Helmut Blum

Helmut Blum

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Helmut Blum

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The protective effect of betacellulin against acute pancreatitis is ERBB4 dependent.

J Gastroenterol 2020 Mar 27;55(3):317-329. Epub 2019 Aug 27.

Institute of Molecular Animal Breeding and Biotechnology, Gene Center of the LMU Munich, Feodor-Lynen-Str. 25, 81377, Munich, Germany.

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http://dx.doi.org/10.1007/s00535-019-01613-6DOI Listing
March 2020

Shedding of Mycobacterium caprae by wild red deer (Cervus elaphus) in the Bavarian alpine regions, Germany.

Transbound Emerg Dis 2020 Jan 26;67(1):308-317. Epub 2019 Sep 26.

Chair of Food Safety, Faculty of Veterinary Medicine, LMU Munich, Oberschleissheim, Germany.

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http://dx.doi.org/10.1111/tbed.13353DOI Listing
January 2020

Absolute nucleosome occupancy map for the genome.

Genome Res 2019 12 6;29(12):1996-2009. Epub 2019 Nov 6.

Molecular Biology Division, Biomedical Center, Faculty of Medicine, Ludwig-Maximilians-Universität München, 82152 Planegg-Martinsried, Germany.

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http://dx.doi.org/10.1101/gr.253419.119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6886505PMC
December 2019

Sex-specific programming effects of parental obesity in pre-implantation embryonic development.

Int J Obes (Lond) 2019 Nov 27. Epub 2019 Nov 27.

Institute of Molecular Animal Breeding and Biotechnology, Gene Center, Ludwig-Maximilians-Universität München, Feodor-Lynen-Strasse 25, 81377, Munich, Germany.

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http://dx.doi.org/10.1038/s41366-019-0494-xDOI Listing
November 2019

Multi-omics insights into functional alterations of the liver in insulin-deficient diabetes mellitus.

Mol Metab 2019 08 4;26:30-44. Epub 2019 Jun 4.

Laboratory for Functional Genome Analysis (LAFUGA), Gene Center, LMU Munich, 81377 Munich, Germany; German Center for Diabetes Research (DZD), 85764 Neuherberg, Germany; Chair for Molecular Animal Breeding and Biotechnology, Gene Center and Department of Veterinary Sciences, LMU Munich, 81377 Munich, Germany; Center for Innovative Medical Models (CiMM), LMU Munich, 85764 Oberschleißheim, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.molmet.2019.05.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6667734PMC
August 2019

The myelin protein PMP2 is regulated by SOX10 and drives melanoma cell invasion.

Pigment Cell Melanoma Res 2019 05 21;32(3):424-434. Epub 2018 Dec 21.

Department of Dermatology and Allergy, University Hospital, LMU Munich, Munich, Germany.

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http://dx.doi.org/10.1111/pcmr.12760DOI Listing
May 2019

Antigen-Specific TCR Signatures of Cytomegalovirus Infection.

J Immunol 2019 02 26;202(3):979-990. Epub 2018 Dec 26.

German Center for Infection Research Group Host Control of Viral Latency and Reactivation, Research Unit Gene Vectors, Helmholtz Center Munich, 81377 Munich, Germany;

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http://dx.doi.org/10.4049/jimmunol.1801401DOI Listing
February 2019

Genome-wide measurement of local nucleosome array regularity and spacing by nanopore sequencing.

Nat Struct Mol Biol 2018 09 20;25(9):894-901. Epub 2018 Aug 20.

Molecular Biology Division, Biomedical Center, Faculty of Medicine, Ludwig-Maximilians-Universität , Munich, Germany.

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http://www.nature.com/articles/s41594-018-0110-0
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http://dx.doi.org/10.1038/s41594-018-0110-0DOI Listing
September 2018

Correction to: DamID profiling of dynamic Polycomb-binding sites in Drosophila imaginal disc development and tumorigenesis.

Epigenetics Chromatin 2018 07 3;11(1):38. Epub 2018 Jul 3.

Faculty of Biology, Ludwig-Maximilians-University Munich, Grosshaderner Strasse 2-4, 82152, Planegg, Martinsried, Germany.

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http://dx.doi.org/10.1186/s13072-018-0206-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6029416PMC
July 2018

Comparative genomics and the nature of placozoan species.

PLoS Biol 2018 07 31;16(7):e2005359. Epub 2018 Jul 31.

