Frederik Lermyte

Frederik Lermyte

UNVERIFIED PROFILE

Are you Frederik Lermyte?   Register this Author

Register author
Frederik Lermyte

Frederik Lermyte

Publications by authors named "Frederik Lermyte"

Are you Frederik Lermyte?   Register this Author

22Publications

161Reads

22Profile Views

MIND: A Double-Linear Model To Accurately Determine Monoisotopic Precursor Mass in High-Resolution Top-Down Proteomics.

Anal Chem 2019 Aug 23;91(15):10310-10319. Epub 2019 Jul 23.

UA-VITO Center for Proteomics , University of Antwerp , 2000 Antwerp , Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.analchem.9b02682DOI Listing
August 2019

Generation of maghemite nanocrystals from iron-sulfur centres.

Dalton Trans 2019 Jul;48(26):9564-9569

Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.

View Article

Download full-text PDF

Source
http://xlink.rsc.org/?DOI=C9DT00514E
Publisher Site
http://dx.doi.org/10.1039/c9dt00514eDOI Listing
July 2019

Top or Middle? Up or Down? Toward a Standard Lexicon for Protein Top-Down and Allied Mass Spectrometry Approaches.

J Am Soc Mass Spectrom 2019 Jul 9;30(7):1149-1157. Epub 2019 May 9.

Department of Chemistry and Biochemistry, Department of Biological Chemistry, David Geffen School of Medicine, and UCLA/DOE Institute of Genomics and Proteomics, University of California, Los Angeles, CA, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13361-019-02201-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6591204PMC
July 2019

masstodon: A Tool for Assigning Peaks and Modeling Electron Transfer Reactions in Top-Down Mass Spectrometry.

Anal Chem 2019 Feb 28;91(3):1801-1807. Epub 2019 Jan 28.

Department of Mathematics, Informatics, and Mechanics , University of Warsaw , Warsaw 02-097 , Poland.

View Article

Download full-text PDF

Source
http://pubs.acs.org/doi/10.1021/acs.analchem.8b01479
Publisher Site
http://dx.doi.org/10.1021/acs.analchem.8b01479DOI Listing
February 2019

Does deamidation of islet amyloid polypeptide accelerate amyloid fibril formation?

Chem Commun (Camb) 2018 Dec;54(98):13853-13856

Department of Chemistry, University of Warwick, Coventry, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/c8cc06675bDOI Listing
December 2018

Radical solutions: Principles and application of electron-based dissociation in mass spectrometry-based analysis of protein structure.

Mass Spectrom Rev 2018 11 9;37(6):750-771. Epub 2018 Feb 9.

Biomolecular and Analytical Mass Spectrometry Group, Department of Chemistry, University of Antwerp, Antwerp, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/mas.21560DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6131092PMC
November 2018

Estimation of Rates of Reactions Triggered by Electron Transfer in Top-Down Mass Spectrometry.

J Comput Biol 2018 03 25;25(3):282-301. Epub 2017 Sep 25.

1 Faculty of Mathematics, Informatics, and Mechanics, University of Warsaw , Warsaw, Poland .

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1089/cmb.2017.0156DOI Listing
March 2018

Fixed-Charge Trimethyl Pyrilium Modification for Enabling Enhanced Top-Down Mass Spectrometry Sequencing of Intact Protein Complexes.

Anal Chem 2018 02 2;90(4):2756-2764. Epub 2018 Feb 2.

Department of Chemistry, University of Michigan , 930 North University Avenue, Ann Arbor, Michigan 48109, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.analchem.7b04806DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6340295PMC
February 2018

InSourcerer: a high-throughput method to search for unknown metabolite modifications by mass spectrometry.

Rapid Commun Mass Spectrom 2017 Sep;31(17):1396-1404

Department of Mathematics and Computer Science, University of Antwerp, Antwerpen, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/rcm.7910DOI Listing
September 2017

A broader view on ion heating in traveling-wave devices using fragmentation of CsI clusters and extent of H˙ migration as molecular thermometers.

