Publications by authors named "Herve Seitz"

39Publications

Mechanistic analysis of the enhanced RNAi activity by 6-mCEPh-purine at the 5' end of the siRNA guide strand.

RNA 2020 Nov 11. Epub 2020 Nov 11.

Institute for Quantitative Biosciences, The University of Tokyo;

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http://dx.doi.org/10.1261/rna.073775.119DOI Listing
November 2020

Prospects and challenges of multi-omics data integration in toxicology.

Arch Toxicol 2020 02 8;94(2):371-388. Epub 2020 Feb 8.

Helmholtz Centre for Environmental Research - UFZ, 04318, Leipzig, Germany.

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http://dx.doi.org/10.1007/s00204-020-02656-yDOI Listing
February 2020

Inconsistencies and Limitations of Current MicroRNA Target Identification Methods.

Methods Mol Biol 2019 ;1970:291-314

IGH (CNRS and University of Montpellier), Montpellier, France.

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http://dx.doi.org/10.1007/978-1-4939-9207-2_16DOI Listing
September 2019

Editorial: miRNA Regulatory Pathways in Metazoans. Advances From and Studies.

Front Genet 2019 4;10:147. Epub 2019 Mar 4.

Institut de Génétique Humaine, UMR 9002 CNRS and Université de Montpellier, Montpellier, France.

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http://dx.doi.org/10.3389/fgene.2019.00147DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409324PMC
March 2019

On the Number of Functional microRNA Targets.

Authors:
Hervé Seitz

Mol Biol Evol 2019 07;36(7):1596-1597

IGH, CNRS-University of Montpellier, Montpellier, France.

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http://dx.doi.org/10.1093/molbev/msz054DOI Listing
July 2019

Functional lability of RNA-dependent RNA polymerases in animals.

PLoS Genet 2019 02 19;15(2):e1007915. Epub 2019 Feb 19.

Institut de Génétique Humaine, UMR 9002 CNRS and université de Montpellier, 141, rue de la Cardonille, 34396 Montpellier CEDEX 5, France.

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http://dx.plos.org/10.1371/journal.pgen.1007915
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http://dx.doi.org/10.1371/journal.pgen.1007915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6396948PMC
February 2019

Issues in current microRNA target identification methods.

Authors:
Hervé Seitz

RNA Biol 2017 07 21;14(7):831-834. Epub 2017 Apr 21.

a Institut de Génétique Humaine UMR 9002 CNRS-Université de Montpellier , 141, rue de la Cardonille, 34396 Montpellier CEDEX 5 , France.

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http://dx.doi.org/10.1080/15476286.2017.1320469DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5546714PMC
July 2017

microRNA target prediction programs predict many false positives.

Genome Res 2017 02 15;27(2):234-245. Epub 2016 Nov 15.

Institut de Génétique Humaine, CNRS UPR 1142, 34396 Montpellier, France.

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http://dx.doi.org/10.1101/gr.205146.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5287229PMC
February 2017

The gastrula transition reorganizes replication-origin selection in Caenorhabditis elegans.

Nat Struct Mol Biol 2017 03 23;24(3):290-299. Epub 2017 Jan 23.

Institute of Human Genetics, CNRS, Montpellier, France.

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http://dx.doi.org/10.1038/nsmb.3363DOI Listing
March 2017

Silencing of X-Linked MicroRNAs by Meiotic Sex Chromosome Inactivation.

PLoS Genet 2015 Oct 28;11(10):e1005461. Epub 2015 Oct 28.

The Francis Crick Institute, Mill Hill Laboratory, London, United Kingdom.

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http://dx.doi.org/10.1371/journal.pgen.1005461DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4624941PMC
October 2015

microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus.

Nucleic Acids Res 2015 Jul 22;43(13):6384-98. Epub 2015 Jun 22.

Sorbonne Université, UPMC Univ Paris 06, CNRS, Algal Genetics Group, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff, CS 90074, F-29688 Roscoff, France

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http://dx.doi.org/10.1093/nar/gkv578DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4513859PMC
July 2015

Insect small non-coding RNA involved in epigenetic regulations.

Curr Opin Insect Sci 2014 Jul 10;1:1-9. Epub 2014 May 10.

Institut de Génétique Humaine, Centre National de la Recherche Scientifique (CNRS), UPR 1142, 141, rue de la Cardonille, 34396 Montpellier Cedex 5, France. Electronic address:

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http://dx.doi.org/10.1016/j.cois.2014.05.001DOI Listing
July 2014

Cnidarian microRNAs frequently regulate targets by cleavage.

Genome Res 2014 Apr 18;24(4):651-63. Epub 2014 Mar 18.

Department for Molecular Evolution and Development, Center for Organismal Systems Biology, Faculty of Life Sciences, University of Vienna, 1090 Vienna, Austria;

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http://dx.doi.org/10.1101/gr.162503.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3975064PMC
April 2014

Recognition of the pre-miRNA structure by Drosophila Dicer-1.

Nat Struct Mol Biol 2011 Sep 18;18(10):1153-8. Epub 2011 Sep 18.

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.

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http://dx.doi.org/10.1038/nsmb.2125DOI Listing
September 2011

A 5'-uridine amplifies miRNA/miRNA* asymmetry in Drosophila by promoting RNA-induced silencing complex formation.

Silence 2011 Jun 7;2. Epub 2011 Jun 7.

Laboratoire de Biologie Moléculaire Eucaryote, 118 route de Narbonne, Université Toulouse III Paul Sabatier (UPS), F-31000 Toulouse, France.

