Publications by authors named "Harsha V Doddapaneni"

8Publications

Next Generation Sequencing of 134 Children with Autism Spectrum Disorder and Regression.

Authors:
Jiani Yin Chun-An Chun Nikolay N Zavadenko Natalia L Pechatnikova Oxana Yu Naumova Harsha V Doddapaneni Jianhong Hu Donna M Muzny Christian P Schaaf Elena L Grigorenko

Genes (Basel) 2020 Jul 25;11(8). Epub 2020 Jul 25.

Molecular and Human Genetics Department, Baylor College of Medicine, Houston, TX 77030, USA.

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July 2020

Elucidating the molecular pathogenesis of glioma: integrated germline and somatic profiling of a familial glioma case series.

Authors:
Daniel I Jacobs Kazutaka Fukumura Matthew N Bainbridge Georgina N Armstrong Spiridon Tsavachidis Xiangjun Gu Harsha V Doddapaneni Jianhong Hu Joy C Jayaseelan Donna M Muzny Jason T Huse Melissa L Bondy

Neuro Oncol 2018 11;20(12):1625-1633

Department of Medicine, Section of Epidemiology and Population Sciences, Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, Texas.

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November 2018

National Cancer Institute Biospecimen Evidence-Based Practices: Harmonizing Procedures for Nucleic Acid Extraction from Formalin-Fixed, Paraffin-Embedded Tissue.

Authors:
Sarah R Greytak Kelly B Engel Erik Zmuda Esmeralda Casas-Silva Ping Guan Katherine A Hoadley Andrew J Mungall David A Wheeler Harsha V Doddapaneni Helen M Moore

Biopreserv Biobank 2018 Aug 19;16(4):247-250. Epub 2018 Jun 19.

4 Biorepositories and Biospecimen Research Branch, Cancer Diagnosis Program, Division of Cancer Treatment and Diagnosis, National Cancer Institute , Bethesda, Maryland.

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August 2018

Non-malignant respiratory epithelial cells preferentially proliferate from resected non-small cell lung cancer specimens cultured under conditionally reprogrammed conditions.

Authors:
Boning Gao Chunxian Huang Kemp Kernstine Vasiliki Pelekanou Yuval Kluger Tingting Jiang Jennifer R Peters-Hall Melissa Coquelin Luc Girard Wei Zhang Kenneth Huffman Dwight Oliver Fumi Kinose Eric Haura Jamie K Teer Uwe Rix Anh T Le Dara L Aisner Marileila Varella-Garcia Robert C Doebele Kyle R Covington Oliver A Hampton Harsha V Doddapaneni Joy C Jayaseelan Jianhong Hu David A Wheeler Jerry W Shay David L Rimm Adi Gazdar John D Minna

Oncotarget 2017 Feb;8(7):11114-11126

Hamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas, USA.

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February 2017

Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma.

