Publications by authors named "Franklin Huang"

43Publications

Monitoring Prostate Cancer Incidence Trends: Value of Multiple Imputation and Delay Adjustment to Discern Disparities in Stage-specific Trends.

Eur Urol 2020 Nov 2. Epub 2020 Nov 2.

Department of Epidemiology and Biostatistics, UCSF, San Francisco, CA, USA; Helen Diller Family Comprehensive Cancer Center, UCSF, San Francisco, CA, USA; Department of Urology, UCSF, San Francisco, CA, USA; San Francisco Veterans Affairs Medical Center, San Francisco, CA, USA.

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http://dx.doi.org/10.1016/j.eururo.2020.10.022DOI Listing
November 2020

Genomic Profiling of Prostate Cancers from Men with African and European Ancestry.

Clin Cancer Res 2020 Sep 10;26(17):4651-4660. Epub 2020 Jul 10.

Division of Hematology/Oncology, Department of Medicine; Helen Diller Family Comprehensive Cancer Center; Bakar Computational Health Sciences Institute; Institute for Human Genetics; San Francisco Veterans Affairs Medical Center; University of California, San Francisco, San Francisco, California.

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http://dx.doi.org/10.1158/1078-0432.CCR-19-4112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7597977PMC
September 2020

Expression of the SARS-CoV-2 receptor, and in prostate epithelial cells.

bioRxiv 2020 Apr 25. Epub 2020 Apr 25.

Division of Hematology/Oncology, Department of Medicine; Helen Diller Family Comprehensive Cancer Center; Bakar Computational Health Sciences Institute; Institute for Human Genetics; University of California, San Francisco, San Francisco, CA.

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http://dx.doi.org/10.1101/2020.04.24.056259DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7263499PMC
April 2020

Expression of ACE2, the SARS-CoV-2 Receptor, and TMPRSS2 in Prostate Epithelial Cells.

Eur Urol 2020 Aug 6;78(2):296-298. Epub 2020 May 6.

Division of Hematology/Oncology, Department of Medicine, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA; Bakar Computational Health Sciences Institute, University of California, San Francisco, San Francisco, CA, USA; Institute for Human Genetics, University of California, San Francisco, San Francisco, CA, USA; San Francisco Veterans Affairs Health Care System, San Francisco, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.eururo.2020.04.065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7200365PMC
August 2020

De novo somatic mutations and KRAS amplification are associated with cholangiocarcinoma in a patient with a history of choledochal cyst.

J Pediatr Surg 2020 Mar 24. Epub 2020 Mar 24.

Department of Surgery, University of CA, San Francisco, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jpedsurg.2020.03.008DOI Listing
March 2020

Mesenchymal and MAPK Expression Signatures Associate with Telomerase Promoter Mutations in Multiple Cancers.

Mol Cancer Res 2020 07 10;18(7):1050-1062. Epub 2020 Apr 10.

Division of Hematology/Oncology, Department of Medicine, Helen Diller Family Cancer Center; Bakar Computational Health Sciences Institute, Institute of Human Genetics, University of California San Francisco, San Francisco, California.

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http://dx.doi.org/10.1158/1541-7786.MCR-19-1244DOI Listing
July 2020

Racial Disparities in Low-Risk Prostate Cancer-Reply.

JAMA 2019 05;321(17):1727-1728

Division of Hematology/Oncology, University of California, San Francisco.

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http://dx.doi.org/10.1001/jama.2019.2088DOI Listing
May 2019

A Tumor-Agnostic NTRK (TRK) Inhibitor.

Cell 2019 03;177(1)

University of California, San Francisco, San Francisco, CA 94158. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2019.02.049DOI Listing
March 2019

Prostate Cancer-Specific Mortality Across Gleason Scores in Black vs Nonblack Men.

JAMA 2018 12;320(23):2479-2481

Division of Hematology/Oncology, Department of Medicine, University of California, San Francisco.

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http://dx.doi.org/10.1001/jama.2018.11716DOI Listing
December 2018

Towards Greater Inclusion in Cancer Genomics Studies.

Authors:
Franklin W Huang

Cancer Res 2018 12;78(24):6726-6727

Department of Medicine, Division of Hematology and Oncology, University of California San Francisco, San Francisco, California.

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http://dx.doi.org/10.1158/0008-5472.CAN-18-3382DOI Listing
December 2018

Allele-Specific DNA Methylation and Its Interplay with Repressive Histone Marks at Promoter-Mutant TERT Genes.

Cell Rep 2017 12;21(13):3700-3707

BioFrontiers Institute, Department of Chemistry and Biochemistry, and Howard Hughes Medical Institute, University of Colorado Boulder, Boulder, CO 80303, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2017.12.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5747321PMC
December 2017

Transparency and availability of data for cancer research.

Lancet 2016 Aug 25;388(10047):866-7. Epub 2016 Aug 25.

Harvard T H Chan School of Public Health, Harvard University, Boston, MA, USA.

