Ginger Metcalf

Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas; Texas Children's Microbiome Center, Texas Children's Hospital, Houston, Texas; Department of Pathology, Texas Children's Hospital, Houston, Texas; Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas. Electronic address:

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May 2019

Temporal development of the gut microbiome in early childhood from the TEDDY study.

Nature 2018 10 24;562(7728):583-588. Epub 2018 Oct 24.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.

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October 2018

Sequence-Based Analysis of Lipid-Related Metabolites in a Multiethnic Study.

Authors:

Elena V Feofanova Bing Yu Ginger A Metcalf Xiaoming Liu Donna Muzny Jennifer E Below Lynne E Wagenknecht Richard A Gibbs Alanna C Morrison Eric Boerwinkle

Genetics 2018 06 2;209(2):607-616. Epub 2018 Apr 2.

Human Genetics Center, University of Texas Health Science Center at Houston, Texas 77030

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June 2018

The gut mycobiome of the Human Microbiome Project healthy cohort.

Authors:

Andrea K Nash Thomas A Auchtung Matthew C Wong Daniel P Smith Jonathan R Gesell Matthew C Ross Christopher J Stewart Ginger A Metcalf Donna M Muzny Richard A Gibbs Nadim J Ajami Joseph F Petrosino

Microbiome 2017 Nov 25;5(1):153. Epub 2017 Nov 25.

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.

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November 2017

Whole-genome sequencing study of serum peptide levels: the Atherosclerosis Risk in Communities study.

Authors:

Paul S de Vries Bing Yu Elena V Feofanova Ginger A Metcalf Michael R Brown Atefeh L Zeighami Xiaoming Liu Donna M Muzny Richard A Gibbs Eric Boerwinkle Alanna C Morrison

Hum Mol Genet 2017 09;26(17):3442-3450

Department of Epidemiology, Human Genetics, and Environmental Sciences, Human Genetics Center, School of Public Health, The University of Texas Health Science Center at Houston, Houston, 77030 TX, USA.

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September 2017

Whole exome sequencing in the Framingham Heart Study identifies rare variation in HYAL2 that influences platelet aggregation.

Authors:

John D Eicher Ming-Huei Chen Achilleas N Pitsillides Honghuang Lin Narayanan Veeraraghavan Jennifer A Brody Ginger A Metcalf Donna M Muzny Richard A Gibbs Diane M Becker Lewis C Becker Nauder Faraday Rasika A Mathias Lisa R Yanek Eric Boerwinkle L Adrienne Cupples Andrew D Johnson

Thromb Haemost 2017 06 16;117(6):1083-1092. Epub 2017 Mar 16.

Andrew D. Johnson, Tenure Track Investigator, Population Sciences Branch, National Heart, Lung, and Blood Institute, The Framingham Heart Study, 73 Mt. Wayte Ave. Suite #2, Framingham, MA 01702, USA, Tel.: +1 508 663 4082, E-mail:

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June 2017

Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits.

Authors:

Alanna C Morrison Zhuoyi Huang Bing Yu Ginger Metcalf Xiaoming Liu Christie Ballantyne Josef Coresh Fuli Yu Donna Muzny Elena Feofanova Navin Rustagi Richard Gibbs Eric Boerwinkle

Am J Hum Genet 2017 02 12;100(2):205-215. Epub 2017 Jan 12.

Human Genetics Center, University of Texas School of Public Health, Houston, TX 77030, USA; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address:

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February 2017

Whole-exome sequencing reveals an inherited R566X mutation of the epithelial sodium channel β-subunit in a case of early-onset phenotype of Liddle syndrome.

Authors:

Linda M Polfus Eric Boerwinkle Richard A Gibbs Ginger Metcalf Donna Muzny Narayanan Veeraraghavan Megan Grove Sanjay Shete Stephanie Wallace Dianna Milewicz Neil Hanchard James R Lupski Syed Shahrukh Hashmi Monesha Gupta-Malhotra

Cold Spring Harb Mol Case Stud 2016 11;2(6):a001255

Department of Pediatric Cardiology, Johns Hopkins All Children's Hospital, St. Petersburg, Florida 33701, USA.

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November 2016

Whole genome sequence analysis of serum amino acid levels.