Authors:
W Marston Linehan Paul T Spellman Christopher J Ricketts Chad J Creighton Suzanne S Fei Caleb Davis David A Wheeler Bradley A Murray Laura Schmidt Cathy D Vocke Myron Peto Abu Amar M Al Mamun Eve Shinbrot Anurag Sethi Samira Brooks W Kimryn Rathmell Angela N Brooks Katherine A Hoadley A Gordon Robertson Denise Brooks Reanne Bowlby Sara Sadeghi Hui Shen Daniel J Weisenberger Moiz Bootwalla Stephen B Baylin Peter W Laird Andrew D Cherniack Gordon Saksena Scott Haake Jun Li Han Liang Yiling Lu Gordon B Mills Rehan Akbani Mark D M Leiserson Benjamin J Raphael Pavana Anur Donald Bottaro Laurence Albiges Nandita Barnabas Toni K Choueiri Bogdan Czerniak Andrew K Godwin A Ari Hakimi Thai H Ho James Hsieh Michael Ittmann William Y Kim Bhavani Krishnan Maria J Merino Kenna R Mills Shaw Victor E Reuter Ed Reznik Carl S Shelley Brian Shuch Sabina Signoretti Ramaprasad Srinivasan Pheroze Tamboli George Thomas Satish Tickoo Kenneth Burnett Daniel Crain Johanna Gardner Kevin Lau David Mallery Scott Morris Joseph D Paulauskis Robert J Penny Candace Shelton W Troy Shelton Mark Sherman Eric Thompson Peggy Yena Melissa T Avedon Jay Bowen Julie M Gastier-Foster Mark Gerken Kristen M Leraas Tara M Lichtenberg Nilsa C Ramirez Tracie Santos Lisa Wise Erik Zmuda John A Demchok Ina Felau Carolyn M Hutter Margi Sheth Heidi J Sofia Roy Tarnuzzer Zhining Wang Liming Yang Jean C Zenklusen Jiashan Zhang Brenda Ayala Julien Baboud Sudha Chudamani Jia Liu Laxmi Lolla Rashi Naresh Todd Pihl Qiang Sun Yunhu Wan Ye Wu Adrian Ally Miruna Balasundaram Saianand Balu Rameen Beroukhim Tom Bodenheimer Christian Buhay Yaron S N Butterfield Rebecca Carlsen Scott L Carter Hsu Chao Eric Chuah Amanda Clarke Kyle R Covington Mahmoud Dahdouli Ninad Dewal Noreen Dhalla Harsha V Doddapaneni Jennifer A Drummond Stacey B Gabriel Richard A Gibbs Ranabir Guin Walker Hale Alicia Hawes D Neil Hayes Robert A Holt Alan P Hoyle Stuart R Jefferys Steven J M Jones Corbin D Jones Divya Kalra Christie Kovar Lora Lewis Jie Li Yussanne Ma Marco A Marra Michael Mayo Shaowu Meng Matthew Meyerson Piotr A Mieczkowski Richard A Moore Donna Morton Lisle E Mose Andrew J Mungall Donna Muzny Joel S Parker Charles M Perou Jeffrey Roach Jacqueline E Schein Steven E Schumacher Yan Shi Janae V Simons Payal Sipahimalani Tara Skelly Matthew G Soloway Carrie Sougnez Angela Tam Donghui Tan Nina Thiessen Umadevi Veluvolu Min Wang Matthew D Wilkerson Tina Wong Junyuan Wu Liu Xi Jane Zhou Jason Bedford Fengju Chen Yao Fu Mark Gerstein David Haussler Katayoon Kasaian Phillip Lai Shiyun Ling Amie Radenbaugh David Van Den Berg John N Weinstein Jingchun Zhu Monique Albert Iakovina Alexopoulou Jeremiah J Andersen J Todd Auman John Bartlett Sheldon Bastacky Julie Bergsten Michael L Blute Lori Boice Roni J Bollag Jeff Boyd Erik Castle Ying-Bei Chen John C Cheville Erin Curley Benjamin Davies April DeVolk Rajiv Dhir Laura Dike John Eckman Jay Engel Jodi Harr Ronald Hrebinko Mei Huang Lori Huelsenbeck-Dill Mary Iacocca Bruce Jacobs Michael Lobis Jodi K Maranchie Scott McMeekin Jerome Myers Joel Nelson Jeremy Parfitt Anil Parwani Nicholas Petrelli Brenda Rabeno Somak Roy Andrew L Salner Joel Slaton Melissa Stanton R Houston Thompson Leigh Thorne Kelinda Tucker Paul M Weinberger Cynthia Winemiller Leigh Anne Zach Rosemary Zuna

N Engl J Med 2016 Jan 4;374(2):135-45. Epub 2015 Nov 4.

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January 2016

Structure and function of the healthy pre-adolescent pediatric gut microbiome.

Authors:
Emily B Hollister Kevin Riehle Ruth Ann Luna Erica M Weidler Michelle Rubio-Gonzales Toni-Ann Mistretta Sabeen Raza Harsha V Doddapaneni Ginger A Metcalf Donna M Muzny Richard A Gibbs Joseph F Petrosino Robert J Shulman James Versalovic

Microbiome 2015 Aug 26;3:36. Epub 2015 Aug 26.

Department of Pathology & Immunology, Baylor College of Medicine, Houston, TX, USA.

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August 2015

Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions.

Authors:
Clare A Anstead Pasi K Korhonen Neil D Young Ross S Hall Aaron R Jex Shwetha C Murali Daniel S T Hughes Siu F Lee Trent Perry Andreas J Stroehlein Brendan R E Ansell Bert Breugelmans Andreas Hofmann Jiaxin Qu Shannon Dugan Sandra L Lee Hsu Chao Huyen Dinh Yi Han Harsha V Doddapaneni Kim C Worley Donna M Muzny Panagiotis Ioannidis Robert M Waterhouse Evgeny M Zdobnov Peter J James Neil H Bagnall Andrew C Kotze Richard A Gibbs Stephen Richards Philip Batterham Robin B Gasser

Nat Commun 2015 Jun 25;6:7344. Epub 2015 Jun 25.

Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria 3010, Australia.

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June 2015

PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations.

Authors:
Min Wang Christine R Beck Adam C English Qingchang Meng Christian Buhay Yi Han Harsha V Doddapaneni Fuli Yu Eric Boerwinkle James R Lupski Donna M Muzny Richard A Gibbs

BMC Genomics 2015 Mar 19;16:214. Epub 2015 Mar 19.

Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, 77030, USA.

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March 2015