Publications by authors named "Gaurav Pandey"

97Publications

Tumor-associated macrophages in solid tumor: friend or foe.

Authors:
Gaurav Pandey

Ann Transl Med 2020 Aug;8(16):1027

Department of Radiation Oncology, Centre for Human Immunology and Immunotherapy Programs, Washington University School of Medicine, St. Louis, MO, USA. (Email:

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http://dx.doi.org/10.21037/atm-2020-tam-05DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7475470PMC
August 2020

Invasive and non-invasive therapies for Alzheimer's disease and other amyloidosis.

Biophys Rev 2020 Sep 15. Epub 2020 Sep 15.

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, 781039, India.

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http://dx.doi.org/10.1007/s12551-020-00752-yDOI Listing
September 2020

Ultrasonic atomizer based development of pH sensor for real time analysis.

Sci Rep 2020 Jul 2;10(1):10910. Epub 2020 Jul 2.

Room No. SB-216, Discipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Khandwa Road, Simrol, Indore, Madhya Pradesh, 453552, India.

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http://dx.doi.org/10.1038/s41598-020-68005-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7331635PMC
July 2020

Analysis of Organ Utilization From Deceased Organ Donation in India.

Transplant Proc 2020 Jul - Aug;52(6):1647-1649. Epub 2020 Jun 20.

Department of Renal Transplant Surgery, Nehru Building, Post Graduate Institute of Medical Education and Research, Chandigarh, India. Electronic address:

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http://dx.doi.org/10.1016/j.transproceed.2020.02.134DOI Listing
June 2020

Experience With 15 Years of Laparoscopic Donor Nephrectomy: Review of 2500 Cases.

Transplant Proc 2020 Jul - Aug;52(6):1671-1674. Epub 2020 May 21.

Department of Renal Transplant Surgery, Post Graduate Institute of Medical Education and Research, Chandigarh, India. Electronic address:

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http://dx.doi.org/10.1016/j.transproceed.2020.03.016DOI Listing
May 2020

Reasons for Low Utilization of Pancreas for Transplantation From Deceased Donors: Analysis of Data From a Single Center in India.

Transplant Proc 2020 Jul - Aug;52(6):1858-1859. Epub 2020 May 17.

Department of Renal Transplant Surgery, Nehru Building, Post Graduate Institute of Medical Education and Research, Chandigarh, India. Electronic address:

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http://dx.doi.org/10.1016/j.transproceed.2020.04.002DOI Listing
May 2020

Risk for Delayed Graft Function in Deceased Donor Renal Transplant Patients: A Single-Center Experience From North India.

Transplant Proc 2020 Jul - Aug;52(6):1741-1743. Epub 2020 May 17.

Department of Renal Transplant Surgery, Nehru Building, Post Graduate Institute of Medical Education and Research, Chandigarh, India. Electronic address:

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http://dx.doi.org/10.1016/j.transproceed.2020.04.003DOI Listing
May 2020

Modulating Aβ Fibrillogenesis with 'Trojan' peptides.

Neuropeptides 2020 Jun 25;81:102030. Epub 2020 Feb 25.

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, -781039, India. Electronic address:

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http://dx.doi.org/10.1016/j.npep.2020.102030DOI Listing
June 2020

Modulation of tau protein aggregation using 'Trojan' sequences.

Biochim Biophys Acta Gen Subj 2020 Jul 27;1864(7):129569. Epub 2020 Feb 27.

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781039, India. Electronic address:

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http://dx.doi.org/10.1016/j.bbagen.2020.129569DOI Listing
July 2020

Directive effect of chain length in modulating peptide nano-assemblies.

Protein Pept Lett 2020 Feb 23. Epub 2020 Feb 23.

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati-781039, India.

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http://dx.doi.org/10.2174/0929866527666200224114627DOI Listing
February 2020

Nano-interfacial decoration of Halloysite Nanotubes for the development of antimicrobial nanocomposites.

Adv Colloid Interface Sci 2020 Jan 9;275:102063. Epub 2019 Nov 9.

Institute of Research & Development, Gujarat Forensic Sciences University, Sector 9, Near Police Bhawan, Gandhinagar 382007, Gujarat, India. Electronic address:

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http://dx.doi.org/10.1016/j.cis.2019.102063DOI Listing
January 2020

Application of student's -test, analysis of variance, and covariance.

