Gerrit A Meijer

Gerrit A Meijer

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Gerrit A Meijer

Gerrit A Meijer

Publications by authors named "Gerrit A Meijer"

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The landscape of genomic copy number alterations in colorectal cancer and their consequences on gene expression levels and disease outcome.

Mol Aspects Med 2019 Oct 6;69:48-61. Epub 2019 Aug 6.

Gastrointestinal and Pancreatic Oncology Group, Institut D'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), CIBEREHD, Barcelona, Spain; Unitat de Biologia Cel·lular i Genètica Mèdica, Departament de Biologia Cel·lular, Fisiologia i Immunologia, Facultat de Medicina, Universitat Autònoma de Barcelona, Bellaterra, Spain. Electronic address:

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http://dx.doi.org/10.1016/j.mam.2019.07.007DOI Listing
October 2019

American Association for Cancer Research Project Genomics Evidence Neoplasia Information Exchange: From Inception to First Data Release and Beyond-Lessons Learned and Member Institutions' Perspectives.

JCO Clin Cancer Inform 2018 12;2:1-14

Christine M. Micheel, Michele L. LeNoue-Newton, and Mia A. Levy, Vanderbilt University Medical Center, Nashville, TN; Shawn M. Sweeney, American Association for Cancer Research, Philadelphia, PA; Fabrice André, Institut Gustave Roussy, Villejuif, France; Philippe L. Bedard, University of Toronto, Toronto, Ontario, Canada; Justin Guinney, Sage Bionetworks, Seattle, WA; Gerrit A. Meijer, Netherlands Cancer Institute, Amsterdam, the Netherlands; Barrett J. Rollins, Dana-Farber Cancer Institute, Brigham and Women's Hospital, and Harvard Medical School, Boston, MA; Charles L. Sawyers and Nikolaus Schultz, Memorial Sloan Kettering Cancer Center, New York, NY; Charles L. Sawyers, Howard Hughes Medical Institute, Chevy Chase, MD; Victor E. Velculescu, Johns Hopkins University School of Medicine, Baltimore, MD; and Kenna R. Mills Shaw, The University of Texas MD Anderson Cancer Center, Houston, TX.

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http://dx.doi.org/10.1200/CCI.17.00083DOI Listing
December 2018

Loss of Chromosome 18q11.2-q12.1 Is Predictive for Survival in Patients With Metastatic Colorectal Cancer Treated With Bevacizumab.

J Clin Oncol 2018 07 24;36(20):2052-2060. Epub 2018 May 24.

Erik van Dijk, Hedde D. Biesma, Martijn Cordes, Maarten Neerincx, Paul P. Eijk, Henk M.W. Verheul, Nicole C.T. van Grieken, and Bauke Ylstra, Vrije Universiteit Medical Center; Gerrit A. Meijer, Netherlands Cancer Institute; Cornelis J.A. Punt, Academic Medical Center, Amsterdam; Miriam Koopman, University Medical Center Utrecht, Utrecht, the Netherlands; Dominiek Smeets and Diether Lambrechts, KU Leuven, Leuven, Belgium; Sudipto Das, Orna Bacon, Jochen H.M. Prehn, Bryan T. Hennessey, Darran P. O'Connor, and Annette T. Byrne, Royal College of Surgeons in Ireland; Verena Murphy, Cancer Trials Ireland; Anna Barat, Deborah A. McNamara, and Elaine W. Kay, Beaumont Hospital; Bozena Fender and William M. Gallagher, OncoMark Ltd; Rut Klinger and William M. Gallagher, University College Dublin, Dublin, United Kingdom; Johannes Betge, Timo Gaiser, and Matthias P.A. Ebert, University Hospital Mannheim, Mannheim, Germany; and Fotios Loupakis, Veneto Institute of Oncology IOV-IRCCS Padua, Italy.

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http://dx.doi.org/10.1200/JCO.2017.77.1782DOI Listing
July 2018

Novel Stool-Based Protein Biomarkers for Improved Colorectal Cancer Screening: A Case-Control Study.

Ann Intern Med 2017 Dec 21;167(12):855-866. Epub 2017 Nov 21.

