Frederick R Blattner

Frederick R Blattner

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Frederick R Blattner

Frederick R Blattner

Publications by authors named "Frederick R Blattner"

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Enhancing the Translational Capacity of E. coli by Resolving the Codon Bias.

ACS Synth Biol 2018 11 2;7(11):2656-2664. Epub 2018 Nov 2.

Scarab Genomics LLC, Madison , Wisconsin 53713 , United States.

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http://pubs.acs.org/doi/10.1021/acssynbio.8b00332
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http://dx.doi.org/10.1021/acssynbio.8b00332DOI Listing
November 2018

Periplasmic delivery of biologically active human interleukin-10 in Escherichia coli via a sec-dependent signal peptide.

J Mol Microbiol Biotechnol 2012 21;22(1):1-9. Epub 2012 Feb 21.

Institute of Medical Microbiology and Hygiene, Dresden University of Technology, Dresden, Germany.

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https://www.karger.com/Article/FullText/336043
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http://dx.doi.org/10.1159/000336043DOI Listing
August 2012

Bacteriophage recombineering in the lytic state using the lambda red recombinases.

Microb Biotechnol 2012 Jul 13;5(4):466-76. Epub 2011 Sep 13.

Institute of Biochemistry, Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary.

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http://dx.doi.org/10.1111/j.1751-7915.2011.00292.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3815324PMC
July 2012

Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs.

Microb Cell Fact 2012 Jan 20;11:11. Epub 2012 Jan 20.

Institute of Biochemistry, Biological Research Center of the Hungarian Academy of Sciences, 62 Temesvári krt, H6726 Szeged, Hungary.

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http://dx.doi.org/10.1186/1475-2859-11-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3280934PMC
January 2012

Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications.

Microb Cell Fact 2010 May 21;9:38. Epub 2010 May 21.

Institute of Biochemistry, Biological Research Center of the Hungarian Academy of Sciences, 62 Temesvari krt, H6726 Szeged, Hungary.

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http://dx.doi.org/10.1186/1475-2859-9-38DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2891674PMC
May 2010

Metabolic engineering of a reduced-genome strain of Escherichia coli for L-threonine production.

Microb Cell Fact 2009 Jan 7;8. Epub 2009 Jan 7.

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Korea.

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http://dx.doi.org/10.1186/1475-2859-8-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2634754PMC
January 2009

Transcription profiling of the stringent response in Escherichia coli.

J Bacteriol 2008 Feb 26;190(3):1084-96. Epub 2007 Nov 26.

Department of Genetics, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.01092-07
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http://dx.doi.org/10.1128/JB.01092-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2223561PMC
February 2008

Expression of two recombinant chloramphenicol acetyltransferase variants in highly reduced genome Escherichia coli strains.

Biotechnol Bioeng 2007 Dec;98(5):1056-70

Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, South Carolina 29634, USA.

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http://dx.doi.org/10.1002/bit.21491DOI Listing
December 2007

Escherichia coli K1-specific bacteriophage CUS-3 distribution and function in phase-variable capsular polysialic acid O acetylation.

J Bacteriol 2007 Sep 29;189(17):6447-56. Epub 2007 Jun 29.

Laboratory of Sialobiology and Comparative Metabolomics, Department of Pathobiology, University of Illinois at Urbana-Champain, Urbana, IL 61802, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.00657-07
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http://dx.doi.org/10.1128/JB.00657-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1951898PMC
September 2007

Recombinant protein production in an Escherichia coli reduced genome strain.

Metab Eng 2007 Mar 21;9(2):133-41. Epub 2006 Oct 21.

Department of Chemical and Biomolecular Engineering, Clemson University, Clemson, SC 29634, USA.

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http://dx.doi.org/10.1016/j.ymben.2006.10.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3710453PMC
March 2007

Nucleotide sequence analysis of the enteropathogenic Escherichia coli adherence factor plasmid pMAR7.

Infect Immun 2006 Sep;74(9):5408-13

Department of Microbiology and Immunology, Center for Vaccine Development, University of Maryland School of Medicine, 685 West Baltimore St., Baltimore, MD 21201, USA.

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http://dx.doi.org/10.1128/IAI.01840-05DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1594828PMC
September 2006

Identification and characterization of Escherichia coli RS218-derived islands in the pathogenesis of E. coli meningitis.

J Infect Dis 2006 Aug 30;194(3):358-64. Epub 2006 Jun 30.

Division of Pediatric Infectious Diseases, Johns Hopkins University School of Medicine, Baltimore, MD 21287, USA.

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http://dx.doi.org/10.1086/505429DOI Listing
August 2006

Emergent properties of reduced-genome Escherichia coli.

Science 2006 May 27;312(5776):1044-6. Epub 2006 Apr 27.

Institute of Biochemistry, Biological Research Center, H-6726 Szeged, Hungary.

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http://dx.doi.org/10.1126/science.1126439DOI Listing
May 2006

IscR-dependent gene expression links iron-sulphur cluster assembly to the control of O2-regulated genes in Escherichia coli.

Mol Microbiol 2006 May;60(4):1058-75

Microbiology Doctoral Training Program, Department of Biomolecular Chemistry, University of Winsconsin, Madison, WI 53706, USA.

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http://dx.doi.org/10.1111/j.1365-2958.2006.05160.xDOI Listing
May 2006

In silico design and adaptive evolution of Escherichia coli for production of lactic acid.