Ann Card Anaesth 2019 Oct-Dec;22(4):407-411

Department of Gastroenterology, Sanjay Gandhi Post Graduate Institute of Medical Sciences, Lucknow, Uttar Pradesh, India.

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http://dx.doi.org/10.4103/aca.ACA_94_19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813708PMC
August 2020

NeTFactor, a framework for identifying transcriptional regulators of gene expression-based biomarkers.

Sci Rep 2019 09 10;9(1):12970. Epub 2019 Sep 10.

Icahn Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

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http://dx.doi.org/10.1038/s41598-019-49498-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6737052PMC
September 2019

ROR1 Potentiates FGFR Signaling in Basal-Like Breast Cancer.

Cancers (Basel) 2019 May 24;11(5). Epub 2019 May 24.

Department of Pathology, Immunology, and Laboratory Medicine, University of Florida, Gainesville, FL 32610, USA.

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http://dx.doi.org/10.3390/cancers11050718DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6562526PMC
May 2019

A Novel Technique of Dual Kidney Transplantation (DKT) From Adult Donors.

Urology 2019 Aug 30;130:201-204. Epub 2019 Apr 30.

Department of Renal Transplant Surgery, Postgraduate Institute of Medical Research and Education, Chandigarh, India. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00904295193038
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http://dx.doi.org/10.1016/j.urology.2019.04.025DOI Listing
August 2019

Fluorescent Biocompatible Platinum-Porphyrin-Doped Polymeric Hybrid Particles for Oxygen and Glucose Biosensing.

Sci Rep 2019 03 22;9(1):5029. Epub 2019 Mar 22.

Discipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Khandwa Road, Indore, 453552, India.

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http://dx.doi.org/10.1038/s41598-019-41326-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6430792PMC
March 2019

Objective risk stratification of prostate cancer using machine learning and radiomics applied to multiparametric magnetic resonance images.

Sci Rep 2019 02 7;9(1):1570. Epub 2019 Feb 7.

Department of Genetics and Genomic Sciences and Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

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http://www.nature.com/articles/s41598-018-38381-x
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http://dx.doi.org/10.1038/s41598-018-38381-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6367324PMC
February 2019

Deletion of insulin receptor in the proximal tubule and fasting augment albumin excretion.

J Cell Biochem 2019 06 15;120(6):10688-10696. Epub 2019 Jan 15.

Department of Molecular Medicine and Biotechnology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow, India.

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http://dx.doi.org/10.1002/jcb.28359DOI Listing
June 2019

Large-scale protein function prediction using heterogeneous ensembles.

F1000Res 2018 28;7. Epub 2018 Sep 28.

Department of Genetics and Genomic Sciences and Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.

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http://dx.doi.org/10.12688/f1000research.16415.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221071PMC
March 2019

Radiation Therapy Outcomes Models in the Era of Radiomics and Radiogenomics: Uncertainties and Validation.

Int J Radiat Oncol Biol Phys 2018 11 18;102(4):1070-1073. Epub 2018 Oct 18.

Department of Radiation Oncology, University of Michigan, Ann Arbor, Michigan.

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http://dx.doi.org/10.1016/j.ijrobp.2018.08.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7405918PMC
November 2018

Surface modified halloysite nanotubes: A flexible interface for biological, environmental and catalytic applications.

Adv Colloid Interface Sci 2018 Nov 4;261:82-101. Epub 2018 Sep 4.

Institute of Research & Development, Gujarat Forensic Sciences University, Sector 9, Near Police Bhawan, Gandhinagar, Gujarat, India. Electronic address:

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http://dx.doi.org/10.1016/j.cis.2018.09.001DOI Listing
November 2018

A Nasal Brush-based Classifier of Asthma Identified by Machine Learning Analysis of Nasal RNA Sequence Data.

Sci Rep 2018 06 11;8(1):8826. Epub 2018 Jun 11.

Icahn Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

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http://dx.doi.org/10.1038/s41598-018-27189-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5995932PMC
June 2018

Nanotechnology-based recent approaches for sensing and remediation of pesticides.

J Environ Manage 2018 Jan 20;206:749-762. Epub 2017 Nov 20.

Gujarat Environment Management Institute, Department of Forest and Environment, Sector 10B, Dr. Jivraj Mehta Bhawan, Gandhinagar, Gujarat, India.

