Gonzalo Lopez

Gonzalo Lopez

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Gonzalo Lopez

Gonzalo Lopez

Publications by authors named "Gonzalo Lopez"

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A longitudinal comparison of two neurocognitive test batteries in patients with schizophrenia and healthy volunteers: Time effects on neuropsychological performance and their relation to functional outcome.

Schizophr Res 2019 Dec 5. Epub 2019 Dec 5.

Department of Child and Adolescent Psychiatry, Institute of Psychiatry and Mental Health, Hospital General Universitario Gregorio Marañón, School of Medicine, Universidad Complutense, IiSGM, CIBERSAM, Madrid, Spain; Melbourne Neuropsychiatry Centre, Department of Psychiatry, University of Melbourne & Melbourne Health, Victoria, Australia.

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http://dx.doi.org/10.1016/j.schres.2019.11.018DOI Listing
December 2019

R2 prime (R2') magnetic resonance imaging for post-myocardial infarction intramyocardial haemorrhage quantification.

Eur Heart J Cardiovasc Imaging 2019 Dec 17. Epub 2019 Dec 17.

Translational Laboratory for Cardiovascular Imaging and Therapy, Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain.

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http://dx.doi.org/10.1093/ehjci/jez306DOI Listing
December 2019

Genomic Profiling of Childhood Tumor Patient-Derived Xenograft Models to Enable Rational Clinical Trial Design.

Cell Rep 2019 Nov;29(6):1675-1689.e9

Division of Oncology, Children's Hospital of Philadelphia, and Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104-4318, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.09.071DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6880934PMC
November 2019

Role of Tau Protein in Remodeling of Circadian Neuronal Circuits and Sleep.

Front Aging Neurosci 2019 21;11:320. Epub 2019 Nov 21.

Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, NY, United States.

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http://dx.doi.org/10.3389/fnagi.2019.00320DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6881280PMC
November 2019

Germline 16p11.2 Microdeletion Predisposes to Neuroblastoma.

Am J Hum Genet 2019 Sep 29;105(3):658-668. Epub 2019 Aug 29.

Cell and Molecular Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Division of Oncology, Department of Pediatrics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Center for Childhood Cancer Research, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA; Department of Biomedical and Health Informatics, Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA; Genomics and Computational Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA; Abramson Family Cancer Research Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2019.07.020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6731370PMC
September 2019

Autophagy inhibition overcomes sorafenib resistance in S45F-mutated desmoid tumors.

Cancer 2019 Aug 12;125(15):2693-2703. Epub 2019 Apr 12.

Program in Translational Therapeutics, The James Comprehensive Cancer Center, The Ohio State University, Columbus, Ohio.

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http://dx.doi.org/10.1002/cncr.32120DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625904PMC
August 2019

Serial Magnetic Resonance Imaging to Identify Early Stages of Anthracycline-Induced Cardiotoxicity.

J Am Coll Cardiol 2019 02;73(7):779-791

Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain; Centro de Investigación Biomédica en Red en Enfermedades Cardiovasculares (CIBERCV), Madrid, Spain; Cardiology Department, IIS-Fundación Jiménez Díaz Hospital, Madrid, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.jacc.2018.11.046DOI Listing
February 2019

Evaluating the Effect of HDAC8 Inhibition in Malignant Peripheral Nerve Sheath Tumors.

Methods Mol Biol 2017 ;1510:365-374

Division of Surgical Oncology, James Comprehensive Cancer Center, The Ohio State University, N-924 Doan Hall, 410W. 10th Avenue, Columbus, OH, 43210-1228, USA.

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http://dx.doi.org/10.1007/978-1-4939-6527-4_27DOI Listing
January 2018

Atrial Infarction and Ischemic Mitral Regurgitation Contribute to Post-MI Remodeling of the Left Atrium.

J Am Coll Cardiol 2017 Dec;70(23):2878-2889

Centro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, Spain; CIBER de enfermedades CardioVasculares, Madrid, Spain; Cardiology Department, IIS-Fundación Jiménez Díaz Hospital, Madrid, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.jacc.2017.10.013DOI Listing
December 2017

Identification of GPC2 as an Oncoprotein and Candidate Immunotherapeutic Target in High-Risk Neuroblastoma.

