Grischa Toedt

Grischa Toedt

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Grischa Toedt

Grischa Toedt

Publications by authors named "Grischa Toedt"

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The Gene Ontology of eukaryotic cilia and flagella.

Cilia 2017 16;6:10. Epub 2017 Nov 16.

European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SD UK.

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http://dx.doi.org/10.1186/s13630-017-0054-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5688719PMC
November 2017

An siRNA-based functional genomics screen for the identification of regulators of ciliogenesis and ciliopathy genes.

Nat Cell Biol 2015 Aug 13;17(8):1074-1087. Epub 2015 Jul 13.

Section of Ophthalmology and Neuroscience, Leeds Institutes of Molecular Medicine, University of Leeds, Leeds, LS9 7TF, UK.

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http://www.nature.com/articles/ncb3201
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http://dx.doi.org/10.1038/ncb3201DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4536769PMC
August 2015

Elution profile analysis of SDS-induced subcomplexes by quantitative mass spectrometry.

Mol Cell Proteomics 2014 May 21;13(5):1382-91. Epub 2014 Feb 21.

Division of Experimental Ophthalmology and Medical Proteome Center, Centre for Ophthalmology, University of Tübingen, 72076 Tübingen, Germany;

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http://dx.doi.org/10.1074/mcp.O113.033233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4014293PMC
May 2014

Attributes of short linear motifs.

Mol Biosyst 2012 Jan 12;8(1):268-81. Epub 2011 Sep 12.

Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

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http://dx.doi.org/10.1039/c1mb05231dDOI Listing
January 2012

Elastic SCAD as a novel penalization method for SVM classification tasks in high-dimensional data.

BMC Bioinformatics 2011 May 9;12:138. Epub 2011 May 9.

German Cancer Research Center, Division Molecular Genetics, INF 280, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.1186/1471-2105-12-138DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3113938PMC
May 2011

Inflammatory cytokines and signaling pathways are associated with survival of primary chronic lymphocytic leukemia cells in vitro: a dominant role of CCL2.

Haematologica 2011 Mar 6;96(3):408-16. Epub 2010 Dec 6.

German Cancer Research Center, Dept. for Molecular Genetics, Im Neuenheimer Feld 280, 69120 Heidelberg, Germany.

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http://dx.doi.org/10.3324/haematol.2010.031377DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3046272PMC
March 2011

Recurrent copy number gain of transcription factor SOX2 and corresponding high protein expression in oral squamous cell carcinoma.

Genes Chromosomes Cancer 2010 Jan;49(1):9-16

Abteilung Molekulare Genetik (B060), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, Heidelberg D-69120, Germany.

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http://dx.doi.org/10.1002/gcc.20714DOI Listing
January 2010

penalizedSVM: a R-package for feature selection SVM classification.

Bioinformatics 2009 Jul 27;25(13):1711-2. Epub 2009 Apr 27.

Division Molecular Genetics and Division Biostatistics, Heidelberg, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btp286DOI Listing
July 2009

Outcome prediction in pediatric medulloblastoma based on DNA copy-number aberrations of chromosomes 6q and 17q and the MYC and MYCN loci.

J Clin Oncol 2009 Apr 2;27(10):1627-36. Epub 2009 Mar 2.

Division of Molecular Genetics and Biostatistics and Clinical Cooperation Unit Neuropathology, German Cancer Research Center, Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.

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http://dx.doi.org/10.1200/JCO.2008.17.9432DOI Listing
April 2009

Identification of novel oligodendroglioma-associated candidate tumor suppressor genes in 1p36 and 19q13 using microarray-based expression profiling.

Int J Cancer 2006 Aug;119(4):792-800

Division of Molecular Genetics (B060), Deutsches Krebsforschungszentrum, Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany.

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http://dx.doi.org/10.1002/ijc.21901DOI Listing
August 2006

Identification of gains on 1q and epidermal growth factor receptor overexpression as independent prognostic markers in intracranial ependymoma.

Clin Cancer Res 2006 Apr;12(7 Pt 1):2070-9

Division of Molecular Genetics and Central Unit Biostatistics, German Cancer Research Center, Heidelberg, Germany.

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http://dx.doi.org/10.1158/1078-0432.CCR-05-2363DOI Listing
April 2006

Recurrent coamplification of cytoskeleton-associated genes EMS1 and SHANK2 with CCND1 in oral squamous cell carcinoma.

Genes Chromosomes Cancer 2006 Feb;45(2):118-25

Abteilung Molekulare Genetik, B060, Deutsches Krebsforschungszentrum, Heidelberg, Germany.

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http://dx.doi.org/10.1002/gcc.20270DOI Listing
February 2006

Patient-based cross-platform comparison of oligonucleotide microarray expression profiles.

Lab Invest 2005 Aug;85(8):1024-39

1Division of Molecular Genetics, Deutsches Krebsforschungszentrum, Heidelberg, Germany.

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http://dx.doi.org/10.1038/labinvest.3700293DOI Listing
August 2005

Detection of chromosomal imbalances in retinoblastoma by matrix-based comparative genomic hybridization.

Genes Chromosomes Cancer 2005 Jul;43(3):294-301

German Cancer Research Center, Division of Molecular Genetics, Heidelberg, Germany.

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http://doi.wiley.com/10.1002/gcc.20186
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http://dx.doi.org/10.1002/gcc.20186DOI Listing
July 2005

FACT--a framework for the functional interpretation of high-throughput experiments.

BMC Bioinformatics 2005 Jun 28;6:161. Epub 2005 Jun 28.

Molecular Genetics, Deutsches Krebsforschungszentrum, 69115 Heidelberg, Germany.

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http://dx.doi.org/10.1186/1471-2105-6-161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1189078PMC
June 2005

Effective transcriptome amplification for expression profiling on sense-oriented oligonucleotide microarrays.

Nucleic Acids Res 2005 Feb 17;33(3):e29. Epub 2005 Feb 17.

Division of Molecular Genetics, Deutsches Krebsforschungszentrum Im Neuenheimer Feld 280, D-69120 Heidelberg, Germany.

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http://dx.doi.org/10.1093/nar/gni029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC549428PMC
February 2005

Site-specific protein modification to identify the MutL interface of MutH.

Nucleic Acids Res 2003 Feb;31(3):819-25

Institut für Biochemie (FB 08), Justus-Liebig-Universität, Heinrich-Buff-Ring 58, D-35392 Giessen, Germany.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC149211PMC
http://dx.doi.org/10.1093/nar/gkg191DOI Listing
February 2003