Department of Earth and Environmental Sciences, Paleontology and Geobiology, Ludwig-Maximilians-Universität München, Munich, Germany.

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https://dx.plos.org/10.1371/journal.pbio.2005359
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http://dx.doi.org/10.1371/journal.pbio.2005359DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6067683PMC
July 2018

DamID profiling of dynamic Polycomb-binding sites in Drosophila imaginal disc development and tumorigenesis.

Epigenetics Chromatin 2018 06 5;11(1):27. Epub 2018 Jun 5.

Faculty of Biology, Ludwig-Maximilians-University Munich, Grosshaderner Strasse 2-4, 82152, Planegg, Martinsried, Germany.

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http://dx.doi.org/10.1186/s13072-018-0196-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5987561PMC
June 2018

OCT4/POU5F1 is required for NANOG expression in bovine blastocysts.

Proc Natl Acad Sci U S A 2018 03 26;115(11):2770-2775. Epub 2018 Feb 26.

Chair for Molecular Animal Breeding and Biotechnology, Gene Center, Ludwig-Maximilians-Universität München, 81377 Munich, Germany;

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http://dx.doi.org/10.1073/pnas.1718833115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5856541PMC
March 2018

Effect of metabolic status on conceptus-maternal interactions on day 19 in dairy cattle: II. Effects on the endometrial transcriptome.

Biol Reprod 2017 Sep;97(3):413-425

Division of Reproduction and Early Development, Faculty of Medicine and Health Sciences, University of Leeds, UK.

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http://dx.doi.org/10.1093/biolre/iox095DOI Listing
September 2017

The Munich MIDY Pig Biobank - A unique resource for studying organ crosstalk in diabetes.

Mol Metab 2017 08 13;6(8):931-940. Epub 2017 Jun 13.

Chair for Molecular Animal Breeding and Biotechnology, Gene Center and Department of Veterinary Sciences, and Center for Innovative Medical Models (CiMM), LMU Munich, Feodor-Lynen-Str. 25, D-81377 Munich, Germany; German Center for Diabetes Research (DZD), Ingolstädter Landstr. 1, D-85764 Neuherberg, Germany; Laboratory for Functional Genome Analysis (LAFUGA), Gene Center, LMU Munich, Feodor-Lynen-Str. 25, D-81377 Munich, Germany. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22128778173031
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http://dx.doi.org/10.1016/j.molmet.2017.06.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518720PMC
August 2017

Splicing stimulates siRNA formation at Drosophila DNA double-strand breaks.

PLoS Genet 2017 Jun 19;13(6):e1006861. Epub 2017 Jun 19.

Gene Center and Dept. of Biochemistry, Ludwig-Maximilians-Universität München, München, Germany.

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http://dx.doi.org/10.1371/journal.pgen.1006861DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5495518PMC
June 2017

Transcriptome analysis of dominant-negative Brd4 mutants identifies Brd4-specific target genes of small molecule inhibitor JQ1.

Sci Rep 2017 05 10;7(1):1684. Epub 2017 May 10.

Department of Molecular Epigenetics, Helmholtz Center Munich and Center for Integrated Protein Science Munich (CIPSM), Marchioninistrasse 25, 81377, Munich, Germany.

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http://dx.doi.org/10.1038/s41598-017-01943-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5431861PMC
May 2017

TT-seq captures enhancer landscapes immediately after T-cell stimulation.

Mol Syst Biol 2017 03 7;13(3):920. Epub 2017 Mar 7.

Department of Molecular Biology, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371733PMC
http://dx.doi.org/10.15252/msb.20167507DOI Listing
March 2017

Recurrent evolution of host and vector association in bacteria of the Borrelia burgdorferi sensu lato species complex.

BMC Genomics 2016 09 15;17(1):734. Epub 2016 Sep 15.

National Reference Centre for Borrelia at the Bavarian Health and Food Safety Authority, Veterinärstr. 2, 85764, Oberschleissheim, Germany.

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http://dx.doi.org/10.1186/s12864-016-3016-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5025617PMC
September 2016

Close correlation of copy number aberrations detected by next-generation sequencing with results from routine cytogenetics in acute myeloid leukemia.

Genes Chromosomes Cancer 2016 07 2;55(7):553-67. Epub 2016 May 2.

Experimental Leukemia and Lymphoma Research (ELLF), Department of Internal Medicine III, University Hospital of the Ludwig-Maximilians-Universität (LMU) München, Munich, Germany.