From Netherlands Cancer Institute, Amsterdam; VU University Medical Center, Amsterdam; MDxHealth, Herstal, and Ghent University, Ghent, Belgium; and Kennemer Gasthuis, Haarlem, the Netherlands.

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http://dx.doi.org/10.7326/M17-1068DOI Listing
December 2017

Identification of Differentially Expressed Splice Variants by the Proteogenomic Pipeline Splicify.

Mol Cell Proteomics 2017 10 26;16(10):1850-1863. Epub 2017 Jul 26.

From the ‡Translational Gastrointestinal Oncology, Department of Pathology, Netherlands Cancer Institute, Amsterdam, the Netherlands;

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http://dx.doi.org/10.1074/mcp.TIR117.000056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5629268PMC
October 2017

Screening for Colorectal Cancer With Fecal Immunochemical Testing With and Without Postpolypectomy Surveillance Colonoscopy: A Cost-Effectiveness Analysis.

Ann Intern Med 2017 Oct 3;167(8):544-554. Epub 2017 Oct 3.

From VU University Medical Center, Academic Medical Center, and Netherlands Cancer Institute, Amsterdam, the Netherlands.

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http://dx.doi.org/10.7326/M16-2891DOI Listing
October 2017

Why is colon cancer survival improving by time? A nationwide survival analysis spanning 35 years.

Int J Cancer 2017 08 19;141(3):531-539. Epub 2017 May 19.

Department of Pathology, National University Hospital, Reykjavik, Iceland.

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http://dx.doi.org/10.1002/ijc.30766DOI Listing
August 2017

Molecular stool testing as an alternative for surveillance colonoscopy: a cross-sectional cohort study.

BMC Cancer 2017 Feb 7;17(1):116. Epub 2017 Feb 7.

Department of Pathology, The Netherlands Cancer Institute, Plesmanlaan 121 1066 CX, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1186/s12885-017-3078-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5297018PMC
February 2017

The potential of imaging techniques as a screening tool for colorectal cancer: a cost-effectiveness analysis.

Br J Radiol 2016 Jul 19;89(1063):20150910. Epub 2016 May 19.

1 Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, Netherlands.

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http://dx.doi.org/10.1259/bjr.20150910DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5257302PMC
July 2016

The Melanoma MAICare Framework: A Microsimulation Model for the Assessment of Individualized Cancer Care.

Cancer Inform 2016 15;15:115-27. Epub 2016 Jun 15.

Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, the Netherlands.

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http://dx.doi.org/10.4137/CIN.S38122DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4912231PMC
June 2016

Oncogenic Role of miR-15a-3p in 13q Amplicon-Driven Colorectal Adenoma-to-Carcinoma Progression.

PLoS One 2015 6;10(7):e0132495. Epub 2015 Jul 6.

Department of Pathology, VU University Medical Center, Amsterdam, the Netherlands; Department of Pathology, The Netherlands Cancer Institute, Amsterdam, the Netherlands.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0132495PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4492490PMC
April 2016

Glucose Transporter 1 (SLC2A1) and Vascular Endothelial Growth Factor A (VEGFA) Predict Survival After Resection of Colorectal Cancer Liver Metastasis.

Ann Surg 2016 Jan;263(1):138-45

*Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands †Department of Radiology and Nuclear Medicine, VU University Medical Center, Amsterdam, The Netherlands ‡Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, The Netherlands §Department of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1097/SLA.0000000000001109DOI Listing
January 2016

Long-Term Impact of the Dutch Colorectal Cancer Screening Program on Cancer Incidence and Mortality-Model-Based Exploration of the Serrated Pathway.

Cancer Epidemiol Biomarkers Prev 2016 Jan 23;25(1):135-44. Epub 2015 Nov 23.

Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, the Netherlands.

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http://dx.doi.org/10.1158/1055-9965.EPI-15-0592DOI Listing
January 2016

Serrated neoplasia-role in colorectal carcinogenesis and clinical implications.

Nat Rev Gastroenterol Hepatol 2015 Jul 12;12(7):401-9. Epub 2015 May 12.

