Harmen J G van de Werken

Harmen J G van de Werken

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Harmen J G van de Werken

Harmen J G van de Werken

Publications by authors named "Harmen J G van de Werken"

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Synchronous and metachronous urothelial carcinoma of the upper urinary tract and the bladder: Are they clonally related? A systematic review.

Urol Oncol 2020 Feb 11. Epub 2020 Feb 11.

Department of Urology, Erasmus MC Cancer Institute, University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1016/j.urolonc.2020.01.008DOI Listing
February 2020

Identification and Characterization of a Transcribed Distal Enhancer Involved in Cardiac Kcnh2 Regulation.

Cell Rep 2019 Sep;28(10):2704-2714.e5

Amsterdam UMC, University of Amsterdam, Department of Medical Biology, Amsterdam Cardiovascular Sciences, 1105AZ Amsterdam, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.08.007DOI Listing
September 2019

Oncogenic STRAP Supports Hepatocellular Carcinoma Growth by Enhancing Wnt/β-Catenin Signaling.

Mol Cancer Res 2019 02 26;17(2):521-531. Epub 2018 Sep 26.

Department of Gastroenterology and Hepatology, Erasmus MC, University Medical Center, Rotterdam, the Netherlands.

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http://dx.doi.org/10.1158/1541-7786.MCR-18-0054DOI Listing
February 2019

Molecular heterogeneity and early metastatic clone selection in testicular germ cell cancer development.

Br J Cancer 2019 02 11;120(4):444-452. Epub 2019 Feb 11.

Department of Pathology, Wytemaweg 80, 3015 CN, Erasmus MC Cancer Institute, University Medical Center Rotterdam, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1038/s41416-019-0381-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6461884PMC
February 2019

Fractionated Radiation of Primary Prostate Basal Cells Results in Downplay of Interferon Stem Cell and Cell Cycle Checkpoint Signatures.

Eur Urol 2018 12 18;74(6):847-849. Epub 2018 Jun 18.

Department of Urology, Division of Experimental Urology, Medical University of Innsbruck, Innsbruck, Austria. Electronic address:

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http://dx.doi.org/10.1016/j.eururo.2018.06.002DOI Listing
December 2018

SNPitty: An Intuitive Web Application for Interactive B-Allele Frequency and Copy Number Visualization of Next-Generation Sequencing Data.

J Mol Diagn 2018 03 2;20(2):166-176. Epub 2018 Jan 2.

Cancer Computational Biology Center, Erasmus MC, University Medical Center, Rotterdam, the Netherlands; Department of Urology, Erasmus MC, University Medical Center, Rotterdam, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2017.11.011DOI Listing
March 2018

TAF10 Interacts with the GATA1 Transcription Factor and Controls Mouse Erythropoiesis.

Mol Cell Biol 2015 Jun 13;35(12):2103-18. Epub 2015 Apr 13.

Cellular Signaling and Nuclear Dynamics Program, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), UMR 7104 CNRS, INSERM U964, Université de Strasbourg, Illkirch, France

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http://dx.doi.org/10.1128/MCB.01370-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4438247PMC
June 2015

The lncRNA MIR31HG regulates p16(INK4A) expression to modulate senescence.

Nat Commun 2015 Apr 24;6:6967. Epub 2015 Apr 24.

Biotech Research and Innovation Centre, University of Copenhagen, Ole Maaloes Vej 5, Copenhagen 2200, Denmark.

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http://dx.doi.org/10.1038/ncomms7967DOI Listing
April 2015

Endogenous WNT signals mediate BMP-induced and spontaneous differentiation of epiblast stem cells and human embryonic stem cells.

Stem Cell Reports 2015 Jan 24;4(1):114-128. Epub 2014 Dec 24.

Erasmus MC Stem Cell Institute, Erasmus MC, Wytemaweg 80, 3015 CN Rotterdam, the Netherlands; Department of Cell Biology, Erasmus MC, Wytemaweg 80, 3015 CN Rotterdam, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.stemcr.2014.11.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4297870PMC
January 2015

A large permissive regulatory domain exclusively controls Tbx3 expression in the cardiac conduction system.