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http://dx.doi.org/10.1002/gcc.22359DOI Listing
July 2016

Young woman with mild bone marrow dysplasia, GATA2 and ASXL1 mutation treated with allogeneic hematopoietic stem cell transplantation.

Leuk Res Rep 2015 17;4(2):72-5. Epub 2015 Oct 17.

Department of Hematology and Vascular Disorders, Skåne University Hospital, 22185 Lund, Sweden ; Department of Molecular Medicine and Gene Therapy, Sölvegatan 17, BMC A12, Lund University, 22184 Lund, Sweden.

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http://dx.doi.org/10.1016/j.lrr.2015.10.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4672090PMC
December 2015

Comparing effects of perfusion and hydrostatic pressure on gene profiles of human chondrocyte.

J Biotechnol 2015 Sep 29;210:59-65. Epub 2015 Jun 29.

Department of Orthopaedic Surgery, Physical Medicine and Rehabilitation, Campus Großhadern, Ludwig-Maximilians-University, Marchioninistr. 15, 81377 Munich, Germany.

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http://dx.doi.org/10.1016/j.jbiotec.2015.06.409DOI Listing
September 2015

Parapoxvirus (PPV) of red deer reveals subclinical infection and confirms a unique species.

J Gen Virol 2015 Jun 20;96(Pt 6):1446-1462. Epub 2015 Feb 20.

Bavarian Health and Food Safety Authority, Oberschleißheim, Germany.

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http://dx.doi.org/10.1099/vir.0.000080DOI Listing
June 2015

NGS population genetics analyses reveal divergent evolution of a Lyme Borreliosis agent in Europe and Asia.

Ticks Tick Borne Dis 2015 Apr 10;6(3):344-51. Epub 2015 Mar 10.

LMU Munich, Department Biology II, Großhaderner Str. 2, 82152 Munich, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ttbdis.2015.02.008DOI Listing
April 2015

Next generation sequencing analysis of nine Corynebacterium ulcerans isolates reveals zoonotic transmission and a novel putative diphtheria toxin-encoding pathogenicity island.

Genome Med 2014 28;6(11):113. Epub 2014 Nov 28.

LGL, Bavarian Health and Food Safety Authority, Oberschleißheim, 85764 Germany ; National Consiliary Laboratory on Diphtheria, Oberschleißheim, 85764 Germany.

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http://dx.doi.org/10.1186/s13073-014-0113-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4293111PMC
January 2015

Oxyphil cell metaplasia in the parathyroids is characterized by somatic mitochondrial DNA mutations in NADH dehydrogenase genes and cytochrome c oxidase activity-impairing genes.

Am J Pathol 2014 Nov;184(11):2922-35

Institute for Pathology of the Ludwig-Maximilians-Universität München, Munich, Germany; German Cancer Consortium and German Cancer Research Center, Heidelberg, Germany. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00029440140043
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http://dx.doi.org/10.1016/j.ajpath.2014.07.015DOI Listing
November 2014

Genome activation in bovine embryos: review of the literature and new insights from RNA sequencing experiments.

Anim Reprod Sci 2014 Sep 6;149(1-2):46-58. Epub 2014 Jun 6.

Laboratory for Functional Genome Analysis (LAFUGA), Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany; Graduate School of Quantitative Biosciences (QBM), Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany; Chair for Molecular Animal Breeding and Biotechnology, Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.anireprosci.2014.05.016DOI Listing
September 2014

Isolated trisomy 13 defines a homogeneous AML subgroup with high frequency of mutations in spliceosome genes and poor prognosis.

Blood 2014 Aug 12;124(8):1304-11. Epub 2014 Jun 12.

Department of Internal Medicine 3, University Hospital Grosshadern, Ludwig-Maximilians-Universität, Munich, Germany; Clinical Cooperative Group Leukemia, Helmholtz Zentrum München, German Research Center for Environmental Health, Munich, Germany; German Cancer Consortium (DKTK), Heidelberg, Germany; German Cancer Research Center (DKFZ), Heidelberg, Germany;

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http://dx.doi.org/10.1182/blood-2013-12-540716DOI Listing
August 2014

Uniformity of nucleosome preservation pattern in Mammalian sperm and its connection to repetitive DNA elements.

Dev Cell 2014 Jul 3;30(1):23-35. Epub 2014 Jul 3.