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http://dx.doi.org/10.1016/j.jenvman.2017.11.037DOI Listing
January 2018

Using machine learning to identify air pollution exposure profiles associated with early cognitive skills among U.S. children.

Environ Pollut 2017 Nov 18;230:730-740. Epub 2017 Jul 18.

Department of Genetics and Genomic Sciences and Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, USA; Graduate School of Biomedical Sciences, Icahn School of Medicine at Mount Sinai, New York, USA. Electronic address:

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http://dx.doi.org/10.1016/j.envpol.2017.07.023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5595640PMC
November 2017

Modulation of Peptide Based Nano-Assemblies with Electric and Magnetic Fields.

Sci Rep 2017 06 2;7(1):2726. Epub 2017 Jun 2.

Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, 781039, India.

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http://dx.doi.org/10.1038/s41598-017-02609-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457452PMC
June 2017

Fabrication routes for one-dimensional nanostructures via block copolymers.

Nano Converg 2017 10;4(1):12. Epub 2017 May 10.

Institute of Research & Development, Gujarat Forensic Sciences University, Sector 18-A, Near Police Bhavan, Gandhinagar, Gujarat 382007 India.

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http://dx.doi.org/10.1186/s40580-017-0106-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423919PMC
May 2017

High pressure rheology of gas hydrate formed from multiphase systems using modified Couette rheometer.

Rev Sci Instrum 2017 Feb;88(2):025102

Petroleum Engineering Program, Department of Ocean Engineering, Indian Institute of Technology Madras, Chennai 600036, India.

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http://dx.doi.org/10.1063/1.4974750DOI Listing
February 2017

Multifarious applications of atomic force microscopy in forensic science investigations.

Forensic Sci Int 2017 Apr 11;273:53-63. Epub 2017 Feb 11.

Gujarat Forensic Sciences University, Sector 18A, Near Police Bhawan, Gandhinagar, India.

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http://dx.doi.org/10.1016/j.forsciint.2017.01.030DOI Listing
April 2017

Analysis of Transcriptional Variability in a Large Human iPSC Library Reveals Genetic and Non-genetic Determinants of Heterogeneity.

Cell Stem Cell 2017 04 22;20(4):518-532.e9. Epub 2016 Dec 22.

Department of Developmental and Regenerative Biology, Black Family Stem Cell Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA; Department of Pharmacology and Systems Therapeutics, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.

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http://dx.doi.org/10.1016/j.stem.2016.11.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5384872PMC
April 2017

An Unusual Complication of Pyogenic Liver Abscess.

J Clin Exp Hepatol 2016 Dec 19;6(4):337-338. Epub 2016 Jul 19.

Department of Gastroenterology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India.

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http://dx.doi.org/10.1016/j.jceh.2016.07.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5157914PMC
December 2016

LEARNING PARSIMONIOUS ENSEMBLES FOR UNBALANCED COMPUTATIONAL GENOMICS PROBLEMS.

Pac Symp Biocomput 2017 ;22:288-299

Icahn Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5147733PMC
http://dx.doi.org/10.1142/9789813207813_0028DOI Listing
June 2017

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Nat Commun 2016 10 10;7:13205. Epub 2016 Oct 10.

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http://dx.doi.org/10.1038/ncomms13205DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5062501PMC
October 2016

Involvement of the NLRC4-Inflammasome in Diabetic Nephropathy.

PLoS One 2016 5;11(10):e0164135. Epub 2016 Oct 5.

Department of Pathology, University of Iowa Carver College of Medicine, Iowa City, IA, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0164135PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5051905PMC
June 2017

NMR-based urinary profiling of lactulose/mannitol ratio used to assess the altered intestinal permeability in acute on chronic liver failure (ACLF) patients.

Magn Reson Chem 2017 Apr 29;55(4):289-296. Epub 2016 Sep 29.

Department of Gastroenterology, Sanjay Gandhi Post Graduate Institute of Medical Science, Lucknow, India.

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http://doi.wiley.com/10.1002/mrc.4525
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http://dx.doi.org/10.1002/mrc.4525DOI Listing
April 2017

Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis.

Nat Commun 2016 08 23;7:12460. Epub 2016 Aug 23.

Sage Bionetworks, Seattle, Washington 98115, USA.

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http://dx.doi.org/10.1038/ncomms12460DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4996969PMC
August 2016

Reduced Insulin Receptor Expression Enhances Proximal Tubule Gluconeogenesis.