Authors:

Bing Yu Paul S de Vries Ginger A Metcalf Zhe Wang Elena V Feofanova Xiaoming Liu Donna Marie Muzny Lynne E Wagenknecht Richard A Gibbs Alanna C Morrison Eric Boerwinkle

Genome Biol 2016 11 24;17(1):237. Epub 2016 Nov 24.

Human Genetics Center, University of Texas Health Science Center at Houston, Houston, TX, USA.

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November 2016

Loss-of-function variants influence the human serum metabolome.

Authors:

Bing Yu Alexander H Li Ginger A Metcalf Donna M Muzny Alanna C Morrison Simon White Thomas H Mosley Richard A Gibbs Eric Boerwinkle

Sci Adv 2016 08 31;2(8):e1600800. Epub 2016 Aug 31.

Human Genetics Center, University of Texas Health Science Center at Houston, Houston, TX 77030, USA.; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA.

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August 2016

Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis.

Authors:

Linda M Polfus Rajiv K Khajuria Ursula M Schick Nathan Pankratz Raha Pazoki Jennifer A Brody Ming-Huei Chen Paul L Auer James S Floyd Jie Huang Leslie Lange Frank J A van Rooij Richard A Gibbs Ginger Metcalf Donna Muzny Narayanan Veeraraghavan Klaudia Walter Lu Chen Lisa Yanek Lewis C Becker Gina M Peloso Aoi Wakabayashi Mart Kals Andres Metspalu Tõnu Esko Keolu Fox Robert Wallace Nora Franceschini Nena Matijevic Kenneth M Rice Traci M Bartz Leo-Pekka Lyytikäinen Mika Kähönen Terho Lehtimäki Olli T Raitakari Ruifang Li-Gao Dennis O Mook-Kanamori Guillaume Lettre Cornelia M van Duijn Oscar H Franco Stephen S Rich Fernando Rivadeneira Albert Hofman André G Uitterlinden James G Wilson Bruce M Psaty Nicole Soranzo Abbas Dehghan Eric Boerwinkle Xiaoling Zhang Andrew D Johnson Christopher J O'Donnell Jill M Johnsen Alexander P Reiner Santhi K Ganesh Vijay G Sankaran

Am J Hum Genet 2016 09 1;99(3):785. Epub 2016 Sep 1.

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September 2016

Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis.

Authors:

Linda M Polfus Rajiv K Khajuria Ursula M Schick Nathan Pankratz Raha Pazoki Jennifer A Brody Ming-Huei Chen Paul L Auer James S Floyd Jie Huang Leslie Lange Frank J A van Rooij Richard A Gibbs Ginger Metcalf Donna Muzny Narayanan Veeraraghavan Klaudia Walter Lu Chen Lisa Yanek Lewis C Becker Gina M Peloso Aoi Wakabayashi Mart Kals Andres Metspalu Tõnu Esko Keolu Fox Robert Wallace Nora Franceschini Nena Matijevic Kenneth M Rice Traci M Bartz Leo-Pekka Lyytikäinen Mika Kähönen Terho Lehtimäki Olli T Raitakari Ruifang Li-Gao Dennis O Mook-Kanamori Guillaume Lettre Cornelia M van Duijn Oscar H Franco Stephen S Rich Fernando Rivadeneira Albert Hofman André G Uitterlinden James G Wilson Bruce M Psaty Nicole Soranzo Abbas Dehghan Eric Boerwinkle Xiaoling Zhang Andrew D Johnson Christopher J O'Donnell Jill M Johnsen Alexander P Reiner Santhi K Ganesh Vijay G Sankaran

Am J Hum Genet 2016 08;99(2):481-8

Division of Hematology/Oncology, Boston Children's Hospital and Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, MA 02115, USA,; Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA. Electronic address:

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August 2016

Rare Exome Sequence Variants in CLCN6 Reduce Blood Pressure Levels and Hypertension Risk.

Circ Cardiovasc Genet 2016 Feb 11;9(1):64-70. Epub 2015 Dec 11.

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February 2016

Structure and function of the healthy pre-adolescent pediatric gut microbiome.

