George E Liu

George E Liu

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George E Liu

George E Liu

Publications by authors named "George E Liu"

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LncRNA-MEG3 promotes bovine myoblast differentiation by sponging miR-135.

J Cell Physiol 2019 Aug 18;234(10):18361-18370. Epub 2019 Mar 18.

College of Animal Science and Technology, Northwest A&F University, Shaanxi Key Laboratory of Molecular Biology for Agriculture, Yangling, Shaanxi, China.

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http://dx.doi.org/10.1002/jcp.28469DOI Listing
August 2019

Genome-wide CNV analysis revealed variants associated with growth traits in African indigenous goats.

Genomics 2019 Aug 23. Epub 2019 Aug 23.

Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, MD 20705, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2019.08.018DOI Listing
August 2019

Bos taurus-indicus hybridization correlates with intralocus sexual-conflict effects of PRDM9 on male and female fertility in Holstein cattle.

BMC Genet 2019 08 28;20(1):71. Epub 2019 Aug 28.

Animal Genomics and Improvement Laboratory, BARC, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.

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http://dx.doi.org/10.1186/s12863-019-0773-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6714232PMC
August 2019

Genomic Analysis Reveals Specific Patterns of Homozygosity and Heterozygosity in Inbred Pigs.

Animals (Basel) 2019 Jun 1;9(6). Epub 2019 Jun 1.

Key Laboratory of Farm Animal Genetic Resources and Utilization of Ministry of Agriculture, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing 100193, China.

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http://dx.doi.org/10.3390/ani9060314DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6617223PMC
June 2019

Genome-wide scan reveals genetic divergence and diverse adaptive selection in Chinese local cattle.

BMC Genomics 2019 Jun 14;20(1):494. Epub 2019 Jun 14.

Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, China.

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http://dx.doi.org/10.1186/s12864-019-5822-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6570941PMC
June 2019

Comparative sequence alignment reveals River Buffalo genomic structural differences compared with cattle.

Genomics 2019 05 6;111(3):418-425. Epub 2018 Mar 6.

The Animal Genomics and Improvement Laboratory, USDA ARS, Beltsville, MD, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2018.02.018DOI Listing
May 2019

Copy number variation of bovine SHH gene is associated with body conformation traits in Chinese beef cattle.

J Appl Genet 2019 May 17;60(2):199-207. Epub 2019 Apr 17.

College of Animal Science and Technology, Shaanxi Key Laboratory of Molecular Biology for Agriculture, Northwest A&F University, No. 22 Xinong Road, Yangling, 712100, Shaanxi, People's Republic of China.

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http://dx.doi.org/10.1007/s13353-019-00496-wDOI Listing
May 2019

Statistical Detection of Genome Differences Based on CNV Segments.

Methods Mol Biol 2018 ;1833:49-59

Animal Genomics and Improvement Laboratory, USDA ARS, Beltsville, MD, USA.

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http://dx.doi.org/10.1007/978-1-4939-8666-8_3DOI Listing
March 2019

Analysis of Population-Genetic Properties of Copy Number Variations.

Methods Mol Biol 2018 ;1833:179-186

Animal Genomics and Improvement Laboratory, USDA ARS, Beltsville, MD, USA.

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http://dx.doi.org/10.1007/978-1-4939-8666-8_14DOI Listing
March 2019

Array CGH-based detection of CNV regions and their potential association with reproduction and other economic traits in Holsteins.

BMC Genomics 2019 Mar 7;20(1):181. Epub 2019 Mar 7.

Animal Genomics and Improvement Laboratory, BARC, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA.

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http://dx.doi.org/10.1186/s12864-019-5552-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6407259PMC
March 2019

Genetic and epigenetic architecture of paternal origin contribute to gestation length in cattle.

Commun Biol 2019 14;2:100. Epub 2019 Mar 14.

1Department of Animal and Avian Sciences, University of Maryland, College Park, MD 20742 USA.