Circ Res 2014 Aug 24;115(4):432-41. Epub 2014 Jun 24.

From the Department of Anatomy, Embryology, and Physiology, Academic Medical Center, Amsterdam, The Netherlands (J.H.v.W., I.B., M.v.d.B., S.S., P.B., V.M.C.); Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands (H.J.G.v.d.W., W.d.L.); Department of Cell Biology, Erasmus MC Rotterdam, Rotterdam, The Netherlands (H.J.G.v.d.W.); and Cardiovascular Development and Repair Department, Centro Nacional de Investigaciones Cardiovasculares, Madrid, Spain (M.G.-V., C.B.-C., M.M.).

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http://dx.doi.org/10.1161/CIRCRESAHA.115.303591DOI Listing
August 2014

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.

Proc Natl Acad Sci U S A 2014 Jan 13;111(3):996-1001. Epub 2013 Dec 13.

Department of Cell Biology, Biophysical Genomics, Department of Cell Biology, Center for Biomics, Cancer Genomics Center, Erasmus Medical Center, 3015 GE, Rotterdam, The Netherlands.

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http://dx.doi.org/10.1073/pnas.1317788111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3903193PMC
January 2014

4C technology: protocols and data analysis.

Methods Enzymol 2012 ;513:89-112

Hubrecht Institute-KNAW and University Medical Center Utrecht, Utrecht, The Netherlands.

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http://dx.doi.org/10.1016/B978-0-12-391938-0.00004-5DOI Listing
December 2012

Determining long-range chromatin interactions for selected genomic sites using 4C-seq technology: from fixation to computation.

Methods 2012 Nov 17;58(3):221-30. Epub 2012 May 17.

Hubrecht Institute-KNAW, University Medical Centre Utrecht, Utrecht 3584 CT, The Netherlands.

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http://dx.doi.org/10.1016/j.ymeth.2012.04.009DOI Listing
November 2012

Robust 4C-seq data analysis to screen for regulatory DNA interactions.

Nat Methods 2012 Oct 9;9(10):969-72. Epub 2012 Sep 9.

Hubrecht Institute, Royal Netherlands Academy of Arts and Sciences (KNAW), Utrecht, The Netherlands.

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http://dx.doi.org/10.1038/nmeth.2173DOI Listing
October 2012

A global transcriptional regulator in Thermococcus kodakaraensis controls the expression levels of both glycolytic and gluconeogenic enzyme-encoding genes.

J Biol Chem 2007 Nov 17;282(46):33659-70. Epub 2007 Sep 17.

Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan.

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http://dx.doi.org/10.1074/jbc.M703424200DOI Listing
November 2007

Identification of the missing links in prokaryotic pentose oxidation pathways: evidence for enzyme recruitment.

J Biol Chem 2006 Sep 17;281(37):27378-88. Epub 2006 Jul 17.

Laboratory of Microbiology, Department of Agrotechnology and Food Sciences, Wageningen University, Hesselink van Suchtelenweg 4, 6703 CT Wageningen, the Netherlands.

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http://dx.doi.org/10.1074/jbc.M605549200DOI Listing
September 2006

Identification of a glycolytic regulon in the archaea Pyrococcus and Thermococcus.

FEMS Microbiol Lett 2006 Jul;260(1):69-76

Laboratory of Microbiology, Wageningen University, Wageningen, The Netherlands.

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http://dx.doi.org/10.1111/j.1574-6968.2006.00292.xDOI Listing
July 2006

Two novel conjugative plasmids from a single strain of Sulfolobus.

Microbiology 2006 Jul;152(Pt 7):1951-68

Laboratory of Microbiology, Wageningen University, The Netherlands.

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http://dx.doi.org/10.1099/mic.0.28861-0DOI Listing
July 2006