Authors:

Emily B Hollister Kevin Riehle Ruth Ann Luna Erica M Weidler Michelle Rubio-Gonzales Toni-Ann Mistretta Sabeen Raza Harsha V Doddapaneni Ginger A Metcalf Donna M Muzny Richard A Gibbs Joseph F Petrosino Robert J Shulman James Versalovic

Microbiome 2015 Aug 26;3:36. Epub 2015 Aug 26.

Department of Pathology & Immunology, Baylor College of Medicine, Houston, TX, USA.

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August 2015

Analysis of loss-of-function variants and 20 risk factor phenotypes in 8,554 individuals identifies loci influencing chronic disease.

Authors:

Alexander H Li Alanna C Morrison Christie Kovar L Adrienne Cupples Jennifer A Brody Linda M Polfus Bing Yu Ginger Metcalf Donna Muzny Narayanan Veeraraghavan Xiaoming Liu Thomas Lumley Thomas H Mosley Richard A Gibbs Eric Boerwinkle

Nat Genet 2015 Jun 27;47(6):640-2. Epub 2015 Apr 27.

1] Human Genetics Center, University of Texas Health Science Center, Houston, Texas, USA. [2] Human Genome Sequencing Center, Baylor College of Medicine, Houston, Texas, USA.

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June 2015

Low-frequency and rare exome chip variants associate with fasting glucose and type 2 diabetes susceptibility.

Authors:

Jennifer Wessel Audrey Y Chu Sara M Willems Shuai Wang Hanieh Yaghootkar Jennifer A Brody Marco Dauriz Marie-France Hivert Sridharan Raghavan Leonard Lipovich Bertha Hidalgo Keolu Fox Jennifer E Huffman Ping An Yingchang Lu Laura J Rasmussen-Torvik Niels Grarup Margaret G Ehm Li Li Abigail S Baldridge Alena Stančáková Ravinder Abrol Céline Besse Anne Boland Jette Bork-Jensen Myriam Fornage Daniel F Freitag Melissa E Garcia Xiuqing Guo Kazuo Hara Aaron Isaacs Johanna Jakobsdottir Leslie A Lange Jill C Layton Man Li Jing Hua Zhao Karina Meidtner Alanna C Morrison Mike A Nalls Marjolein J Peters Maria Sabater-Lleal Claudia Schurmann Angela Silveira Albert V Smith Lorraine Southam Marcus H Stoiber Rona J Strawbridge Kent D Taylor Tibor V Varga Kristine H Allin Najaf Amin Jennifer L Aponte Tin Aung Caterina Barbieri Nathan A Bihlmeyer Michael Boehnke Cristina Bombieri Donald W Bowden Sean M Burns Yuning Chen Yii-DerI Chen Ching-Yu Cheng Adolfo Correa Jacek Czajkowski Abbas Dehghan Georg B Ehret Gudny Eiriksdottir Stefan A Escher Aliki-Eleni Farmaki Mattias Frånberg Giovanni Gambaro Franco Giulianini William A Goddard Anuj Goel Omri Gottesman Megan L Grove Stefan Gustafsson Yang Hai Göran Hallmans Jiyoung Heo Per Hoffmann Mohammad K Ikram Richard A Jensen Marit E Jørgensen Torben Jørgensen Maria Karaleftheri Chiea C Khor Andrea Kirkpatrick Aldi T Kraja Johanna Kuusisto Ethan M Lange I T Lee Wen-Jane Lee Aaron Leong Jiemin Liao Chunyu Liu Yongmei Liu Cecilia M Lindgren Allan Linneberg Giovanni Malerba Vasiliki Mamakou Eirini Marouli Nisa M Maruthur Angela Matchan Roberta McKean-Cowdin Olga McLeod Ginger A Metcalf Karen L Mohlke Donna M Muzny Ioanna Ntalla Nicholette D Palmer Dorota Pasko Andreas Peter Nigel W Rayner Frida Renström Ken Rice Cinzia F Sala Bengt Sennblad Ioannis Serafetinidis Jennifer A Smith Nicole Soranzo Elizabeth K Speliotes Eli A Stahl Kathleen Stirrups Nikos Tentolouris Anastasia Thanopoulou Mina Torres Michela Traglia Emmanouil Tsafantakis Sundas Javad Lisa R Yanek Eleni Zengini Diane M Becker Joshua C Bis James B Brown L Adrienne Cupples Torben Hansen Erik Ingelsson Andrew J Karter Carlos Lorenzo Rasika A Mathias Jill M Norris Gina M Peloso Wayne H-H Sheu Daniela Toniolo Dhananjay Vaidya Rohit Varma Lynne E Wagenknecht Heiner Boeing Erwin P Bottinger George Dedoussis Panos Deloukas Ele Ferrannini Oscar H Franco Paul W Franks Richard A Gibbs Vilmundur Gudnason Anders Hamsten Tamara B Harris Andrew T Hattersley Caroline Hayward Albert Hofman Jan-Håkan Jansson Claudia Langenberg Lenore J Launer Daniel Levy Ben A Oostra Christopher J O'Donnell Stephen O'Rahilly Sandosh Padmanabhan James S Pankow Ozren Polasek Michael A Province Stephen S Rich Paul M Ridker Igor Rudan Matthias B Schulze Blair H Smith André G Uitterlinden Mark Walker Hugh Watkins Tien Y Wong Eleftheria Zeggini Markku Laakso Ingrid B Borecki Daniel I Chasman Oluf Pedersen Bruce M Psaty E Shyong Tai Cornelia M van Duijn Nicholas J Wareham Dawn M Waterworth Eric Boerwinkle W H Linda Kao Jose C Florez Ruth J F Loos James G Wilson Timothy M Frayling David S Siscovick Josée Dupuis Jerome I Rotter James B Meigs Robert A Scott Mark O Goodarzi