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http://dx.doi.org/10.1038/s42003-019-0341-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6418173PMC
March 2019

Genome changes due to artificial selection in U.S. Holstein cattle.

BMC Genomics 2019 Feb 11;20(1):128. Epub 2019 Feb 11.

Department of Animal Science, University of Minnesota, Saint Paul, MN, USA.

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http://dx.doi.org/10.1186/s12864-019-5459-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371544PMC
February 2019

A genome-wide association study for mastitis resistance in phenotypically well-characterized Holstein dairy cattle using a selective genotyping approach.

Immunogenetics 2019 01 30;71(1):35-47. Epub 2018 Sep 30.

Department of Animal, Dairy and Veterinary Sciences, Utah State University, Logan, UT, USA.

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http://dx.doi.org/10.1007/s00251-018-1088-9DOI Listing
January 2019

Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle.

BMC Genomics 2019 Jan 10;20(1):31. Epub 2019 Jan 10.

Innovation Team of Cattle Genetic Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.

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https://bmcgenomics.biomedcentral.com/articles/10.1186/s1286
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http://dx.doi.org/10.1186/s12864-018-5403-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6327516PMC
January 2019

Genetic assessment of inbred chicken lines indicates genomic signatures of resistance to Marek's disease.

J Anim Sci Biotechnol 2018 13;9:65. Epub 2018 Sep 13.

1Department of Animal & Avian Sciences, University of Maryland, College Park, MD 20742 USA.

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http://dx.doi.org/10.1186/s40104-018-0281-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6136188PMC
September 2018

Diversity of copy number variation in a worldwide population of sheep.

Genomics 2018 05 14;110(3):143-148. Epub 2017 Sep 14.

Animal Genomics and Improvement Laboratory, Agricultural Research Service, USDA, Beltsville, MD 20705, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2017.09.005DOI Listing
May 2018

Genome-wide copy number variant analysis reveals variants associated with 10 diverse production traits in Holstein cattle.

BMC Genomics 2018 May 2;19(1):314. Epub 2018 May 2.

Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, 10300 Baltimore Avenue, Bldg. 306, BARC-East, Beltsville, MD, 20705, USA.

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http://dx.doi.org/10.1186/s12864-018-4699-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930521PMC
May 2018

Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization.

Gigascience 2018 05;7(5)

National Engineering Laboratory for Animal Breeding; Key Laboratory of Animal Genetics, Breeding, and Reproduction, Ministry of Agriculture; College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.

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https://academic.oup.com/gigascience/article/doi/10.1093/gig
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http://dx.doi.org/10.1093/gigascience/giy058DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6007440PMC
May 2018

The essence of appetite: does olfactory receptor variation play a role?

J Anim Sci 2018 Apr;96(4):1551-1558

USDA, Agricultural Research Service, Animal Genomics and Improvement Laboratory, Beltsville, MD.

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http://dx.doi.org/10.1093/jas/sky068DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6140904PMC
April 2018

Characterization of recombination features and the genetic basis in multiple cattle breeds.

BMC Genomics 2018 Apr 27;19(1):304. Epub 2018 Apr 27.

Department of Animal and Avian Sciences, University of Maryland, 2123 Animal Science Building, College Park, MD, 20742, USA.

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http://dx.doi.org/10.1186/s12864-018-4705-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5923192PMC
April 2018

Correction to: Analysis of Population-Genetic Properties of Copy Number Variations.

Methods Mol Biol 2018 ;1833:E1

Animal Genomics and Improvement Laboratory, USDA ARS, Beltsville, MD, USA.

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http://dx.doi.org/10.1007/978-1-4939-8666-8_17DOI Listing
January 2018

Genome-wide analysis reveals differential selection involved with copy number variation in diverse Chinese Cattle.

Sci Rep 2017 10 30;7(1):14299. Epub 2017 Oct 30.

Laboratory of Molecular Biology and Bovine Breeding, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China.

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http://dx.doi.org/10.1038/s41598-017-14768-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5662686PMC
October 2017

Characterization of Copy Number Variation's Potential Role in Marek's Disease.