J Cell Biochem 2017 02 27;118(2):276-285. Epub 2016 Jun 27.

Department of Molecular Medicine and Biotechnology, SGPGIMS, Lucknow, 226014, India.

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http://dx.doi.org/10.1002/jcb.25632DOI Listing
February 2017

Breast Imaging in the Era of Big Data: Structured Reporting and Data Mining.

AJR Am J Roentgenol 2016 Feb 20;206(2):259-64. Epub 2015 Nov 20.

4 Department of Radiology, Clinical Informatics, Radiology IT, Mount Sinai Health System, Icahn School of Medicine at Mount Sinai, New York, NY.

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http://research.mssm.edu/gpandey/docs/ajr_15_15396.pdf
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http://dx.doi.org/10.2214/AJR.15.15396DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4876713PMC
February 2016

Prediction of Genetic Interactions Using Machine Learning and Network Properties.

Front Bioeng Biotechnol 2015 26;3:172. Epub 2015 Oct 26.

Department of Genetics and Genomic Sciences and Graduate School of Biomedical Sciences, Icahn Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai , New York, NY , USA.

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http://dx.doi.org/10.3389/fbioe.2015.00172DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4620407PMC
November 2015

Predicting protein function and other biomedical characteristics with heterogeneous ensembles.

Methods 2016 Jan 2;93:92-102. Epub 2015 Sep 2.

Icahn Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Graduate School of Biomedical Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ymeth.2015.08.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4718788PMC
January 2016

Long noncoding RNAs and neuroblastoma.

Oncotarget 2015 Jul;6(21):18265-75

Department of Medical Genetics, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4621889PMC
http://dx.doi.org/10.18632/oncotarget.4251DOI Listing
July 2015

Fighting Neuroblastomas with NBAT1.

Oncoscience 2015 18;2(2):79-80. Epub 2015 Feb 18.

Department of Medical Genetics, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381699PMC
http://dx.doi.org/10.18632/oncoscience.126DOI Listing
April 2015

Treatment algorithms for managing hepatocellular carcinoma.

J Clin Exp Hepatol 2014 Aug 6;4(Suppl 3):S80-9. Epub 2014 Jun 6.

Department of Gastroenterology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow, Uttar Pradesh, India.

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http://dx.doi.org/10.1016/j.jceh.2014.05.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4284287PMC
August 2014

Insulin regulates nitric oxide production in the kidney collecting duct cells.

J Biol Chem 2015 Feb 22;290(9):5582-91. Epub 2014 Dec 22.

From the Department of Molecular Medicine and Biotechnology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow 226014, India and

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http://dx.doi.org/10.1074/jbc.M114.592741DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4342472PMC
February 2015

Temporal separation of replication and transcription during S-phase progression.

Cell Cycle 2014 ;13(20):3241-8

a Department of Medical Genetics; Institute of Biomedicine; The Sahlgrenska Academy ; University of Gothenburg ; Gothenburg , Sweden.

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http://dx.doi.org/10.4161/15384101.2014.953876DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615114PMC
September 2015

Enhancing the functional content of eukaryotic protein interaction networks.

PLoS One 2014 2;9(10):e109130. Epub 2014 Oct 2.

Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, United States of America; Gladstone Institutes, University of California San Francisco, San Francisco, CA, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0109130PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4183583PMC
December 2015

Guest Editorial for Special Section on BIOKDD2013.

IEEE/ACM Trans Comput Biol Bioinform 2014 Sep-Oct;11(5):773-4

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http://dx.doi.org/10.1109/tcbb.2014.2348731DOI Listing
March 2016

Deletion of the insulin receptor in the proximal tubule promotes hyperglycemia.

J Am Soc Nephrol 2013 Jul 30;24(8):1209-14. Epub 2013 May 30.

Department of Molecular Medicine & Biotechnology, Sanjay Gandhi Postgraduate Institute of Medical Sciences, Lucknow, India.

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http://dx.doi.org/10.1681/ASN.2012060628DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3736710PMC
July 2013

Predicting submicron air pollution indicators: a machine learning approach.

Environ Sci Process Impacts 2013 May;15(5):996-1005

Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, NY 10029, USA.

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http://dx.doi.org/10.1039/c3em30890aDOI Listing
May 2013

A large-scale evaluation of computational protein function prediction.

