Gavin R Oliver

Gavin R Oliver

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Gavin R Oliver

Gavin R Oliver

Publications by authors named "Gavin R Oliver"

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24Publications

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Development and Verification of an RNA Sequencing (RNA-Seq) Assay for the Detection of Gene Fusions in Tumors.

J Mol Diagn 2018 07 19;20(4):495-511. Epub 2018 Jun 19.

Department of Laboratory Medicine and Pathology, Divisions of Laboratory Genetics and Experimental Pathology, Mayo Clinic, Rochester, Minnesota. Electronic address:

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http://dx.doi.org/10.1016/j.jmoldx.2018.03.007DOI Listing
July 2018

Assessing Human Genetic Variations in Glucose Transporter SLC2A10 and Their Role in Altering Structural and Functional Properties.

Front Genet 2018 25;9:276. Epub 2018 Jul 25.

Department of Health Science Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, United States.

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http://dx.doi.org/10.3389/fgene.2018.00276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6068234PMC
July 2018

Molecular Modeling and Functional Analysis of Exome Sequencing-Derived Variants of Unknown Significance Identify a Novel, Constitutively Active FGFR2 Mutant in Cholangiocarcinoma.

JCO Precis Oncol 2017 1;2017. Epub 2017 Aug 1.

David L. Marks, Tara L. Hogenson, Anne M. Vrabel, Ashley N. Sigafoos, Ezequiel J. Tolosa, Ryan M. Carr, Stephanie L. Safgren, Elisa Enriquez Hesles, Luciana L. Almada, Paola A. Romecin-Duran, Eriko Iguchi, Aryan Ala'Aldeen, Jean-Pierre A. Kocher, Gavin R. Oliver, Naresh Prodduturi, David W. Mead, Asif Hossain, Norine E. Huneke, Colleen M. Tagtow, Sikander Ailawadhi, Stephen M. Ansell, Michaela S. Banck, Asher A. Chanan-Khan, Ronald S. Go, Thorvardur R. Halfdanarson, Richard W. Joseph, Prashant Kapoor, Aaron S. Mansfield, Amulya A. Nageswara Rao, Grzegorz S. Nowakowski, Animesh Pardanani, Sameer A. Parikh, John C. Cheville, Andrew L. Feldman, Ramesh K. Ramanathan, Steven I. Robinson, Heidi D. Finnes, Jennifer B. McCormick, Robert R. McWilliams, Aminah Jatoi, Mrinal M. Patnaik, Eric D. Wieben, Tammy M. McAllister, Kandelaria M. Rumilla, Sarah E. Kerr, Konstantinos N. Lazaridis, Gianrico Farrugia, Karl J. Clark, Eric W. Klee, and Martin E. Fernandez-Zapico, Mayo Clinic, Rochester; Ernesto Resnik, Bio-Techne, Minneapolis, MN; Sikander Ailawadhi, Asher A. Chanan-Khan, and Richard W. Joseph, Mayo Clinic, Jacksonville, FL; Jan B. Egan, Alan H. Bryce, Estrella M. Carballido, KellyK. Curtis, Chelsea D. Gawryletz, Thai H. Ho,Nathalie Meurice, Ramesh K. Ramanathan, Raoul Tibes, Alvin C. Silva, A. Keith Stewart, and Mitesh J. Borad, Mayo Clinic, Phoenix, AZ; and Eileen J. Kennedy, University of Georgia, Athens, GA.

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http://dx.doi.org/10.1200/PO.17.00018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369924PMC
August 2017

"The molecule's the thing:" the promise of molecular modeling and dynamic simulations in aiding the prioritization and interpretation of genomic testing results.

F1000Res 2016 27;5:766. Epub 2016 Apr 27.

Center for Individualized Medicine, Mayo Clinic, Rochester, MN, 55905, USA; Laboratory of Epigenetics and Chromatin Dynamics, Epigenomics Translational Program, Gastroenterology Research Unit, Departments of Biochemistry and Molecular Biology, Biophysics, and Medicine, Mayo Clinic, Rochester, MN, 55905, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4920209PMC
http://dx.doi.org/10.12688/f1000research.8600.3DOI Listing
August 2016

The Hedgehog pathway as targetable vulnerability with 5-azacytidine in myelodysplastic syndrome and acute myeloid leukemia.

J Hematol Oncol 2015 Oct 20;8:114. Epub 2015 Oct 20.

Division of Hematology and Medical Oncology, Mayo Clinic/Mayo Clinic Cancer Center, 13400 E. Shea Boulevard, Scottsdale, AZ, 85259, USA.

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http://dx.doi.org/10.1186/s13045-015-0211-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615363PMC
October 2015

PANDA: pathway and annotation explorer for visualizing and interpreting gene-centric data.

PeerJ 2015 19;3:e970. Epub 2015 May 19.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.7717/peerj.970DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4451017PMC
June 2015

Bioinformatics for clinical next generation sequencing.

Clin Chem 2015 Jan 1;61(1):124-35. Epub 2014 Dec 1.

Department of Health Sciences Research, Mayo Clinic, Rochester, MN.

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http://dx.doi.org/10.1373/clinchem.2014.224360DOI Listing
January 2015

PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data.

Bioinformatics 2014 Sep 29;30(18):2678-80. Epub 2014 May 29.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Division of Epidemiology, Department of Health Sciences Research, Division of Hematology, Department of Internal Medicine, Mayo Clinic, 200 First Street SW, Rochester, MN 55905 and Department of Health Sciences Research, Mayo Clinic, 4500 San Pablo Road South, Jacksonville, FL 32224, USA.

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http://dx.doi.org/10.1093/bioinformatics/btu363DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4155258PMC
September 2014

Long-range transcriptome sequencing reveals cancer cell growth regulatory chimeric mRNA.

Neoplasia 2012 Nov;14(11):1087-96

Unit of Cancer Pathology, Centre of Excellence for Research on Aging, G. D'Annunzio University Foundation, Chieti, Italy.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3514740PMC
http://dx.doi.org/10.1593/neo.121342DOI Listing
November 2012

A smooth muscle tone-dependent stretch-activated migrating motor pattern in isolated guinea-pig distal colon.

J Physiol 2003 Sep 7;551(Pt 3):955-69. Epub 2003 Jul 7.

Department of Physiology and Cell Biology, University of Nevada School of Medicine, Reno, NV 89557, USA.

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http://dx.doi.org/10.1113/jphysiol.2003.049163DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2343286PMC
September 2003