Int J Mol Sci 2017 May 9;18(5). Epub 2017 May 9.

Department of Animal & Avian Sciences, University of Maryland, College Park, MD 20742, USA.

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http://dx.doi.org/10.3390/ijms18051020DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5454933PMC
May 2017

CNV Analysis of Host Responses to Porcine Reproductive and Respiratory Syndrome Virus Infection.

J Genomics 2017 24;5:58-63. Epub 2017 May 24.

Animal Genomics and Improvement Laboratory, BARC, USDA-ARS, Beltsville, Maryland 20705, USA.

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http://dx.doi.org/10.7150/jgen.20358DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457943PMC
May 2017

Ruminant-specific multiple duplication events of PRDM9 before speciation.

BMC Evol Biol 2017 03 14;17(1):79. Epub 2017 Mar 14.

Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.

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http://dx.doi.org/10.1186/s12862-017-0892-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5351255PMC
March 2017

CNV discovery for milk composition traits in dairy cattle using whole genome resequencing.

BMC Genomics 2017 03 29;18(1):265. Epub 2017 Mar 29.

Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing, 100193, China.

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http://dx.doi.org/10.1186/s12864-017-3636-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5371188PMC
March 2017

Transcriptomic Profiling of Spleen in Grass-Fed and Grain-Fed Angus Cattle.

PLoS One 2015 14;10(9):e0135670. Epub 2015 Sep 14.

Department of Animal & Avian Sciences, University of Maryland, College Park, Maryland, 20742, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0135670PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4569079PMC
June 2016

Population-genetic properties of differentiated copy number variations in cattle.

Sci Rep 2016 Mar 23;6:23161. Epub 2016 Mar 23.

Animal Genomics and Improvement Laboratory, Agricultural Research Service, USDA, Beltsville, Maryland 20705, USA.

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http://dx.doi.org/10.1038/srep23161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4804293PMC
March 2016

Cattle Sex-Specific Recombination and Genetic Control from a Large Pedigree Analysis.

PLoS Genet 2015 Nov 5;11(11):e1005387. Epub 2015 Nov 5.

Animal Genomics and Improvement Laboratory, Agricultural Research Service, United States Department of Agriculture (USDA), Beltsville, Maryland, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1005387DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4634960PMC
November 2015

Copy number variation-based genome wide association study reveals additional variants contributing to meat quality in Swine.

Sci Rep 2015 Aug 3;5:12535. Epub 2015 Aug 3.

Key Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture of China, Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100193, China.

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http://dx.doi.org/10.1038/srep12535DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4522650PMC
August 2015

RAPTR-SV: a hybrid method for the detection of structural variants.

Bioinformatics 2015 Jul 16;31(13):2084-90. Epub 2015 Feb 16.

Animal Genomics and Improvement Laboratory, ARS, USDA, Beltsville, MD 20705, USA, Department of Animal and Avian Sciences, University of Maryland, College Park, MD 20705, USA, Division of Animal Sciences, University of Missouri, Columbia, MO 65211, USA and Department of Animal Science, Iowa State University, Ames, IA 50011, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btv086DOI Listing
July 2015

Co-expression analysis of fetal weight-related genes in ovine skeletal muscle during mid and late fetal development stages.

Int J Biol Sci 2014 11;10(9):1039-50. Epub 2014 Sep 11.

1. National Center for Molecular Genetics and Breeding of Animal, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, China;

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http://dx.doi.org/10.7150/ijbs.9737DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4183924PMC
May 2015

Genomic signatures reveal new evidences for selection of important traits in domestic cattle.

Mol Biol Evol 2015 Mar 26;32(3):711-25. Epub 2014 Nov 26.

Animal Genomics and Improvement Laboratory, Agricultural Research Service, USDA, Beltsville, MD 20705, USA

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http://dx.doi.org/10.1093/molbev/msu333DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4441790PMC
March 2015

Transcriptome profiling of CTLs regulated by rapamycin using RNA-Seq.