Cancer Cell 2017 09;32(3):295-309.e12

Division of Oncology and Center for Childhood Cancer Research, Children's Hospital of Philadelphia, Colket Translational Research Building, 3501 Civic Center Boulevard, Philadelphia, PA 19104, USA; Department of Pediatrics, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA 19104, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2017.08.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5600520PMC
September 2017

11q deletion in neuroblastoma: a review of biological and clinical implications.

Mol Cancer 2017 06 29;16(1):114. Epub 2017 Jun 29.

CANSEARCH Research Laboratory, Geneva University Medical School, Avenue de la Roseraie 64, 1205, Geneva, Switzerland.

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http://dx.doi.org/10.1186/s12943-017-0686-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5492892PMC
June 2017

HAUSP deubiquitinates and stabilizes N-Myc in neuroblastoma.

Nat Med 2016 10 12;22(10):1180-1186. Epub 2016 Sep 12.

Institute for Cancer Genetics, College of Physicians and Surgeons, Columbia University, New York, New York, USA.

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http://dx.doi.org/10.1038/nm.4180DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5091299PMC
October 2016

ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information.

Bioinformatics 2016 07 23;32(14):2233-5. Epub 2016 Apr 23.

Department of Systems Biology, Columbia University, New York, NY, USA.

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http://dx.doi.org/10.1093/bioinformatics/btw216DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4937200PMC
July 2016

SAR405838: A Novel and Potent Inhibitor of the MDM2:p53 Axis for the Treatment of Dedifferentiated Liposarcoma.

Clin Cancer Res 2016 Mar 16;22(5):1150-60. Epub 2015 Oct 16.

The Sarcoma Research Center, The University of Texas MD Anderson Cancer Center, Houston, Texas. Department of Surgical Oncology, Comprehensive Cancer Center, The Ohio State University (OSU), Columbus, Ohio. Department of Surgical Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas.

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http://dx.doi.org/10.1158/1078-0432.CCR-15-1522DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4775372PMC
March 2016

Elucidating Compound Mechanism of Action by Network Perturbation Analysis.

Cell 2015 Jul;162(2):441-451

Department of Biomedical Informatics (DBMI), Columbia University, New York, NY 10032, USA; Department of Systems Biology, Columbia University, New York, NY 10032, USA; Center for Computational Biology and Bioinformatics (C2B2), Columbia University, New York, NY 10032, USA; Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, USA; Institute for Cancer Genetics, Columbia University, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, Columbia University, New York, NY 10032, USA. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2015.05.056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506491PMC
July 2015

Inferring protein modulation from gene expression data using conditional mutual information.

PLoS One 2014 14;9(10):e109569. Epub 2014 Oct 14.

Department of Systems Biology, Columbia University, New York, New York, United States of America; Center for Computational Biology and Bioinformatics, Columbia University, New York, New York, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0109569PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4196905PMC
June 2015

Identifying gene-environment interactions in schizophrenia: contemporary challenges for integrated, large-scale investigations.