Department of Gastroenterology and Hepatology, Academic Medical Centre, Meibergdreef 9, Amsterdam, 1105AZ, Netherlands.

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http://www.nature.com/articles/nrgastro.2015.73
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http://dx.doi.org/10.1038/nrgastro.2015.73DOI Listing
July 2015

[Colorectal carcinoma in the Netherlands: the situation before and after population surveillance].

Ned Tijdschr Geneeskd 2014 ;158:A7699

Integraal Kankercentrum Nederland, Utrecht.

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April 2015

Semi-supervised adaptive-height snipping of the hierarchical clustering tree.

BMC Bioinformatics 2015 Jan 16;16:15. Epub 2015 Jan 16.

Department of Epidemiology and Biostatistics, VU University Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1186/s12859-014-0448-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4302100PMC
January 2015

FocalCall: An R Package for the Annotation of Focal Copy Number Aberrations.

Cancer Inform 2014 1;13:153-6. Epub 2014 Dec 1.

Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands.

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http://journals.sagepub.com/doi/10.4137/CIN.S19519
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http://dx.doi.org/10.4137/CIN.S19519DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4251178PMC
December 2014

Focal chromosomal copy number aberrations in cancer-Needles in a genome haystack.

Biochim Biophys Acta 2014 Nov 7;1843(11):2698-2704. Epub 2014 Aug 7.

Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.bbamcr.2014.08.001DOI Listing
November 2014

Nontemplated nucleotide additions distinguish the small RNA composition in cells from exosomes.

Cell Rep 2014 Sep 18;8(6):1649-1658. Epub 2014 Sep 18.

Department of Pathology, VU University Medical Center, 1007MB Amsterdam, the Netherlands; Exosomes Research Group, VU University Medical Center, 1007MB Amsterdam, the Netherlands. Electronic address:

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http://www.cell.com/cell-reports/pdf/S2211-1247(14)00703-7.p
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http://linkinghub.elsevier.com/retrieve/pii/S221112471400703
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http://dx.doi.org/10.1016/j.celrep.2014.08.027DOI Listing
September 2014

Modeling the Adenoma and Serrated pathway to Colorectal CAncer (ASCCA).

Risk Anal 2014 May 31;34(5):889-910. Epub 2013 Oct 31.

VU University Medical Center, Amsterdam, the Netherlands.

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http://dx.doi.org/10.1111/risa.12137DOI Listing
May 2014

Proteomics of differential extraction fractions enriched for chromatin-binding proteins from colon adenoma and carcinoma tissues.

Biochim Biophys Acta 2014 May 17;1844(5):1034-43. Epub 2013 Dec 17.

OncoProteomics Laboratory, Dept. of Medical Oncology, VU University Medical Center, De Boelelaan 1117, 1081HV Amsterdam, The Netherlands. Electronic address:

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http://ac.els-cdn.com/S1570963913004287/1-s2.0-S157096391300
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http://linkinghub.elsevier.com/retrieve/pii/S157096391300428
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http://dx.doi.org/10.1016/j.bbapap.2013.12.006DOI Listing
May 2014

Gene-dosage dependent overexpression at the 13q amplicon identifies DIS3 as candidate oncogene in colorectal cancer progression.

Genes Chromosomes Cancer 2014 Apr 29;53(4):339-48. Epub 2014 Jan 29.

Department of Pathology, VU University Medical Center, PO Box 7057, 1007MB, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1002/gcc.22144DOI Listing
April 2014

Colorectal cancer candidate biomarkers identified by tissue secretome proteome profiling.

J Proteomics 2014 Mar 10;99:26-39. Epub 2014 Jan 10.

Department of Pathology (Tumor Profiling Unit), VU University Medical Center, Amsterdam, The Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.jprot.2014.01.001DOI Listing
March 2014

The future of colorectal cancer: implications of screening.

Gut 2013 Oct 8;62(10):1387-9. Epub 2013 Jun 8.

Department of Medical Oncology, VU University Medical Center, , Amsterdam, The Netherlands.