Immunogenetics 2014 Nov 13;66(11):625-33. Epub 2014 Aug 13.

Department of Animal and Avian Sciences, University of Maryland, College Park, MD, 20742, USA.

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http://dx.doi.org/10.1007/s00251-014-0790-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4198470PMC
November 2014

The challenges and importance of structural variation detection in livestock.

Front Genet 2014 18;5:37. Epub 2014 Feb 18.

Bovine Functional Genomics Laboratory, United States Department of Agriculture-Agricultural Research Service Beltsville, MD, USA.

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http://dx.doi.org/10.3389/fgene.2014.00037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3927395PMC
June 2014

A genome-wide survey reveals a deletion polymorphism associated with resistance to gastrointestinal nematodes in Angus cattle.

Funct Integr Genomics 2014 Jun 10;14(2):333-9. Epub 2014 Apr 10.

GEL: Bovine Functional Genomics Laboratory, BARC, USDA-ARS, Building 306, Room 111, BARC-East, Beltsville, MD, 20705, USA.

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http://link.springer.com/10.1007/s10142-014-0371-6
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http://dx.doi.org/10.1007/s10142-014-0371-6DOI Listing
June 2014

Transcriptional profiling of mammary gland in Holstein cows with extremely different milk protein and fat percentage using RNA sequencing.

BMC Genomics 2014 Mar 24;15:226. Epub 2014 Mar 24.

Key Laboratory of Animal Genetics and Breeding of Ministry of Agriculture, National Engineering Laboratory of Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-15-226DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3998192PMC
March 2014

Genomic divergence of zebu and taurine cattle identified through high-density SNP genotyping.

BMC Genomics 2013 Dec 13;14:876. Epub 2013 Dec 13.

Animal Genetics Laboratory, The University of Queensland, School of Veterinary Science, Gatton, QLD 4343, Australia.

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http://dx.doi.org/10.1186/1471-2164-14-876DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4046821PMC
December 2013

Comparative Analysis of CNV Calling Algorithms: Literature Survey and a Case Study Using Bovine High-Density SNP Data.

Microarrays (Basel) 2013 Jun 25;2(3):171-85. Epub 2013 Jun 25.

Bovine Functional Genomics Laboratory, BARC, BA, USDA-ARS, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.3390/microarrays2030171DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5003459PMC
June 2013

Identification of candidate transcription factor binding sites in the cattle genome.

Genomics Proteomics Bioinformatics 2013 Jun 1;11(3):195-8. Epub 2013 Feb 1.

Bovine Functional Genomics Laboratory, United States Department of Agriculture, Agricultural Research Service USDA-ARS, Beltsville Agricultural Research Service, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1016/j.gpb.2012.10.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4357788PMC
June 2013

Butyrate Induced IGF2 Activation Correlated with Distinct Chromatin Signatures Due to Histone Modification.

Gene Regul Syst Bio 2013 26;7:57-70. Epub 2013 Mar 26.

Lieber Institute for Brain Development, Johns Hopkins University, Baltimore, Maryland, United States of America.

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http://dx.doi.org/10.4137/GRSB.S11243DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3623616PMC
May 2013

Copy number variation in the cattle genome.

Funct Integr Genomics 2012 Nov 13;12(4):609-24. Epub 2012 Jul 13.

Bovine Functional Genomics Laboratory, USDA-ARS, ANRI, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s10142-012-0289-9DOI Listing
November 2012

Analysis of copy number variations in Holstein cows identify potential mechanisms contributing to differences in residual feed intake.

Funct Integr Genomics 2012 Nov 19;12(4):717-23. Epub 2012 Sep 19.

Bovine Functional Genomics Laboratory, ANRI, USDA-ARS, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s10142-012-0295-yDOI Listing
November 2012

Genomic regions showing copy number variations associate with resistance or susceptibility to gastrointestinal nematodes in Angus cattle.

Funct Integr Genomics 2012 Mar 18;12(1):81-92. Epub 2011 Sep 18.

