Hugh G Patterton

Hugh G Patterton

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Hugh G Patterton

Hugh G Patterton

Publications by authors named "Hugh G Patterton"

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13Publications

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The effect of epigenetic modifications on the secondary structures and possible binding positions of the N-terminal tail of histone H3 in the nucleosome: a computational study.

Authors:
Louis L du Preez Hugh-G Patterton

J Mol Model 2017 Apr 28;23(4):137. Epub 2017 Mar 28.

Division of Bioinformatics and Department of Biochemistry, Stellenbosch University, Private Bag X1, Matieland, 7602, South Africa.

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http://dx.doi.org/10.1007/s00894-017-3308-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5391383PMC
April 2017

Bioinformatics education--perspectives and challenges out of Africa.

Authors:
Özlem Tastan Bishop Ezekiel F Adebiyi Ahmed M Alzohairy Dean Everett Kais Ghedira Amel Ghouila Judit Kumuthini Nicola J Mulder Sumir Panji Hugh-G Patterton

Brief Bioinform 2015 Mar 2;16(2):355-64. Epub 2014 Jul 2.

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http://dx.doi.org/10.1093/bib/bbu022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4364068PMC
March 2015

The epigenome of Trypanosoma brucei: a regulatory interface to an unconventional transcriptional machine.

Authors:
Johannes P Maree Hugh-G Patterton

Biochim Biophys Acta 2014 Sep 3;1839(9):743-50. Epub 2014 Jun 3.

Advanced Biomolecular Research Cluster, University of the Free State, PO Box 339, Bloemfontein 9332, South Africa. Electronic address:

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http://dx.doi.org/10.1016/j.bbagrm.2014.05.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138444PMC
September 2014

Research capacity. Enabling the genomic revolution in Africa.