Clinic and Polyclinic of Urology, Pediatric Urology and Andrology, Department of Molecular Andrology, Justus Liebig University Giessen, 35392 Giessen, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2014.05.023DOI Listing
July 2014

The stem cell factor SOX2 regulates the tumorigenic potential in human gastric cancer cells.

Carcinogenesis 2014 Apr 9;35(4):942-50. Epub 2013 Dec 9.

Institut für Medizinische Mikrobiologie, Immunologie und Hygiene, Technische Universität München, 81675 Munich, Germany.

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http://dx.doi.org/10.1093/carcin/bgt410DOI Listing
April 2014

Hypoxia-independent gene expression mediated by SOX9 promotes aggressive pancreatic tumor biology.

Mol Cancer Res 2014 Mar 3;12(3):421-32. Epub 2013 Dec 3.

Klinikum Großhadern, VH02 426, Marchioninistr. 15, 81377 München, Germany.

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http://dx.doi.org/10.1158/1541-7786.MCR-13-0351DOI Listing
March 2014

Comparative and retrospective molecular analysis of Parapoxvirus (PPV) isolates.

Virus Res 2014 Mar 27;181:11-21. Epub 2013 Dec 27.

Bavarian Health and Food Safety Authority, Oberschleissheim, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.virusres.2013.12.015DOI Listing
March 2014

Fine mapping of genome activation in bovine embryos by RNA sequencing.

Proc Natl Acad Sci U S A 2014 Mar 3;111(11):4139-44. Epub 2014 Mar 3.

Laboratory for Functional Genome Analysis, Chair for Molecular Animal Breeding and Biotechnology, and Department of Biochemistry, Center for Integrated Protein Science, Gene Center, Ludwig-Maximilians-Universität München, 81377 Munich, Germany.

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http://dx.doi.org/10.1073/pnas.1321569111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964062PMC
March 2014

Comprehensive analysis of β-catenin target genes in colorectal carcinoma cell lines with deregulated Wnt/β-catenin signaling.

BMC Genomics 2014 Jan 28;15:74. Epub 2014 Jan 28.

Department of Medicine II, University of Munich, Marchioninistrasse 15, 81377 Munich, Germany.

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http://dx.doi.org/10.1186/1471-2164-15-74DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3909937PMC
January 2014

A Comprehensive Gene Expression Analysis of Resistance Formation upon Metronomic Cyclophosphamide Therapy.

Transl Oncol 2013 Feb 1;6(1):1-9. Epub 2013 Feb 1.

Pharmaceutical Biotechnology, Department of Pharmacy, Center for System-Based Drug Research, Ludwig-Maximilians University, Munich, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3573648PMC
http://dx.doi.org/10.1593/tlo.12295DOI Listing
February 2013

LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation.

Cell 2013 Jan;152(3):584-98

Department of Biology II, Center for Integrated Protein Science Munich (CIPSM), Ludwig-Maximilians University Munich, Grosshadernerstrasse 2, 82152 Planegg-Martinsried, Germany.

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http://dx.doi.org/10.1016/j.cell.2013.01.009DOI Listing
January 2013

Changing metabolic signatures of amino acids and lipids during the prediabetic period in a pig model with impaired incretin function and reduced β-cell mass.

Diabetes 2012 Aug 9;61(8):2166-75. Epub 2012 Apr 9.

Chair for Molecular Animal Breeding and Biotechnology, and Laboratory for Functional Genome Analysis, Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany.

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http://dx.doi.org/10.2337/db11-1133DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3402307PMC
August 2012

Gene expression profiling of bovine peripartal placentomes: detection of molecular pathways potentially involved in the release of foetal membranes.

Reproduction 2012 Jan 26;143(1):85-105. Epub 2011 Oct 26.

Clinic for Ruminants with Ambulatory and Herd Health Services, Centre for Clinical Veterinary Medicine, LMU Munich, Oberschleißheim, Germany.

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https://rep.bioscientifica.com/view/journals/rep/143/1/85.xm
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http://dx.doi.org/10.1530/REP-11-0204DOI Listing
January 2012

Actions and interactions of progesterone and estrogen on transcriptome profiles of the bovine endometrium.

Physiol Genomics 2010 Nov 28;42A(4):290-300. Epub 2010 Sep 28.

Graduate School of Animal and Food Hygiene, Obihiro University of Agriculture and Veterinary Medicine, Obihiro, Japan.