Bovine Functional Genomics Laboratory, ANRI, USDA-ARS, Building 200, Room 124B, BARC-East, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s10142-011-0252-1DOI Listing
March 2012

Refinement of Bos taurus sequence assembly based on BAC-FISH experiments.

BMC Genomics 2011 Dec 30;12:639. Epub 2011 Dec 30.

Department of Biology, University of Bari, Via Orabona 4, 70125 Bari, Italy.

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http://dx.doi.org/10.1186/1471-2164-12-639DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268123PMC
December 2011

Recent applications of DNA sequencing technologies in food, nutrition and agriculture.

Authors:
George E Liu

Recent Pat Food Nutr Agric 2011 Sep;3(3):187-95

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville Agricultural Research Center - East, 10300 Baltimore Avenue, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.2174/2212798411103030187DOI Listing
September 2011

Initial analysis of copy number variations in cattle selected for resistance or susceptibility to intestinal nematodes.

Mamm Genome 2011 Feb 3;22(1-2):111-21. Epub 2010 Dec 3.

Bovine Functional Genomics Laboratory, U.S. Department of Agriculture-Agricultural Research Service, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1007/s00335-010-9308-0DOI Listing
February 2011

Analysis of recent segmental duplications in the bovine genome.

BMC Genomics 2009 Dec 1;10:571. Epub 2009 Dec 1.

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville, Maryland 20705, USA.

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http://dx.doi.org/10.1186/1471-2164-10-571DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2796684PMC
December 2009

Calibration of mutation rates reveals diverse subfamily structure of galliform CR1 repeats.

Genome Biol Evol 2009 May 27;1:119-30. Epub 2009 May 27.

Bovine Functional Genomics Laboratory, Animal and Natural Resources Institute, Agricultural Research Service, United States Department of Agriculture, Beltsville, Maryland, USA.

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http://dx.doi.org/10.1093/gbe/evp014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2817409PMC
May 2009

Alternative splicing variants and DNA methylation status of BDNF in inbred chicken lines.

Brain Res 2009 May 6;1269:1-10. Epub 2009 Mar 6.

Department of Animal and Avian Sciences, University of Maryland, College Park, MD 20742, USA.

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http://dx.doi.org/10.1016/j.brainres.2009.01.071DOI Listing
May 2009

Comparative analysis of Alu repeats in primate genomes.

Genome Res 2009 May;19(5):876-85

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1101/gr.083972.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2675976PMC
May 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

Applications and case studies of the next-generation sequencing technologies in food, nutrition and agriculture.

Authors:
George E Liu

Recent Pat Food Nutr Agric 2009 Jan;1(1):75-9

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville Agricultural Research Center (BARC) - East, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.2174/2212798410901010075DOI Listing
January 2009

Identification of conserved regulatory elements in mammalian promoter regions: a case study using the PCK1 promoter.

Genomics Proteomics Bioinformatics 2008 Dec;6(3-4):129-43

Bovine Functional Genomics Laboratory, Beltsville Agricultural Research Center, Beltsville, MD 20705, USA.

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http://dx.doi.org/10.1016/S1672-0229(09)60001-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054123PMC
December 2008

Genome resources and comparative analysis tools for cardiovascular research.

Methods Mol Med 2006 ;128:101-23

Bovine Functional Genomics Laboratory, Animal and Natural Resources Institute, US Department of Agriculture-Agriculture Research Service, Beltsville, MD, USA.

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http://dx.doi.org/10.1007/978-1-59745-159-8_8DOI Listing
December 2006

Genomic divergences among cattle, dog and human estimated from large-scale alignments of genomic sequences.

BMC Genomics 2006 Jun 7;7:140. Epub 2006 Jun 7.

USDA, ARS, ANRI, Bovine Functional Genomics Laboratory, Beltsville Agricultural Research Center (BARC)-East, 10300 Baltimore Avenue, Beltsville, MD 20705, USA.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-7-140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1525190PMC
June 2006