Authors:
Charles Rotimi Akin Abayomi Alash'le Abimiku Victoria May Adabayeri Clement Adebamowo Ezekiel Adebiyi Adebowale D Ademola Adebowale Adeyemo Dwomoa Adu Dissou Affolabi Godfred Agongo Samuel Ajayi Sally Akarolo-Anthony Rufus Akinyemi Albert Akpalu Marianne Alberts Orlando Alonso Betancourt Ahmed Mansour Alzohairy Gobena Ameni Olukemi Amodu Gabriel Anabwani Kristian Andersen Fatiu Arogundade Oyedunni Arulogun Danny Asogun Rasheed Bakare Naby Balde Mary Lynn Baniecki Christine Beiswanger Alia Benkahla Lara Bethke Micheal Boehnke Vincent Boima James Brandful Andrew I Brooks Frank C Brosius Chester Brown Bruno Bucheton David T Burke Barrington G Burnett Stacy Carrington-Lawrence Nadia Carstens John Chisi Alan Christoffels Richard Cooper Heather Cordell Nigel Crowther Talishiea Croxton Jantina de Vries Leslie Derr Peter Donkor Seydou Doumbia Audrey Duncanson Ivy Ekem Ahmed El Sayed Mark E Engel John C K Enyaru Dean Everett Faisal M Fadlelmola Eyitayo Fakunle Kenneth H Fischbeck Anne Fischer Onikepe Folarin Junaid Gamieldien Robert F Garry Simani Gaseitsiwe Rasheed Gbadegesin Anita Ghansah Maria Giovanni Parham Goesbeck F Xavier Gomez-Olive Donald S Grant Ravnit Grewal Mark Guyer Neil A Hanchard Christian T Happi Scott Hazelhurst Branwen J Hennig Christiane Hertz- Fowler Winston Hide Friedhelm Hilderbrandt Christopher Hugo-Hamman Muntaser E Ibrahim Regina James Yasmina Jaufeerally-Fakim Carolyn Jenkins Ute Jentsch Pan-Pan Jiang Moses Joloba Victor Jongeneel Fourie Joubert Mukthar Kader Kathleen Kahn Pontiano Kaleebu Saidi H Kapiga Samar Kamal Kassim Ishmael Kasvosve Jonathan Kayondo Bernard Keavney Adeodata Kekitiinwa Sheik Humarr Khan Paul Kimmel Mary-Claire King Robert Kleta Mathurin Koffi Jeffrey Kopp Matthias Kretzler Judit Kumuthini Samuel Kyobe Catherine Kyobutungi Daniel T Lackland Karen A Lacourciere Guida Landouré Rita Lawlor Thomas Lehner Maia Lesosky Naomi Levitt Katherine Littler Zane Lombard Jeanne F Loring Sylvester Lyantagaye Annette Macleod Ebony B Madden Chengetai R Mahomva Julie Makani Manmak Mamven Marape Marape Graeme Mardon Patricia Marshall Darren P Martin Daniel Masiga Robin Mason Michael Mate-Kole Enock Matovu Mary Mayige Bongani M Mayosi Jean Claude Mbanya Sheryl A McCurdy Mark I McCarthy Helen McIlleron S O Mc'Ligeyo Corrine Merle Ana Olga Mocumbi Charles Mondo John V Moran Ayesha Motala Marva Moxey-Mims Wata Sununguko Mpoloka Chisomo L Msefula Thuli Mthiyane Nicola Mulder Gebregziab her Mulugeta Dieuodonne Mumba John Musuku Mo Nagdee Oyekanmi Nash Daouda Ndiaye Anh Quynh Nguyen Mark Nicol Oathokwa Nkomazana Shane Norris Betty Nsangi Alexander Nyarko Moffat Nyirenda Eileen Obe Reginald Obiakor Abraham Oduro Solomon F Ofori-Acquah Okechukwu Ogah Stephen Ogendo Kwaku Ohene-Frempong Akinlolu Ojo Timothy Olanrewaju John Oli Charlotte Osafo Odile Ouwe Missi Oukem-Boyer Bruce Ovbiagele Andrew Owen Mayowa Ojo Owolabi Lukman Owolabi Ellis Owusu-Dabo Guillaume Pare Rulan Parekh Hugh G Patterton Margaret B Penno Jane Peterson Rembert Pieper Jacob Plange-Rhule Martin Pollak Julia Puzak Rajkumar S Ramesar Michele Ramsay Rebekah Rasooly Shiksha Reddy Pardis C Sabeti Kwamena Sagoe Tunde Salako Oumar Samassékou Manjinder S Sandhu Osman Sankoh Fred Stephen Sarfo Marie Sarr Gasnat Shaboodien Issa Sidibe Gustave Simo Martin Simuunza Liam Smeeth Eugene Sobngwi Himla Soodyall Hermann Sorgho Oumou Sow Bah Sudha Srinivasan Dan J Stein Ezra S Susser Carmen Swanepoel Godfred Tangwa Andrew Tareila Ozlem Tastan Bishop Bamidele Tayo Nicki Tiffin Halidou Tinto Ekaete Tobin Stephen Meir Tollman Mahamadou Traoré Marsha J Treadwell Jennifer Troyer Masego Tsimako-Johnstone Vincent Tukei Ifeoma Ulasi Nzovu Ulenga Beverley van Rooyen Ablo Prudence Wachinou Salina P Waddy Alisha Wade Misaki Wayengera James Whitworth Louise Wideroff Cheryl A Winkler Sarah Winnicki Ambroise Wonkam Mengistu Yewondwos Tadase sen Nathan Yozwiak Heather Zar

Science 2014 Jun;344(6190):1346-8

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http://dx.doi.org/10.1126/science.1251546DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4138491PMC
June 2014

Secondary structures of the core histone N-terminal tails: their role in regulating chromatin structure.

Authors:
Louis L du Preez Hugh-G Patterton

Subcell Biochem 2013 ;61:37-55

Advanced Biomolecular Research Cluster, University of the Free State, 339, Bloemfontein, 9300, South Africa.

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http://dx.doi.org/10.1007/978-94-007-4525-4_2DOI Listing
February 2014

AnchorMS: a bioinformatics tool to derive structural information from the mass spectra of cross-linked protein complexes.