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http://dx.doi.org/10.1152/physiolgenomics.00107.2010DOI Listing
November 2010

Differential endometrial gene expression in pregnant and nonpregnant sows.

Biol Reprod 2010 Aug 14;83(2):277-85. Epub 2010 Apr 14.

Department of Basic Animal and Veterinary Sciences, Faculty of Life Sciences, University of Copenhagen, Frederiksberg, Denmark.

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https://academic.oup.com/biolreprod/article-lookup/doi/10.10
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http://dx.doi.org/10.1095/biolreprod.109.082321DOI Listing
August 2010

Escherichia coli infection induces distinct local and systemic transcriptome responses in the mammary gland.

BMC Genomics 2010 Feb 25;11:138. Epub 2010 Feb 25.

Laboratory for Functional Genome Analysis (LAFUGA), Gene Center, LMU Munich, Feodor-Lynen-Str 25, 81377 Munich, Germany.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-11-138DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2846913PMC
February 2010

EFEMP1 binds the EGF receptor and activates MAPK and Akt pathways in pancreatic carcinoma cells.

Biol Chem 2009 Dec;390(12):1293-302

Department of Surgery, Munich University Medical Center, Campus Grosshadern, Marchioninistr. 15, D-81377 Munich, Germany.

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http://dx.doi.org/10.1515/BC.2009.140DOI Listing
December 2009

Dickkopf-4 is frequently down-regulated and inhibits growth of colorectal cancer cells.

Cancer Lett 2009 Apr 6;276(2):152-9. Epub 2008 Dec 6.

Department of Medicine II, Klinikum Grosshadern, University of Munich, Marchioninistrasse 15, Munich, Germany.

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http://dx.doi.org/10.1016/j.canlet.2008.11.003DOI Listing
April 2009

A simple and loss-free method to remove TRIzol contaminations from minute RNA samples.

Anal Biochem 2009 Apr 25;387(1):136-8. Epub 2008 Dec 25.

Laboratory for Functional Genome Analysis, Gene Center of the Ludwig Maximilian University, Munich, Germany.

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http://dx.doi.org/10.1016/j.ab.2008.12.020DOI Listing
April 2009

The endometrium responds differently to cloned versus fertilized embryos.

Proc Natl Acad Sci U S A 2009 Apr 23;106(14):5681-6. Epub 2009 Mar 23.

Molecular Animal Breeding and Biotechnology, and Laboratory for Functional Genome Analysis, Gene Center, Ludwig-Maximilians-Universität München, 81377 Munich, Germany.

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http://dx.doi.org/10.1073/pnas.0811841106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2666995PMC
April 2009

EFEMP1 expression promotes in vivo tumor growth in human pancreatic adenocarcinoma.

Mol Cancer Res 2009 Feb 10;7(2):189-98. Epub 2009 Feb 10.

Munich University Medical Center, Department of Surgery, Munich, Germany.

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http://dx.doi.org/10.1158/1541-7786.MCR-08-0132DOI Listing
February 2009

Dynamic changes in messenger RNA profiles of bovine endometrium during the oestrous cycle.

Reproduction 2008 Feb;135(2):225-40

Institute of Molecular Animal Breeding and Biotechnology, LMU Munich, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.

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http://dx.doi.org/10.1530/REP-07-0415DOI Listing
February 2008

Embryo-induced transcriptome changes in bovine endometrium reveal species-specific and common molecular markers of uterine receptivity.

Reproduction 2006 Aug;132(2):319-31

Institute of Molecular Animal Breeding and Biotechnology, Ludwig-Maximilians University, Feodor-Lynen-Str. 25, 81377 Munich, Germany.

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http://dx.doi.org/10.1530/rep.1.00996DOI Listing
August 2006

[Methods for transcriptome and proteome research: applications for studying the biology of reproduction in cattle].

Berl Munch Tierarztl Wochenschr 2006 Jan-Feb;119(1-2):7-16

Lehrstuhl für MolekulareTierzucht und Biotechnologie, Ludwig-Maximilians-Universität München.

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June 2006

Purification of His-tagged hybrid phage antibody.

Anal Biochem 2006 May 13;352(1):154-6. Epub 2006 Jan 13.

Laboratory for Molecular Haematology, Department of Haematology and Oncology, Klinikum der Universitat Munchen, Medizinische Klinik-Innenstadt, 80336 Munich, Germany.

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http://dx.doi.org/10.1016/j.ab.2005.12.020DOI Listing
May 2006