Analyst 2017 Sep;142(18):3388-3399

Biomolecular & Analytical Mass Spectrometry Group, Department of Chemistry, University of Antwerp, Antwerp, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/c7an00161dDOI Listing
September 2017

Top-down/Bottom-up Mass Spectrometry Workflow Using Dissolvable Polyacrylamide Gels.

Anal Chem 2017 08 2;89(16):8244-8250. Epub 2017 Aug 2.

Department of Chemistry and Biochemistry, University of California-Los Angeles , Los Angeles, California 90095, United States.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.analchem.7b00357DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5590889PMC
August 2017

Specific sequences in the N-terminal domain of human small heat-shock protein HSPB6 dictate preferential hetero-oligomerization with the orthologue HSPB1.

J Biol Chem 2017 06 9;292(24):9944-9957. Epub 2017 May 9.

From the Laboratory for Biocrystallography, Department of Pharmaceutical and Pharmacological Sciences, KU Leuven, 3000 Leuven, Belgium,

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M116.773515DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5473246PMC
June 2017

Conformational Space and Stability of ETD Charge Reduction Products of Ubiquitin.

J Am Soc Mass Spectrom 2017 01 5;28(1):69-76. Epub 2016 Aug 5.

Biomolecular and Analytical Mass Spectrometry Group, Department of Chemistry, University of Antwerp, Antwerpen, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13361-016-1444-7DOI Listing
January 2017

The preferential heterodimerization of human small heat shock proteins HSPB1 and HSPB6 is dictated by the N-terminal domain.

Arch Biochem Biophys 2016 Nov 4;610:41-50. Epub 2016 Oct 4.

Laboratory for Biocrystallography, Dept. of Pharmaceutical and Pharmacological Sciences, KU Leuven, Belgium. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.abb.2016.10.002DOI Listing
November 2016

Gas-phase microsolvation of ubiquitin: investigation of crown ether complexation sites using ion mobility-mass spectrometry.

Analyst 2016 Oct 5;141(19):5502-10. Epub 2016 Aug 5.

Department of Biology, Chemistry, Pharmacy, Freie Universität Berlin, 14195 Berlin, Germany.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1039/c6an01377eDOI Listing
October 2016

Characterization of top-down ETD in a travelling-wave ion guide.

Methods 2015 Nov 23;89:22-9. Epub 2015 May 23.

Biomolecular & Analytical Mass Spectrometry Group, Department of Chemistry, University of Antwerp, Antwerpen, Belgium; UA-VITO Center for Proteomics, University of Antwerp, Antwerpen, Belgium. Electronic address:

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S10462023150021
Publisher Site
http://dx.doi.org/10.1016/j.ymeth.2015.05.019DOI Listing
November 2015

Differences in the Elemental Isotope Definition May Lead to Errors in Modern Mass-Spectrometry-Based Proteomics.

Anal Chem 2015 Nov 22;87(21):10747-54. Epub 2015 Oct 22.

Interuniversity Institute of Biostatistics and statistical Bioinformatics, Hasselt University , 3590 Diepenbeek, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1021/acs.analchem.5b01165DOI Listing
November 2015

Electron transfer dissociation provides higher-order structural information of native and partially unfolded protein complexes.

Proteomics 2015 Aug 22;15(16):2813-22. Epub 2015 Jul 22.

UA-VITO Center for Proteomics, University of Antwerp, Antwerp, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/pmic.201400516DOI Listing
August 2015

Extensive Charge Reduction and Dissociation of Intact Protein Complexes Following Electron Transfer on a Quadrupole-Ion Mobility-Time-of-Flight MS.

J Am Soc Mass Spectrom 2015 Jul 11;26(7):1068-76. Epub 2015 Apr 11.

Biomolecular and Analytical Mass Spectrometry group, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, 2020, Antwerp, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13361-015-1124-zDOI Listing
July 2015

ETD allows for native surface mapping of a 150 kDa noncovalent complex on a commercial Q-TWIMS-TOF instrument.

J Am Soc Mass Spectrom 2014 Mar 10;25(3):343-50. Epub 2014 Jan 10.

Biomolecular and Analytical Mass Spectrometry group, Department of Chemistry, University of Antwerp, Groenenborgerlaan 171, 2020, Antwerpen, Belgium.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1007/s13361-013-0798-3DOI Listing
March 2014