Authors:
Jim van Os Bart P Rutten Inez Myin-Germeys Philippe Delespaul Wolfgang Viechtbauer Catherine van Zelst Richard Bruggeman Ulrich Reininghaus Craig Morgan Robin M Murray Marta Di Forti Philip McGuire Lucia R Valmaggia Matthew J Kempton Charlotte Gayer-Anderson Kathryn Hubbard Stephanie Beards Simona A Stilo Adanna Onyejiaka Francois Bourque Gemma Modinos Stefania Tognin Maria Calem Michael C O'Donovan Michael J Owen Peter Holmans Nigel Williams Nicholas Craddock Alexander Richards Isla Humphreys Andreas Meyer-Lindenberg F Markus Leweke Heike Tost Ceren Akdeniz Cathrin Rohleder J Malte Bumb Emanuel Schwarz Köksal Alptekin Alp Üçok Meram Can Saka E Cem Atbaşoğlu Sinan Gülöksüz Guvem Gumus-Akay Burçin Cihan Hasan Karadağ Haldan Soygür Eylem Şahin Cankurtaran Semra Ulusoy Berna Akdede Tolga Binbay Ahmet Ayer Handan Noyan Gülşah Karadayı Elçin Akturan Halis Ulaş Celso Arango Mara Parellada Miguel Bernardo Julio Sanjuán Julio Bobes Manuel Arrojo Jose Luis Santos Pedro Cuadrado José Juan Rodríguez Solano Angel Carracedo Enrique García Bernardo Laura Roldán Gonzalo López Bibiana Cabrera Sabrina Cruz Eva Ma Díaz Mesa María Pouso Estela Jiménez Teresa Sánchez Marta Rapado Emiliano González Covadonga Martínez Emilio Sánchez Ma Soledad Olmeda Lieuwe de Haan Eva Velthorst Mark van der Gaag Jean-Paul Selten Daniella van Dam Elsje van der Ven Floor van der Meer Elles Messchaert Tamar Kraan Nadine Burger Marion Leboyer Andrei Szoke Franck Schürhoff Pierre-Michel Llorca Stéphane Jamain Andrea Tortelli Flora Frijda Jeanne Vilain Anne-Marie Galliot Grégoire Baudin Aziz Ferchiou Jean-Romain Richard Ewa Bulzacka Thomas Charpeaud Anne-Marie Tronche Marc De Hert Ruud van Winkel Jeroen Decoster Catherine Derom Evert Thiery Nikos C Stefanis Gabriele Sachs Harald Aschauer Iris Lasser Bernadette Winklbaur Monika Schlögelhofer Anita Riecher-Rössler Stefan Borgwardt Anna Walter Fabienne Harrisberger Renata Smieskova Charlotte Rapp Sarah Ittig Fabienne Soguel-dit-Piquard Erich Studerus Joachim Klosterkötter Stephan Ruhrmann Julia Paruch Dominika Julkowski Desiree Hilboll Pak C Sham Stacey S Cherny Eric Y H Chen Desmond D Campbell Miaoxin Li Carlos María Romeo-Casabona Aitziber Emaldi Cirión Asier Urruela Mora Peter Jones James Kirkbride Mary Cannon Dan Rujescu Ilaria Tarricone Domenico Berardi Elena Bonora Marco Seri Thomas Marcacci Luigi Chiri Federico Chierzi Viviana Storbini Mauro Braca Maria Gabriella Minenna Ivonne Donegani Angelo Fioritti Daniele La Barbera Caterina Erika La Cascia Alice Mulè Lucia Sideli Rachele Sartorio Laura Ferraro Giada Tripoli Fabio Seminerio Anna Maria Marinaro Patrick McGorry Barnaby Nelson G Paul Amminger Christos Pantelis Paulo R Menezes Cristina M Del-Ben Silvia H Gallo Tenan Rosana Shuhama Mirella Ruggeri Sarah Tosato Antonio Lasalvia Chiara Bonetto Elisa Ira Merete Nordentoft Marie-Odile Krebs Neus Barrantes-Vidal Paula Cristóbal Thomas R Kwapil Elisa Brietzke Rodrigo A Bressan Ary Gadelha Nadja P Maric Sanja Andric Marina Mihaljevic Tijana Mirjanic

Schizophr Bull 2014 Jul 24;40(4):729-36. Epub 2014 May 24.

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http://dx.doi.org/10.1093/schbul/sbu069DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4059449PMC
July 2014

FireDB: a compendium of biological and pharmacologically relevant ligands.

Nucleic Acids Res 2014 Jan 15;42(Database issue):D267-72. Epub 2013 Nov 15.

Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre, Madrid, 28029, Spain and Spanish National Bioinformatics Institute (INB-ISCIII).

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
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http://dx.doi.org/10.1093/nar/gkt1127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965074PMC
January 2014

APPRIS: annotation of principal and alternative splice isoforms.

Nucleic Acids Res 2013 Jan 17;41(Database issue):D110-7. Epub 2012 Nov 17.

Spanish National Bioinformatics Institute (INB), Madrid 28029, Spain.

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http://dx.doi.org/10.1093/nar/gks1058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531113PMC
January 2013

Atypical "black hole" phenomenon after treatment of sirolimus stent restenosis with a paclitaxel-coated balloon.

EuroIntervention 2012 Apr;7(12):1479

Interventional Cardiology Unit, Hospital Clínico Universitario Lozano Blesa, Zaragoza, Spain.

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http://dx.doi.org/10.4244/EIJV7I12A231DOI Listing
April 2012

Combining EGFR and mTOR blockade for the treatment of epithelioid sarcoma.

Clin Cancer Res 2011 Sep 5;17(18):5901-12. Epub 2011 Aug 5.

