Hatice Gulcin Ozer

Hatice Gulcin Ozer

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Hatice Gulcin Ozer

Hatice Gulcin Ozer

Publications by authors named "Hatice Gulcin Ozer"

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20Publications

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Whole-exome tumor sequencing study in biliary cancer patients with a response to MEK inhibitors.

Oncotarget 2016 Feb;7(5):5306-12

Department of Internal Medicine, Divison of Medical Oncology, Ohio State University Comprehensive Cancer Center, Columbus, OH, USA.

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http://dx.doi.org/10.18632/oncotarget.6632DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4868687PMC
February 2016

Characterization of CLL exosomes reveals a distinct microRNA signature and enhanced secretion by activation of BCR signaling.

Blood 2015 May 1;125(21):3297-305. Epub 2015 Apr 1.

Division of Hematology, Department of Internal Medicine, Division of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, The Ohio State University, Columbus, OH.

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http://dx.doi.org/10.1182/blood-2014-12-618470DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4440883PMC
May 2015

Identification of medium-sized copy number alterations in whole-genome sequencing.

Cancer Inform 2014 5;13(Suppl 3):105-11. Epub 2015 Mar 5.

Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA.

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http://dx.doi.org/10.4137/CIN.S14023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4356486PMC
March 2015

Resistance mechanisms for the Bruton's tyrosine kinase inhibitor ibrutinib.

N Engl J Med 2014 Jun 28;370(24):2286-94. Epub 2014 May 28.

From the Division of Hematology, Department of Internal Medicine (J.A.W., T.-M.L., A.S.R., S.M.J., K.A.B., A.L., A.J.J., J.C. Byrd), the Department of Biomedical Informatics (H.G.O., A.S.Y.), and the Department of Pathology (G.L.), Ohio State University, Columbus; the Department of Medicine, Division of Hematology-Oncology, Weill Cornell Medical College, New York (R.R.F.); the Division of Molecular Genetics, German Cancer Research Center, Heidelberg (M.Z., P.L.), and the Department of Internal Medicine III, University of Ulm, Ulm (S.S.) - both in Germany; Pharmacyclics, Sunnyvale, CA (L.X., D.H.-H.L., S.M.S., D.F.J., J.J.B., B.Y.C.); the Duke Cancer Institute, Duke University, Durham, NC (S.S.D., J.Z.); the Division of Hematology-Oncology, Department of Medicine, Hofstra North Shore-LIJ School of Medicine, New Hyde Park, NY (J.C. Barrientos); and Janssen Research and Development, Beerse, Belgium (M.V.).

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http://dx.doi.org/10.1056/NEJMoa1400029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4144824PMC
June 2014

Intensive care unit versus non-intensive care unit postoperative management of head and neck free flaps: comparative effectiveness and cost comparisons.

Head Neck 2014 Apr 18;36(4):536-9. Epub 2013 Jun 18.

Department of Head and Neck Surgery/Plastic and Reconstructive Surgery, Roswell Park Cancer Institute, Buffalo, New York.

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http://dx.doi.org/10.1002/hed.23325DOI Listing
April 2014

DFI: gene feature discovery in RNA-seq experiments from multiple sources.

BMC Genomics 2012 17;13 Suppl 8:S11. Epub 2012 Dec 17.

The Department of Biomedical Informatics and The Ohio State University Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210, USA.

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http://dx.doi.org/10.1186/1471-2164-13-S8-S11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3535702PMC
June 2013

Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes.

Nucleic Acids Res 2012 Nov 31;40(20):10172-86. Epub 2012 Aug 31.

The Department of Biomedical Informatics and the Ohio State University Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210, USA.

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http://dx.doi.org/10.1093/nar/gks819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488252PMC
November 2012

From sequencer to supercomputer: an automatic pipeline for managing and processing next generation sequencing data.

AMIA Jt Summits Transl Sci Proc 2012 19;2012:1-10. Epub 2012 Mar 19.

Department of Biomedical Informatics, The Ohio State University, Columbus, Ohio, USA;

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3392054PMC
August 2012

miRNA profiling for biomarker discovery in multiple sclerosis: from microarray to deep sequencing.

J Neuroimmunol 2012 Jul 9;248(1-2):32-9. Epub 2011 Nov 9.

Neurology Department, The Ohio State University Medical Center, 460 W 12th Ave Room 0705, Columbus, OH 43210, USA.

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http://dx.doi.org/10.1016/j.jneuroim.2011.10.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3288464PMC
July 2012

Comparing multiple ChIP-sequencing experiments.

J Bioinform Comput Biol 2011 Apr;9(2):269-82

Department of Biomedical Informatics, The Ohio State University , Columbus, OH, 43210, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289603PMC
April 2011

Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia.

BMC Bioinformatics 2010 Oct 28;11 Suppl 9:S5. Epub 2010 Oct 28.

Department of Biomedical Informatics, The Ohio State University, OH, USA.

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http://dx.doi.org/10.1186/1471-2105-11-S9-S5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2967746PMC
October 2010

MAVL/StickWRLD: analyzing structural constraints using interpositional dependencies in biomolecular sequence alignments.

Nucleic Acids Res 2006 Jul;34(Web Server issue):W133-6

Biophysics Graduate Program, The Ohio State University, 700 Children's Drive, Columbus, OH 43205, USA.

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http://dx.doi.org/10.1093/nar/gkl251DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538782PMC
July 2006