of Medicine; Baltimore, MD USA; Departments of Oncology and Gynecology and Obstetrics; Johns Hopkins University School of Medicine; Baltimore, MD USA.

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http://dx.doi.org/10.4161/cbt.28411DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4049780PMC
June 2014

Molecular characterization of undifferentiated carcinoma associated with endometrioid carcinoma.

Am J Surg Pathol 2014 May;38(5):660-5

Departments of *Pathology §Gynecology and Obstetrics ∥Oncology, Johns Hopkins Medical Institutions, Baltimore, MD ‡Department of Pathology, Magee-Womens Hospital, University of Pittsburgh Medical Center, Pittsburg, PA †Department of Pathology, Seirei Mikatahara Hospital, Hamamatsu, Japan.

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http://dx.doi.org/10.1097/PAS.0000000000000166DOI Listing
May 2014

Long interspersed element-1 protein expression is a hallmark of many human cancers.

Am J Pathol 2014 May 6;184(5):1280-6. Epub 2014 Mar 6.

Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland; High Throughput Biology Center, Johns Hopkins University School of Medicine, Baltimore, Maryland; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland. Electronic address:

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http://dx.doi.org/10.1016/j.ajpath.2014.01.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4005969PMC
May 2014

Gene expression signatures of primary and metastatic uterine leiomyosarcoma.

Hum Pathol 2014 Apr 13;45(4):691-700. Epub 2013 Nov 13.

Departments of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, MD 21231, USA; Department of Oncology, Johns Hopkins Medical Institutions, Baltimore, MD 21231, USA. Electronic address:

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http://dx.doi.org/10.1016/j.humpath.2013.11.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965648PMC
April 2014

RSF1 is a positive regulator of NF-κB-induced gene expression required for ovarian cancer chemoresistance.

Cancer Res 2014 Apr 24;74(8):2258-69. Epub 2014 Feb 24.

Authors' Affiliations: Department of Life and Nanopharmaceutical Science; Division of Molecular Biology, College of Pharmacy, Kyung Hee University, Seoul, South Korea; and Department of Pathology and Oncology, Johns Hopkins Medical Institutions, Baltimore, Maryland.

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http://cancerres.aacrjournals.org/content/early/2014/03/31/0
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http://dx.doi.org/10.1158/0008-5472.CAN-13-2459DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4352305PMC
April 2014

Origin and pathogenesis of pelvic (ovarian, tubal, and primary peritoneal) serous carcinoma.

Annu Rev Pathol 2014 5;9:27-45. Epub 2013 Aug 5.

Division of Gynecologic Pathology, Departments of.

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http://dx.doi.org/10.1146/annurev-pathol-020712-163949DOI Listing
March 2014

Frequent somatic mutations of the telomerase reverse transcriptase promoter in ovarian clear cell carcinoma but not in other major types of gynaecological malignancy.

J Pathol 2014 Mar;232(4):473-81

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD, USA; Department of Pathology, Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Taoyuan, Taiwan.

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http://dx.doi.org/10.1002/path.4315DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3946218PMC
March 2014

AISAIC: a software suite for accurate identification of significant aberrations in cancers.

Bioinformatics 2014 Feb 29;30(3):431-3. Epub 2013 Nov 29.

Bradley Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, Arlington, VA 22203, USA, Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA, School of Computer Science and Technology, Xidian University, Xi'an 710126, China, Department of Oncology and Department of Gynecology/Obstetrics, Johns Hopkins University School of Medicine, Baltimore, MD 21231, USA, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC 20007, USA Department of Oncology and Department of Physiology and Biophysics, Georgetown University, Washington, DC 20057, USA and Department of Electrical Engineering and Computer Science, University of Michigan, An Arbor, MI 48109, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt693DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3904524PMC
February 2014

Identification of the NAC1-regulated genes in ovarian cancer.

Am J Pathol 2014 Jan 6;184(1):133-40. Epub 2013 Nov 6.

Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, Maryland; Sidney Kimmel Cancer Center, Johns Hopkins Medical Institutions, Baltimore, Maryland; Department of Gynecology and Obstetrics, Johns Hopkins Medical Institutions, Baltimore, Maryland. Electronic address:

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http://dx.doi.org/10.1016/j.ajpath.2013.09.024DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3873491PMC
January 2014

Ovarian Brenner tumour: a morphologic and immunohistochemical analysis suggesting an origin from fallopian tube epithelium.

Eur J Cancer 2013 Dec 5;49(18):3839-49. Epub 2013 Sep 5.

Department of Pathology, The Johns Hopkins Medical Institutions, Baltimore, MD, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ejca.2013.08.011DOI Listing
December 2013

Dedifferentiated endometrioid adenocarcinoma: An under-recognized but aggressive tumor?

Gynecol Oncol Case Rep 2013 6;5:25-7. Epub 2013 Mar 6.

Division of Gynecologic Oncology, Department of Gynecology and Obstetrics, Johns Hopkins University School of Medicine, 600 North Wolfe Street, Baltimore, MD, 21287, USA.

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http://dx.doi.org/10.1016/j.gynor.2013.02.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862303PMC
December 2013

Extrauterine inflammatory myofibroblastic tumor: A case report.

Gynecol Oncol Case Rep 2013 30;6:39-41. Epub 2013 Jul 30.

The Kelly Gynecologic Oncology Service, Department of Obstetrics and Gynecology, Johns Hopkins Medical Institutions, 600 North Wolfe Street, Phipps 281, Baltimore, MD 21287, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S2211338X130006
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http://dx.doi.org/10.1016/j.gynor.2013.07.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3862308PMC
December 2013

Establishing isogenic inducible cell lines using founder reporter lines and recombinase-mediated cassette exchange.

Biotechniques 2013 Nov;55(5):233-42

Departments of Pathology, Gynecology and Obstetrics, Johns Hopkins University School of Medicine, Baltimore, MD.

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http://dx.doi.org/10.2144/000114098DOI Listing
November 2013

The roles of ARID1A in gynecologic cancer.

J Gynecol Oncol 2013 Oct 2;24(4):376-81. Epub 2013 Oct 2.

Department of Pathology, National Taiwan University College of Medicine, Taipei, Taiwan.

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http://dx.doi.org/10.3802/jgo.2013.24.4.376DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3805919PMC
October 2013

Loss of ARID1A expression correlates with stages of tumor progression in uterine endometrioid carcinoma.

Am J Surg Pathol 2013 Sep;37(9):1342-8

*Department of Pathology, National Taiwan University Hospital and College of Medicine, Taipei, Taiwan †Department of Pathology, Johns Hopkins Medical Institutions, Baltimore, MD ‡Seirei Mikatahara General Hospital, Hamamatsu, Japan.

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http://dx.doi.org/10.1097/PAS.0b013e3182889dc3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3787317PMC
September 2013