Biotechnol Bioeng 2005 Sep;91(5):643-8

Department of Bioengineering, University of California, San Diego, 9500 Gilman Drive, La Jolla, California 92093-0412, USA.

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http://dx.doi.org/10.1002/bit.20542DOI Listing
September 2005

SspA is required for acid resistance in stationary phase by downregulation of H-NS in Escherichia coli.

Mol Microbiol 2005 May;56(3):719-34

Transcription Control Section, Gene Regulation and Chromosome Biology Laboratory, Center for Cancer Research, National Cancer Institute at Frederick, NIH, Bldg. 469, PO Box B, Frederick, MD 21702, USA.

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http://doi.wiley.com/10.1111/j.1365-2958.2005.04567.x
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http://dx.doi.org/10.1111/j.1365-2958.2005.04567.xDOI Listing
May 2005

Global transcriptional programs reveal a carbon source foraging strategy by Escherichia coli.

J Biol Chem 2005 Apr 10;280(16):15921-7. Epub 2005 Feb 10.

Department of Genetics, University of Wisconsin, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1074/jbc.M414050200DOI Listing
April 2005

Genome of bacteriophage P1.

J Bacteriol 2004 Nov;186(21):7032-68

Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics of the Polish Academy of Sciences, Ul. Pawinskiego 5A, 02-106 Warsaw, Poland.

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http://dx.doi.org/10.1128/JB.186.21.7032-7068.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC523184PMC
November 2004

Global transcriptional effects of a suppressor tRNA and the inactivation of the regulator frmR.

J Bacteriol 2004 Oct;186(20):6714-20

Laboratory of Genetics, University of Wisconsin-Madison, 445 Henry Mall, Madison, WI 53706, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.186.20.6714-6720.2004
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http://dx.doi.org/10.1128/JB.186.20.6714-6720.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC522192PMC
October 2004

Systematic mutagenesis of the Escherichia coli genome.

J Bacteriol 2004 Aug;186(15):4921-30

Department of Genetics, University of Madison-Wisconsin, Rm. 206, 445 Henry Mall, Madison, WI 53706, USA.

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http://dx.doi.org/10.1128/JB.186.15.4921-4930.2004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC451658PMC
August 2004

Mauve: multiple alignment of conserved genomic sequence with rearrangements.

Genome Res 2004 Jul;14(7):1394-403

Department of Computer Science, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.

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http://www.genome.org/cgi/doi/10.1101/gr.2289704
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http://dx.doi.org/10.1101/gr.2289704DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC442156PMC
July 2004

Conditional lethal amber mutations in essential Escherichia coli genes.

J Bacteriol 2004 May;186(9):2673-81

Laboratory of Genetics, University of Wisconsin-Madison, 445 Henry Mall, Madison, WI 53706, USA.

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http://jb.asm.org/content/186/9/2673.full.pdf
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC387789PMC
http://dx.doi.org/10.1128/jb.186.9.2673-2681.2004DOI Listing
May 2004

GRIL: genome rearrangement and inversion locator.

Bioinformatics 2004 Jan;20(1):122-4

Department of Computer Science, University of Wisconsin-Madison, 1656 Linden Dr, Madison, WI 53706, USA.

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http://dx.doi.org/10.1093/bioinformatics/btg378DOI Listing
January 2004

The export of coat protein from enteroaggregative Escherichia coli by a specific ATP-binding cassette transporter system.

J Biol Chem 2003 Nov 21;278(46):45680-9. Epub 2003 Aug 21.

Center for Vaccine Development, Departments of Pediatrics, Medicine, and Microbiology & Immunology, University of Maryland School of Medicine, Baltimore, Maryland 21201, USA.

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http://dx.doi.org/10.1074/jbc.M306413200DOI Listing
November 2003

Uropathogenic Escherichia coli use d-serine deaminase to modulate infection of the murine urinary tract.

Mol Microbiol 2003 Jul;49(1):55-67

Department of Medical Microbiology and Immunology, University of Wisconsin School of Medicine, 1300 University Avenue, Madison, Wisconsin 53706, USA.

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http://dx.doi.org/10.1046/j.1365-2958.2003.03543.xDOI Listing
July 2003

Gene replacement without selection: regulated suppression of amber mutations in Escherichia coli.

Gene 2003 Jun;311:153-63

Laboratory of Genetics, University of Wisconsin-Madison, 445 Henry Mall, Madison, WI 53706, USA.

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http://dx.doi.org/10.1016/s0378-1119(03)00585-7DOI Listing
June 2003

ASAP, a systematic annotation package for community analysis of genomes.

Nucleic Acids Res 2003 Jan;31(1):147-51

Animal Health and Biomedical Sciences, University of Wisconsin-Madison, 656 Linden Dr Madison, WI 53706-1581, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165572PMC
http://dx.doi.org/10.1093/nar/gkg125DOI Listing
January 2003

Strains of Escherichia coli O157:H7 differ primarily by insertions or deletions, not single-nucleotide polymorphisms.

J Bacteriol 2002 Apr;184(7):1873-9

Division of Infectious Diseases, Department of Molecular Biology, Massachusetts General Hospital, Boston, Massachusetts 02114, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC134921PMC
http://dx.doi.org/10.1128/jb.184.7.1873-1879.2002DOI Listing
April 2002

Engineering a reduced Escherichia coli genome.

Genome Res 2002 Apr;12(4):640-7

Institute of Biochemistry, Biological Research Center, H-6701 Szeged, Hungary.

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http://dx.doi.org/10.1101/gr.217202DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC187512PMC
April 2002