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http://dx.doi.org/10.1136/gutjnl-2013-305023DOI Listing
October 2013

Tracking the molecular features of nonpolypoid colorectal neoplasms: a systematic review and meta-analysis.

Am J Gastroenterol 2013 Jul 7;108(7):1042-56. Epub 2013 May 7.

Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1038/ajg.2013.126DOI Listing
July 2013

Proteomics in colorectal cancer translational research: biomarker discovery for clinical applications.

Clin Biochem 2013 Apr 13;46(6):466-79. Epub 2012 Nov 13.

Department of Medical Oncology, OncoProteomics Laboratory, VU University Medical Center, Amsterdam, the Netherlands.

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https://linkinghub.elsevier.com/retrieve/pii/S00099120120062
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http://dx.doi.org/10.1016/j.clinbiochem.2012.10.039DOI Listing
April 2013

Detection limits of DNA copy number alterations in heterogeneous cell populations.

Cell Oncol (Dordr) 2013 Feb 2;36(1):27-36. Epub 2012 Nov 2.

Department of Pathology, VU University Medical Center, MB, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1007/s13402-012-0108-2DOI Listing
February 2013

Focal aberrations indicate EYA2 and hsa-miR-375 as oncogene and tumor suppressor in cervical carcinogenesis.

Genes Chromosomes Cancer 2013 Jan 14;52(1):56-68. Epub 2012 Sep 14.

Department of Pathology, VU University Medical Center, Amsterdam, The Netherlands.

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http://doi.wiley.com/10.1002/gcc.22006
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http://dx.doi.org/10.1002/gcc.22006DOI Listing
January 2013

Alternative cleavage and polyadenylation during colorectal cancer development.

Clin Cancer Res 2012 Oct 8;18(19):5256-66. Epub 2012 Aug 8.

The Netherlands Cancer Institute, The Netherlands.

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http://dx.doi.org/10.1158/1078-0432.CCR-12-0543DOI Listing
October 2012

Chromosome 5q loss in colorectal flat adenomas.

Clin Cancer Res 2012 Sep 3;18(17):4560-9. Epub 2012 Jul 3.

Departments of Pathology, Epidemiology and Biostatistics, Gynaecology, and Gastroenterology, VU University Medical Center, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1158/1078-0432.CCR-11-2385DOI Listing
September 2012

Interval cancers after colonoscopy-insights and recommendations.

Nat Rev Gastroenterol Hepatol 2012 Sep 21;9(9):550-4. Epub 2012 Aug 21.

Division of Gastroenterology and Hepatology, Department of Internal Medicine, Maastricht University Medical Center, PO Box 5800, 6202 AZ, Maastricht, The Netherlands.

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http://dx.doi.org/10.1038/nrgastro.2012.136DOI Listing
September 2012

Carcinoma origin dictates differential skewing of monocyte function.

Oncoimmunology 2012 Sep;1(6):798-809

Department of Surgery; VU University Medical Center; Amsterdam, The Netherlands ; Department of Molecular Cell Biology and Immunology; VU University Medical Center; Amsterdam, The Netherlands.

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http://dx.doi.org/10.4161/onci.20427DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3489735PMC
September 2012

Cell cycle proteins predict recurrence in stage II and III colon cancer.

Ann Surg Oncol 2012 Jul 4;19 Suppl 3:S682-92. Epub 2012 Feb 4.

Department of Surgery, VU University Medical Centre, Amsterdam, The Netherlands.

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http://dx.doi.org/10.1245/s10434-012-2216-7DOI Listing
July 2012

[Consent for the secondary use of human residual tissue: the patient is best served by an 'opting-out' procedure].

Ned Tijdschr Geneeskd 2012 ;156(21):A4485

Nederlands Kanker Instituut-Antoni van Leeuwenhoek Ziekenhuis, Amsterdam.

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July 2012

Promoter CpG island methylation markers in colorectal cancer: the road ahead.

Epigenomics 2012 Apr;4(2):179-94

Department of Pathology, GROW-School for Oncology & Developmental Biology, Maastricht University Medical Center, Maastricht, The Netherlands.

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http://dx.doi.org/10.2217/epi.12.9DOI Listing
April 2012