Nat Commun 2015 Jan 29;6:5897. Epub 2015 Jan 29.

1] Department of Medicine and Department of Biomedical Sciences, Cedars-Sinai Medical Center, Los Angeles, California 90048, USA [2] Division of Endocrinology, Diabetes and Metabolism, Cedars-Sinai Medical Center, Los Angeles, California 90048, USA.

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January 2015

Somatic mutations affect key pathways in lung adenocarcinoma.

Authors:

Li Ding Gad Getz David A Wheeler Elaine R Mardis Michael D McLellan Kristian Cibulskis Carrie Sougnez Heidi Greulich Donna M Muzny Margaret B Morgan Lucinda Fulton Robert S Fulton Qunyuan Zhang Michael C Wendl Michael S Lawrence David E Larson Ken Chen David J Dooling Aniko Sabo Alicia C Hawes Hua Shen Shalini N Jhangiani Lora R Lewis Otis Hall Yiming Zhu Tittu Mathew Yanru Ren Jiqiang Yao Steven E Scherer Kerstin Clerc Ginger A Metcalf Brian Ng Aleksandar Milosavljevic Manuel L Gonzalez-Garay John R Osborne Rick Meyer Xiaoqi Shi Yuzhu Tang Daniel C Koboldt Ling Lin Rachel Abbott Tracie L Miner Craig Pohl Ginger Fewell Carrie Haipek Heather Schmidt Brian H Dunford-Shore Aldi Kraja Seth D Crosby Christopher S Sawyer Tammi Vickery Sacha Sander Jody Robinson Wendy Winckler Jennifer Baldwin Lucian R Chirieac Amit Dutt Tim Fennell Megan Hanna Bruce E Johnson Robert C Onofrio Roman K Thomas Giovanni Tonon Barbara A Weir Xiaojun Zhao Liuda Ziaugra Michael C Zody Thomas Giordano Mark B Orringer Jack A Roth Margaret R Spitz Ignacio I Wistuba Bradley Ozenberger Peter J Good Andrew C Chang David G Beer Mark A Watson Marc Ladanyi Stephen Broderick Akihiko Yoshizawa William D Travis William Pao Michael A Province George M Weinstock Harold E Varmus Stacey B Gabriel Eric S Lander Richard A Gibbs Matthew Meyerson Richard K Wilson

Nature 2008 Oct;455(7216):1069-75

The Genome Center at Washington University, Department of Genetics, Washington University School of Medicine, St Louis, Missouri 63108, USA.

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October 2008

Publications by authors named "Ginger Metcalf"

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