Hirofumi Nakaoka

Hirofumi Nakaoka

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Hirofumi Nakaoka

Hirofumi Nakaoka

Publications by authors named "Hirofumi Nakaoka"

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51Publications

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Concurrent isolated retroperitoneal HGSC and STIC defined by somatic mutation analysis: a case report.

Diagn Pathol 2019 Feb 11;14(1):17. Epub 2019 Feb 11.

Department of Obstetrics and Gynecology, Niigata University Graduate School of Medical and Dental Sciences, 1-757 Asahimachi-dori, Niigata, 951-8510, Japan.

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http://dx.doi.org/10.1186/s13000-019-0795-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371506PMC
February 2019

High Order Formation and Evolution of Hornerin in Primates.

Genome Biol Evol 2018 12 1;10(12):3167-3175. Epub 2018 Dec 1.

Department of Genetics School of Life Sciences, SOKENDAI (Graduate University for Advanced Studies), Mishima, Japan.

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http://dx.doi.org/10.1093/gbe/evy208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6280949PMC
December 2018

Novel MXD4-NUTM1 fusion transcript identified in primary ovarian undifferentiated small round cell sarcoma.

Genes Chromosomes Cancer 2018 11;57(11):557-563

Department of Obstetrics and Gynecology, Niigata University Graduate School of Medical and Dental Sciences, Niigata, Japan.

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http://dx.doi.org/10.1002/gcc.22668DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221051PMC
November 2018

Systematic identification and characterization of regulatory elements derived from human endogenous retroviruses.

PLoS Genet 2017 Jul 12;13(7):e1006883. Epub 2017 Jul 12.

Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka, Japan.

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http://dx.doi.org/10.1371/journal.pgen.1006883DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5529029PMC
July 2017

Rapid and cost-effective high-throughput sequencing for identification of germline mutations of BRCA1 and BRCA2.

J Hum Genet 2017 Apr 9;62(5):561-567. Epub 2017 Feb 9.

Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, Shizuoka, Japan.

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http://dx.doi.org/10.1038/jhg.2017.5DOI Listing
April 2017

Comprehensive genetic testing approach for major inherited kidney diseases, using next-generation sequencing with a custom panel.

Clin Exp Nephrol 2017 Feb 26;21(1):63-75. Epub 2016 Feb 26.

Department of Nephrology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, 1-5-45 Yushima, Bunkyo, Tokyo, 113-8519, Japan.

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http://dx.doi.org/10.1007/s10157-016-1252-1DOI Listing
February 2017

Structure and evolution of the filaggrin gene repeated region in primates.

BMC Evol Biol 2017 01 11;17(1):10. Epub 2017 Jan 11.

Department of Genetics, School of Life Sciences, Graduate University for Advanced Studies (SOKENDAI), Mishima, 411-8540, Japan.

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http://dx.doi.org/10.1186/s12862-016-0851-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5225520PMC
January 2017

Shared Genetic Risk Factors of Intracranial, Abdominal, and Thoracic Aneurysms.

J Am Heart Assoc 2016 07 14;5(7). Epub 2016 Jul 14.

Department of Epidemiology, Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht, The Netherlands

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http://dx.doi.org/10.1161/JAHA.115.002603DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5015357PMC
July 2016

Assessment of Artificial MiRNA Architectures for Higher Knockdown Efficiencies without the Undesired Effects in Mice.

PLoS One 2015 18;10(8):e0135919. Epub 2015 Aug 18.

Department of Molecular Life Science, Division of Basic Medical Science and Molecular Medicine, School of Medicine, Tokai University, 143 Shimokasuya, Isehara, Kanagawa 259-1193, Japan; The Institute of Medical Sciences, Tokai University, 143 Shimokasuya, Isehara, Kanagawa 259-1193, Japan.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0135919PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4540464PMC
May 2016

Next generation sequencing: implications in personalized medicine and pharmacogenomics.

Mol Biosyst 2016 05;12(6):1818-30

Cardiogenetic Research Center, Rajaie Cardiovascular Medical and Research Center, Iran University of Medical Sciences, Niayesh-Vali asr Intersection, Tehran, Iran.

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http://dx.doi.org/10.1039/c6mb00115gDOI Listing
May 2016

Identification of rs671, a common variant of ALDH2, as a gout susceptibility locus.

Sci Rep 2016 05 16;6:25360. Epub 2016 May 16.

Department of Integrative Physiology and Bio-Nano Medicine, National Defense Medical College, 3-2 Namiki, Tokorozawa, Saitama 359-8513, Japan.

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http://dx.doi.org/10.1038/srep25360DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4867610PMC
May 2016

Distribution of HLA haplotypes across Japanese Archipelago: similarity, difference and admixture.

J Hum Genet 2015 Nov 23;60(11):683-90. Epub 2015 Jul 23.

Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, Shizuoka, Japan.

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http://dx.doi.org/10.1038/jhg.2015.90DOI Listing
November 2015

Aggregation of rare/low-frequency variants of the mitochondria respiratory chain-related proteins in rheumatoid arthritis patients.

J Hum Genet 2015 Aug 28;60(8):449-54. Epub 2015 May 28.

Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, Mishima, Japan.

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http://dx.doi.org/10.1038/jhg.2015.50DOI Listing
August 2015

Gene expression profiling reveals distinct molecular signatures associated with the rupture of intracranial aneurysm.

Stroke 2014 Aug 17;45(8):2239-45. Epub 2014 Jun 17.

