Publications by authors named "Ha X Dang"

22Publications

Pan-cancer proteogenomic analysis reveals long and circular noncoding RNAs encoding peptides.

NAR Cancer 2020 Sep 11;2(3):zcaa015. Epub 2020 Aug 11.

McDonnell Genome Institute, Washington University in St. Louis, St. Louis, MO 63108, USA.

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http://dx.doi.org/10.1093/narcan/zcaa015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7418880PMC
September 2020

Long non-coding RNA is associated with lung adenocarcinoma prognosis.

Heliyon 2020 Mar 5;6(3):e03521. Epub 2020 Mar 5.

Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO, USA.

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http://dx.doi.org/10.1016/j.heliyon.2020.e03521DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7062942PMC
March 2020

Heparin-based hydrogel scaffolding alters the transcriptomic profile and increases the chemoresistance of MDA-MB-231 triple-negative breast cancer cells.

Biomater Sci 2020 May 24;8(10):2786-2796. Epub 2020 Feb 24.

Graduate Program in Translational Biology, Medicine and Health, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1039/c9bm01481kDOI Listing
May 2020

Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer.

Cell 2018 07 19;174(3):758-769.e9. Epub 2018 Jul 19.

Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco (UCSF), San Francisco, CA, USA; Division of Hematology and Oncology, Department of Medicine, UCSF, San Francisco, CA, USA; Department of Radiation Oncology, UCSF, San Francisco, CA, USA; Department of Urology, UCSF, San Francisco, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2018.06.039DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6425931PMC
July 2018

Comprehensive discovery of noncoding RNAs in acute myeloid leukemia cell transcriptomes.

Exp Hematol 2017 11 28;55:19-33. Epub 2017 Jul 28.

The McDonnell Genome Institute, Washington University, St. Louis, MO; Department of Medicine, Washington University, St. Louis, MO; Siteman Cancer Center, Washington University, St. Louis, MO; Department of Biomedical Engineering, Washington University, St. Louis, MO. Electronic address:

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http://dx.doi.org/10.1016/j.exphem.2017.07.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5772960PMC
November 2017

Visualizing tumor evolution with the fishplot package for R.

BMC Genomics 2016 11 7;17(1):880. Epub 2016 Nov 7.

McDonnell Genome Institute, Washington University School of Medicine, St. Louis, MO, 63108, USA.

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http://dx.doi.org/10.1186/s12864-016-3195-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100182PMC
November 2016

Multi-institutional Analysis Shows that Low PCAT-14 Expression Associates with Poor Outcomes in Prostate Cancer.

Eur Urol 2017 02 22;71(2):257-266. Epub 2016 Jul 22.

Department of Internal Medicine, Division of Oncology, Washington University School of Medicine, St. Louis, MO, USA; Alvin J. Siteman Cancer Center, Washington University School of Medicine, St. Louis, MO, USA; Beaumont Hospital-Dearborn, Transitional Year Program, Dearborn, MI, USA; Department of Biomedical Engineering, Washington University School of Medicine, St. Louis, MO, USA. Electronic address:

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http://dx.doi.org/10.1016/j.eururo.2016.07.012DOI Listing
February 2017

Optimizing cancer genome sequencing and analysis.

Cell Syst 2015 Sep;1(3):210-223

The McDonnell Genome Institute, Washington University, St. Louis, MO, USA, 63108 ; Department of Genetics, Washington University, St. Louis, MO, USA, 63108 ; Siteman Cancer Center, Washington University, St. Louis, MO, USA, 63108 ; Department of Medicine, Washington University, St. Louis, MO, USA, 63108.

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http://dx.doi.org/10.1016/j.cels.2015.08.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4669575PMC
September 2015

Clonotyping for precision oncology.

Drug Discov Today 2015 Dec 19;20(12):1464-9. Epub 2015 Oct 19.

McDonnell Genome Institute, Washington University School of Medicine, St Louis, MO 63110, USA; Department of Internal Medicine, Division of Oncology, Washington University School of Medicine, St Louis, MO 63110, USA; Alvin J. Siteman Cancer Center, Washington University School of Medicine, St Louis, MO 63110, USA; Department of Biomedical Engineering, Washington University School of Medicine, St Louis, MO 63110, USA. Electronic address:

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http://dx.doi.org/10.1016/j.drudis.2015.10.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4975004PMC
December 2015

The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species.

BMC Genomics 2015 Mar 25;16:239. Epub 2015 Mar 25.

Department of Biological Sciences, Virginia Tech, Blacksburg, Virginia, 24061, USA.

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http://dx.doi.org/10.1186/s12864-015-1430-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4387663PMC
March 2015

Allerdictor: fast allergen prediction using text classification techniques.

Bioinformatics 2014 04 7;30(8):1120-1128. Epub 2014 Jan 7.

Virginia Bioinformatics Institute and Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA Virginia Bioinformatics Institute and Department of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3982160PMC
April 2014