Authors:
Predrag Radivojac Wyatt T Clark Tal Ronnen Oron Alexandra M Schnoes Tobias Wittkop Artem Sokolov Kiley Graim Christopher Funk Karin Verspoor Asa Ben-Hur Gaurav Pandey Jeffrey M Yunes Ameet S Talwalkar Susanna Repo Michael L Souza Damiano Piovesan Rita Casadio Zheng Wang Jianlin Cheng Hai Fang Julian Gough Patrik Koskinen Petri Törönen Jussi Nokso-Koivisto Liisa Holm Domenico Cozzetto Daniel W A Buchan Kevin Bryson David T Jones Bhakti Limaye Harshal Inamdar Avik Datta Sunitha K Manjari Rajendra Joshi Meghana Chitale Daisuke Kihara Andreas M Lisewski Serkan Erdin Eric Venner Olivier Lichtarge Robert Rentzsch Haixuan Yang Alfonso E Romero Prajwal Bhat Alberto Paccanaro Tobias Hamp Rebecca Kaßner Stefan Seemayer Esmeralda Vicedo Christian Schaefer Dominik Achten Florian Auer Ariane Boehm Tatjana Braun Maximilian Hecht Mark Heron Peter Hönigschmid Thomas A Hopf Stefanie Kaufmann Michael Kiening Denis Krompass Cedric Landerer Yannick Mahlich Manfred Roos Jari Björne Tapio Salakoski Andrew Wong Hagit Shatkay Fanny Gatzmann Ingolf Sommer Mark N Wass Michael J E Sternberg Nives Škunca Fran Supek Matko Bošnjak Panče Panov Sašo Džeroski Tomislav Šmuc Yiannis A I Kourmpetis Aalt D J van Dijk Cajo J F ter Braak Yuanpeng Zhou Qingtian Gong Xinran Dong Weidong Tian Marco Falda Paolo Fontana Enrico Lavezzo Barbara Di Camillo Stefano Toppo Liang Lan Nemanja Djuric Yuhong Guo Slobodan Vucetic Amos Bairoch Michal Linial Patricia C Babbitt Steven E Brenner Christine Orengo Burkhard Rost Sean D Mooney Iddo Friedberg

Nat Methods 2013 Mar 27;10(3):221-7. Epub 2013 Jan 27.

School of Informatics and Computing, Indiana University, Bloomington, Indiana, USA.

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http://dx.doi.org/10.1038/nmeth.2340DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3584181PMC
March 2013

Decoding dendritic cell function through module and network analysis.

J Immunol Methods 2013 Jan 23;387(1-2):71-80. Epub 2012 Oct 23.

Institute for Genomics and Multiscale Biology and Department of Genetics and Genomic Sciences, Mount Sinai School of Medicine, New York, NY 10029, USA.

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http://dx.doi.org/10.1016/j.jim.2012.09.012DOI Listing
January 2013

Long noncoding RNA-mediated maintenance of DNA methylation and transcriptional gene silencing.

Development 2012 Aug 21;139(15):2792-803. Epub 2012 Jun 21.

Science for Life Laboratory, Department of Immunology, Genetics and Pathology, Dag Hammarskjölds Väg 20, Uppsala University, Uppsala, Sweden.

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http://dev.biologists.org/content/develop/139/15/2792.full.p
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http://dev.biologists.org/cgi/doi/10.1242/dev.079566
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http://dx.doi.org/10.1242/dev.079566DOI Listing
August 2012

Free Energy Profiles along Consensus Normal Modes Provide Insight into HIV-1 Protease Flap Opening.

J Chem Theory Comput 2011 Aug 7;7(8):2348-52. Epub 2011 Jul 7.

CNRS Institut de Biochimie et Biophysique Moléculaire et Cellulaire, Université Paris Sud 11 , 91405 Orsay, France.

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http://dx.doi.org/10.1021/ct200237uDOI Listing
August 2011

An integrative multi-network and multi-classifier approach to predict genetic interactions.

PLoS Comput Biol 2010 Sep 9;6(9). Epub 2010 Sep 9.

Department of Computer Science and Engineering, University of Minnesota, Twin Cities, Minneapolis, Minnesota, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1000928DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936518PMC
September 2010

Kcnq1ot1 noncoding RNA mediates transcriptional gene silencing by interacting with Dnmt1.

Development 2010 Aug 23;137(15):2493-9. Epub 2010 Jun 23.