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http://dx.doi.org/10.1186/1758-907X-2-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3127740PMC
June 2011

siRNAs: the hidden face of the small RNA world.

Authors:
Hervé Seitz

Curr Biol 2010 Feb;20(3):R108-10

Université de Toulouse, UPS, Laboratoire de Biologie Moléculaire Eucaryote, F-31000, France.

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http://dx.doi.org/10.1016/j.cub.2009.12.027DOI Listing
February 2010

Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway.

RNA 2010 Jan 16;16(1):43-56. Epub 2009 Nov 16.

Howard Hughes Medical Institute, Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School,Worcester, Massachusetts 01605, USA.

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http://dx.doi.org/10.1261/rna.1972910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2802036PMC
January 2010

Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Nat Struct Mol Biol 2009 Sep 16;16(9):953-60. Epub 2009 Aug 16.

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Japan.

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http://dx.doi.org/10.1038/nsmb.1630DOI Listing
September 2009

Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies.

Cell 2009 May 23;137(3):509-21. Epub 2009 Apr 23.

Department of Biochemistry and Molecular Pharmacology and Howard Hughes Medical Institute, University of Massachusetts Medical School, Worcester, 01605, USA.

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http://dx.doi.org/10.1016/j.cell.2009.04.027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2768572PMC
May 2009

Redefining microRNA targets.

Authors:
Hervé Seitz

Curr Biol 2009 May 16;19(10):870-3. Epub 2009 Apr 16.

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation Street, Worcester, MA 01605, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S096098220900913
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http://dx.doi.org/10.1016/j.cub.2009.03.059DOI Listing
May 2009

Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells.

Science 2008 May 10;320(5879):1077-81. Epub 2008 Apr 10.

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.

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http://www.sciencemag.org/cgi/doi/10.1126/science.1157396
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http://dx.doi.org/10.1126/science.1157396DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2953241PMC
May 2008

Argonaute loading improves the 5' precision of both MicroRNAs and their miRNA* strands in flies.

Curr Biol 2008 Jan;18(2):147-51

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, Massachusetts 01605, USA.

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http://dx.doi.org/10.1016/j.cub.2007.12.049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2854039PMC
January 2008

Differential regulation of imprinting in the murine embryo and placenta by the Dlk1-Dio3 imprinting control region.

Development 2007 Jan 13;134(2):417-26. Epub 2006 Dec 13.

Department of Physiology, Development and Neuroscience, University of Cambridge, Anatomy Building, Downing Street, Cambridge CB2 3DY, UK.

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http://dx.doi.org/10.1242/dev.02726DOI Listing
January 2007

A distinct small RNA pathway silences selfish genetic elements in the germline.

Science 2006 Jul 29;313(5785):320-4. Epub 2006 Jun 29.

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA.

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http://dx.doi.org/10.1126/science.1129333DOI Listing
July 2006

Rethinking the microprocessor.

Cell 2006 Jun;125(5):827-9

Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01532, USA.

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http://dx.doi.org/10.1016/j.cell.2006.05.018DOI Listing
June 2006

Imprinted small RNA genes.

Biol Chem 2004 Oct;385(10):905-11

Laboratoire de Biologie Moléculaire des Eucaryotes du CNRS, Institut d'Exploration Fonctionnelle des Génomes, 118 route de Narbonne, F-31062 Toulouse Cedex 4, France.

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https://www.degruyter.com/view/j/bchm.2004.385.issue-10/bc.2
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http://dx.doi.org/10.1515/BC.2004.118DOI Listing
October 2004

A large imprinted microRNA gene cluster at the mouse Dlk1-Gtl2 domain.

Genome Res 2004 Sep 12;14(9):1741-8. Epub 2004 Aug 12.

LBME-CNRS (UMR 5099), IFR-109, Université P. Sabatier, 31062 Toulouse, France.

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http://dx.doi.org/10.1101/gr.2743304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC515320PMC
September 2004

Identification of 13 novel human modification guide RNAs.

Nucleic Acids Res 2003 Nov;31(22):6543-51

Institute for Molecular Biology, Department of Functional Genomics, University of Innsbruck, Peter-Mayr-Strasse 4b, 6020 Innsbruck, Austria.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC275545PMC
http://dx.doi.org/10.1093/nar/gkg849DOI Listing
November 2003

Asymmetric regulation of imprinting on the maternal and paternal chromosomes at the Dlk1-Gtl2 imprinted cluster on mouse chromosome 12.

Nat Genet 2003 Sep 24;35(1):97-102. Epub 2003 Aug 24.

Department of Anatomy, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK.

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http://dx.doi.org/10.1038/ng1233DOI Listing
September 2003

Imprinted microRNA genes transcribed antisense to a reciprocally imprinted retrotransposon-like gene.

Nat Genet 2003 Jul;34(3):261-2

LBME, Centre National de la Recherche Scientifique, UMR 5099, IFR 109, Université P. Sabatier, 118 route de Narbonne, 31062 Toulouse Cedex, France.

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http://dx.doi.org/10.1038/ng1171DOI Listing
July 2003

Identification of tandemly-repeated C/D snoRNA genes at the imprinted human 14q32 domain reminiscent of those at the Prader-Willi/Angelman syndrome region.

Hum Mol Genet 2002 Jun;11(13):1527-38

LBME-CNRS (UMR5099), Université P. Sabatier, 118 Route de Narbonne, 31062 Toulouse Cedex, France.

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http://dx.doi.org/10.1093/hmg/11.13.1527DOI Listing
June 2002