From the Division of Human Genetics, Department of Integrated Genetics, National Institute of Genetics, Mishima, Japan (H.N., K.H., I.I.); Department of Human Genetics, Institute of Health Biosciences, The University of Tokushima Graduate School, Tokushima, Japan (A.T.); Department of Neurosurgery, Neurological Institute, Tokyo Women's Medical University, Tokyo, Japan (T.Y., H.K.); and Department of Neurosurgery, School of Medicine, Showa University, Tokyo, Japan (T.M.).

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https://www.ahajournals.org/doi/10.1161/STROKEAHA.114.005851
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http://dx.doi.org/10.1161/STROKEAHA.114.005851DOI Listing
August 2014

HLA-DPB1*04:01 allele is associated with non-obstructive azoospermia in Japanese patients.

Hum Genet 2013 Dec 10;132(12):1405-11. Epub 2013 Aug 10.

Division of Human Genetics, National Institute of Genetics, Yata 1111, Mishima, 411-8540, Japan,

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http://dx.doi.org/10.1007/s00439-013-1347-7DOI Listing
December 2013

Improvement of pronuclear injection-based targeted transgenesis (PITT) by iCre mRNA-mediated site-specific recombination.

Transgenic Res 2013 Aug 26;22(4):873-5. Epub 2013 Mar 26.

Division of Basic Medical Science and Molecular Medicine, Department of Molecular Life Science, Tokai University School of Medicine, 143 Shimokasuya, Isehara, Kanagawa 259-1193, Japan.

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http://link.springer.com/10.1007/s11248-013-9703-x
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http://dx.doi.org/10.1007/s11248-013-9703-xDOI Listing
August 2013

A nonsynonymous variant of IL1A is associated with endometriosis in Japanese population.

J Hum Genet 2013 Aug 2;58(8):517-20. Epub 2013 May 2.

Department of Obstetrics and Gynecology, Niigata University Graduate School of Medicine and Dental Sciences, Niigata, Japan.

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http://dx.doi.org/10.1038/jhg.2013.32DOI Listing
August 2013

Phase-defined complete sequencing of the HLA genes by next-generation sequencing.

BMC Genomics 2013 May 28;14:355. Epub 2013 May 28.

Division of Human Genetics, National Institute of Genetics, Shizuoka, Japan.

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http://dx.doi.org/10.1186/1471-2164-14-355DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3671147PMC
May 2013

Exome sequencing identifies novel rheumatoid arthritis-susceptible variants in the BTNL2.

J Hum Genet 2013 Apr 31;58(4):210-5. Epub 2013 Jan 31.

Department of Molecular Life Sciences, Division of Basic Medical Science and Molecular Medicine, Tokai University School of Medicine, Isehara, Japan.

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http://dx.doi.org/10.1038/jhg.2013.2DOI Listing
April 2013

Next-generation sequencing: impact of exome sequencing in characterizing Mendelian disorders.

J Hum Genet 2012 Oct 26;57(10):621-32. Epub 2012 Jul 26.

Division of Human Genetics, National Institute of Genetics, Mishima, Japan.

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http://www.nature.com/articles/jhg201291
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http://dx.doi.org/10.1038/jhg.2012.91DOI Listing
October 2012

Targeted transgenesis through pronuclear injection of improved vectors into in vitro fertilized eggs.

Transgenic Res 2012 Feb 25;21(1):225-6. Epub 2011 Mar 25.

Department of Molecular Life Science, Division of Basic Medical Science and Molecular Medicine, Tokai University School of Medicine, 143 Shimokasuya, Isehara, Kanagawa, 259-1193, Japan.

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http://dx.doi.org/10.1007/s11248-011-9505-yDOI Listing
February 2012

Genome-wide association study to identify genetic variants present in Japanese patients harboring intracranial aneurysms.

J Hum Genet 2010 Oct 8;55(10):656-61. Epub 2010 Jul 8.

Department of Molecular Life Sciences, Basic Medical Science and Molecular Medicine, Tokai University School of Medicine, Kanagawa, Japan.

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http://dx.doi.org/10.1038/jhg.2010.82DOI Listing
October 2010

TRIM39 and RNF39 are associated with Behçet's disease independently of HLA-B∗51 and -A∗26.

Biochem Biophys Res Commun 2010 Oct 27;401(4):533-7. Epub 2010 Sep 27.

Department of Molecular Life Science, Tokai University School of Medicine, Isehara, Kanagawa 259-1143, Japan.

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http://dx.doi.org/10.1016/j.bbrc.2010.09.088DOI Listing
October 2010

Differential effects of chromosome 9p21 variation on subphenotypes of intracranial aneurysm: site distribution.

Stroke 2010 Aug 1;41(8):1593-8. Epub 2010 Jul 1.

Division of Molecular Life Science, School of Medicine, Tokai University, Isehara, Kanagawa, Japan.

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http://dx.doi.org/10.1161/STROKEAHA.110.586529DOI Listing
August 2010

[Genome informatics].

Nihon Rinsho 2010 Aug;68 Suppl 8:93-9

Division of Molecular Life Science, School of Medicine, Tokai University.

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August 2010

Meta-analysis of genetic association studies: methodologies, between-study heterogeneity and winner's curse.

J Hum Genet 2009 Nov 23;54(11):615-23. Epub 2009 Oct 23.

Division of Molecular Life Science, School of Medicine, Tokai University, Isehara, Kanagawa, Japan.

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http://dx.doi.org/10.1038/jhg.2009.95DOI Listing
November 2009