Department of Surgical Oncology, Adult Sarcoma Research Center, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-11-0660DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3176924PMC
September 2011

firestar--advances in the prediction of functionally important residues.

Nucleic Acids Res 2011 Jul 14;39(Web Server issue):W235-41. Epub 2011 Jun 14.

Structural Computational Biology Group, Spanish National Cancer Research Centre (CNIO), c. Melchor Fernandez Almagro, 3, 28029 Madrid, Spain.

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http://dx.doi.org/10.1093/nar/gkr437DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3125799PMC
July 2011

Autophagy blockade enhances HDAC inhibitors' pro-apoptotic effects: potential implications for the treatment of a therapeutic-resistant malignancy.

Autophagy 2011 Apr 1;7(4):440-1. Epub 2011 Apr 1.

Department of Cancer Biology, The University of Texas, MD Anderson Cancer Center, Houston, TX, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3127223PMC
http://dx.doi.org/10.4161/auto.7.4.14680DOI Listing
April 2011

Assessment of ligand binding residue predictions in CASP8.

Proteins 2009 ;77 Suppl 9:138-46

Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid, Spain.

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http://dx.doi.org/10.1002/prot.22557DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3204792PMC
January 2010

Combining PCI-24781, a novel histone deacetylase inhibitor, with chemotherapy for the treatment of soft tissue sarcoma.

Clin Cancer Res 2009 May 5;15(10):3472-83. Epub 2009 May 5.

Department of Cancer Biology, Sarcoma Research Center, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-08-2714DOI Listing
May 2009

Assessment of predictions submitted for the CASP7 function prediction category.

Proteins 2007 ;69 Suppl 8:165-74

Structural and Computational Biology Programme, Spanish National Cancer Research Centre, Almagro, Madrid, Spain.

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http://dx.doi.org/10.1002/prot.21651DOI Listing
January 2008

Determination and validation of principal gene products.

Bioinformatics 2008 Jan 15;24(1):11-7. Epub 2007 Nov 15.

Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre, Madrid, Spain.

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http://dx.doi.org/10.1093/bioinformatics/btm547DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2734078PMC
January 2008

firestar--prediction of functionally important residues using structural templates and alignment reliability.

Nucleic Acids Res 2007 Jul 21;35(Web Server issue):W573-7. Epub 2007 Jun 21.

Structural Biology and Biocomputing Program, Spanish National Cancer Research Centre (CNIO) Melchor Fernández Almagro, 3, E-28029, Madrid, Spain.

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http://dx.doi.org/10.1093/nar/gkm297DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933227PMC
July 2007

FireDB--a database of functionally important residues from proteins of known structure.

Nucleic Acids Res 2007 Jan 28;35(Database issue):D219-23. Epub 2006 Nov 28.

Computational and Structural Biology Program, Spanish National Cancer Research Centre (CNIO) Melchor Fernández Almagro, 3, E-28029, Madrid, Spain.

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https://academic.oup.com/nar/article-lookup/doi/10.1093/nar/
Publisher Site
http://dx.doi.org/10.1093/nar/gkl897DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1716728PMC
January 2007

Domain definition and target classification for CASP6.

Proteins 2005 ;61 Suppl 7:8-18

Protein Design Group, CNB-CSIC, Calle Darwin, 28049 Cantoblanco, Spain.

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http://dx.doi.org/10.1002/prot.20717DOI Listing
May 2006

Assessment of predictions submitted for the CASP6 comparative modeling category.

Proteins 2005 ;61 Suppl 7:27-45

Protein Design Group, CNB-CSIC, Cantoblanco, Madrid, Spain.

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http://dx.doi.org/10.1002/prot.20720DOI Listing
May 2006

Scoring docking models with evolutionary information.

Proteins 2005 Aug;60(2):275-80

Protein Design Group, CNB-CSIC, Cantoblanco, Madrid, Spain.

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http://dx.doi.org/10.1002/prot.20570DOI Listing
August 2005

Cross reactivity of three antivenoms against North American snake venoms.

Toxicon 2003 Mar;41(3):315-20

Department of Biology, Natural Toxins Research Center (NTRC), Texas A&M University-Kingsville, MSC 158, Kingsville, TX 78363, USA.

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http://dx.doi.org/10.1016/s0041-0101(02)00293-3DOI Listing
March 2003