Authors:
Shannon L N Mayne Hugh-G Patterton

Bioinformatics 2014 Jan 30;30(1):125-6. Epub 2013 Oct 30.

Advanced Biomolecular Research Cluster, University of the Free State, P.O. Box 339, Bloemfontein 9300, South Africa.

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http://dx.doi.org/10.1093/bioinformatics/btt617DOI Listing
January 2014

Nano-electrospray tandem mass spectrometric analysis of the acetylation state of histones H3 and H4 in stationary phase in Saccharomyces cerevisiae.

Authors:
Mzwanele Ngubo Gabré Kemp Hugh G Patterton

BMC Biochem 2011 Jul 4;12:34. Epub 2011 Jul 4.

Advanced Biomolecular Research Cluster, University of the Free State, Bloemfontein, South Africa.

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http://dx.doi.org/10.1186/1471-2091-12-34DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3136420PMC
July 2011

Histone octamer helical tubes suggest that an internucleosomal four-helix bundle stabilizes the chromatin fiber.

Authors:
Timothy D Frouws Hugh-G Patterton Bryan T Sewell

Biophys J 2009 Apr;96(8):3363-71

Department of Biotechnology, University of the Western Cape, Cape Town, South Africa.

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http://dx.doi.org/10.1016/j.bpj.2008.10.075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2718273PMC
April 2009

The Saccharomyces cerevisiae linker histone Hho1p is essential for chromatin compaction in stationary phase and is displaced by transcription.

Authors:
Georgia Schäfer Christopher R E McEvoy Hugh-G Patterton

Proc Natl Acad Sci U S A 2008 Sep 17;105(39):14838-43. Epub 2008 Sep 17.

Department of Microbial, Biochemical, and Food Biotechnology, University of the Free State, P.O. Box 339, Bloemfontein 9300, South Africa.

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http://dx.doi.org/10.1073/pnas.0806337105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2567454PMC
September 2008

Non-random clustering of stress-related genes during evolution of the S. cerevisiae genome.

Authors:
Debra T Burhans Lakshmi Ramachandran Jianxin Wang Ping Liang Hugh G Patterton Michael Breitenbach William C Burhans

BMC Evol Biol 2006 Jul 21;6:58. Epub 2006 Jul 21.

Dept. of Computer Science and Bioinformatics Program, Canisius College, Buffalo, NY, 14208, USA.

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http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2148-6-58DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1550265PMC
July 2006

The Saccharomyces cerevisiae linker histone Hho1p, with two globular domains, can simultaneously bind to two four-way junction DNA molecules.

Authors:
Georgia Schäfer Elizabeth M Smith Hugh G Patterton

Biochemistry 2005 Dec;44(50):16766-75

Department of Biotechnology, University of the Free State, P.O. Box 339, Bloemfontein, 9300 South Africa.

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http://dx.doi.org/10.1021/bi0511787DOI Listing
December 2005

Calculating the statistical significance of physical clusters of co-regulated genes in the genome: the role of chromatin in domain-wide gene regulation.

Authors:
Cheng-Fu Chang Ka-Man Wai Hugh G Patterton

Nucleic Acids Res 2004 19;32(5):1798-807. Epub 2004 Mar 19.

Department of Molecular and Cell Biology and Institute for Infectious Diseases and Molecular Medicine, University of Cape Town, University Private Bag, Rondebosch 7701, South Africa.

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http://dx.doi.org/10.1093/nar/gkh507DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC390345PMC
July 2004

Saccharomyces cerevisiae Set1p is a methyltransferase specific for lysine 4 of histone H3 and is required for efficient gene expression.

Authors:
Simon Boa Claudette Coert Hugh-G Patterton

Yeast 2003 Jul;20(9):827-35

Room 427A, Molecular Biology Building, Department of Molecular and Cellular Biology, University of Cape Town, University Private Bag, Rondebosch 7700, South Africa.

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http://dx.doi.org/10.1002/yea.995DOI Listing
July 2003