Department of Genetics and Pathology, Dag Hammarskjölds Väg 20, 75185 Rudbeck Laboratory, Uppsala University, Uppsala 75185, Sweden.

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http://dev.biologists.org/content/develop/137/15/2493.full.p
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http://dev.biologists.org/cgi/doi/10.1242/dev.048181
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http://dx.doi.org/10.1242/dev.048181DOI Listing
August 2010

Characterization of the RNA content of chromatin.

Genome Res 2010 Jul 19;20(7):899-907. Epub 2010 Apr 19.

Department of Genetics and Pathology, Uppsala University, Uppsala S-75185, Sweden.

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http://dx.doi.org/10.1101/gr.103473.109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2892091PMC
July 2010

Subspace differential coexpression analysis: problem definition and a general approach.

Pac Symp Biocomput 2010 :145-56

Department of Computer Science, University of Minnesota, Twin Cities, 200 Union Street SE, Minneapolis, MN 55455, USA.

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November 2013

Kinetic studies of recombinant human interferon-gamma expression in continuous cultures of E. coli.

J Ind Microbiol Biotechnol 2009 Dec 30;36(12):1453-8. Epub 2009 Aug 30.

School of Biotechnology, Jawaharlal Nehru University, New Delhi, India.

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http://dx.doi.org/10.1007/s10295-009-0632-xDOI Listing
December 2009

Incorporating functional inter-relationships into protein function prediction algorithms.

BMC Bioinformatics 2009 May 12;10:142. Epub 2009 May 12.

Department of Computer Science & Engineering, University of Minnesota, Minneapolis, MN, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2693438PMC
May 2009

Clinicopathological spectrum of non-alcoholic fatty liver disease among patients in Kerala.

Indian J Clin Biochem 2009 Apr 9;24(2):155-8. Epub 2009 Jul 9.

Department of Biochemistry, Amrita Institute of Medical Sciences, Elamakkara P.O. Cochin, 682 026 Kerala India ; Department of Biochemistry, Agartala Govt. Medical College P.O. Kunjaban, Agartala, 799006 West Tripura India.

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http://dx.doi.org/10.1007/s12291-009-0028-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3453229PMC
April 2009

Regulation of the mammalian epigenome by long noncoding RNAs.

Biochim Biophys Acta 2009 Sep 30;1790(9):936-47. Epub 2008 Oct 30.

Institut Curie/CNRS UMR, Paris, France.

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http://dx.doi.org/10.1016/j.bbagen.2008.10.007DOI Listing
September 2009

The structure and function of a cis-acting element located upstream of the IRES that influences Coxsackievirus B3 RNA translation.

Virology 2008 Aug 3;377(2):345-54. Epub 2008 Jun 3.

Department of Microbiology and Cell Biology, Indian Institute of Science, Bangalore-560012, India.

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http://dx.doi.org/10.1016/j.virol.2008.04.019DOI Listing
August 2008

Production and purification of recombinant human granulocyte-macrophage colony stimulating factor (GM-CSF) from high cell density cultures of Pichia pastoris.

Bioprocess Biosyst Eng 2007 Sep 24;30(5):305-12. Epub 2007 Apr 24.

Centre for Biotechnology, Jawaharlal Nehru University, New Delhi, 110067, India.

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http://dx.doi.org/10.1007/s00449-007-0124-1DOI Listing
September 2007

Extracting the hidden features in saline osmotic tolerance in Saccharomyces cerevisiae from DNA microarray data using the self-organizing map: biosynthesis of amino acids.

Appl Microbiol Biotechnol 2007 May 30;75(2):415-26. Epub 2007 Jan 30.

Department of Biotechnology, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.

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May 2007

Combined effect of protein fusion and signal sequence greatly enhances the production of recombinant human GM-CSF in Escherichia coli.

Mol Biotechnol 2005 Jun;30(2):103-16

Center for Biotechnology, Jawaharlal Nehru University, New Dehli, Delhi, 110067, India.

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http://dx.doi.org/10.1385/MB:30:2:103DOI Listing
June 2005

Overexpression and purification of recombinant human interferon alpha2b in Escherichia coli.

Protein Expr Purif 2005 Jun;41(2):313-22

Centre for Biotechnology, Jawaharlal Nehru University, New Delhi-110067, India.

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http://dx.doi.org/10.1016/j.pep.2004.12.018DOI Listing
June 2005