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http://dx.doi.org/10.1016/S0140-6736(16)31427-1DOI Listing
August 2016

DMSO Enhances TGF-β Activity by Recruiting the Type II TGF-β Receptor From Intracellular Vesicles to the Plasma Membrane.

J Cell Biochem 2016 07 18;117(7):1568-79. Epub 2016 Feb 18.

Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, Doisy Research Center, 1100 S. Grand Boulevard, St. Louis, Missouri, 63104.

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http://dx.doi.org/10.1002/jcb.25448DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6123219PMC
July 2016

Ethanol Enhances TGF-β Activity by Recruiting TGF-β Receptors From Intracellular Vesicles/Lipid Rafts/Caveolae to Non-Lipid Raft Microdomains.

J Cell Biochem 2016 Apr 18;117(4):860-71. Epub 2015 Oct 18.

Department of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, Doisy Research Center, St. Louis, Missouri, 63104.

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http://dx.doi.org/10.1002/jcb.25389DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6123223PMC
April 2016

Launching an Interactive Cancer Projects Map: A Collaborative Approach to Global Cancer Research and Program Development.

J Glob Oncol 2015 Oct 23;1(1):7-10. Epub 2015 Sep 23.

, National Cancer Institute, Center for Global Health, Bethesda, MD; , Global Oncology, Boston, MA, and University of Hawaii, Honolulu, HI; , Global Oncology, Boston, MA, and Dana-Farber Cancer Institute, Boston, MA; , National Cancer Institute, Center for Global Health, Bethesda, MD; , Global Oncology, Boston, MA, and Broad Institute of MIT and Harvard, Cambridge, MA; , Global Oncology, Boston, MA; , Global Oncology, Boston, MA; , Global Oncology, Boston, MA; , National Cancer Institute, Center for Global Health, Bethesda, MD; , National Cancer Institute, Center for Global Heatlh, Bethesda, MD; , Global Oncology, Boston, MA; , National Cancer Institute, Center for Global Health, Bethesda, MD; , Global Oncology, Boston, MA, and Dana-Farber Cancer Institute, Boston, MA; , Global Oncology, Boston, MA, and Stanford University, Stanford, CA.

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http://dx.doi.org/10.1200/JGO.2015.000034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5551646PMC
October 2015

Comprehensive, Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas.

Authors:
Daniel J Brat Roel G W Verhaak Kenneth D Aldape W K Alfred Yung Sofie R Salama Lee A D Cooper Esther Rheinbay C Ryan Miller Mark Vitucci Olena Morozova A Gordon Robertson Houtan Noushmehr Peter W Laird Andrew D Cherniack Rehan Akbani Jason T Huse Giovanni Ciriello Laila M Poisson Jill S Barnholtz-Sloan Mitchel S Berger Cameron Brennan Rivka R Colen Howard Colman Adam E Flanders Caterina Giannini Mia Grifford Antonio Iavarone Rajan Jain Isaac Joseph Jaegil Kim Katayoon Kasaian Tom Mikkelsen Bradley A Murray Brian Patrick O'Neill Lior Pachter Donald W Parsons Carrie Sougnez Erik P Sulman Scott R Vandenberg Erwin G Van Meir Andreas von Deimling Hailei Zhang Daniel Crain Kevin Lau David Mallery Scott Morris Joseph Paulauskis Robert Penny Troy Shelton Mark Sherman Peggy Yena Aaron Black Jay Bowen Katie Dicostanzo Julie Gastier-Foster Kristen M Leraas Tara M Lichtenberg Christopher R Pierson Nilsa C Ramirez Cynthia Taylor Stephanie Weaver Lisa Wise Erik Zmuda Tanja Davidsen John A Demchok Greg Eley Martin L Ferguson Carolyn M Hutter Kenna R Mills Shaw Bradley A Ozenberger Margi Sheth Heidi J Sofia Roy Tarnuzzer Zhining Wang Liming Yang Jean Claude Zenklusen Brenda Ayala Julien Baboud Sudha Chudamani Mark A Jensen Jia Liu Todd Pihl Rohini Raman Yunhu Wan Ye Wu Adrian Ally J Todd Auman Miruna Balasundaram Saianand Balu Stephen B Baylin Rameen Beroukhim Moiz S Bootwalla Reanne Bowlby Christopher A Bristow Denise Brooks Yaron Butterfield Rebecca Carlsen Scott Carter Lynda Chin Andy Chu Eric Chuah Kristian Cibulskis Amanda Clarke Simon G Coetzee Noreen Dhalla Tim Fennell Sheila Fisher Stacey Gabriel Gad Getz Richard Gibbs Ranabir Guin Angela Hadjipanayis D Neil Hayes Toshinori Hinoue Katherine Hoadley Robert A Holt Alan P Hoyle Stuart R Jefferys Steven Jones Corbin D Jones Raju Kucherlapati Phillip H Lai Eric Lander Semin Lee Lee Lichtenstein Yussanne Ma Dennis T Maglinte Harshad S Mahadeshwar Marco A Marra Michael Mayo Shaowu Meng Matthew L Meyerson Piotr A Mieczkowski Richard A Moore Lisle E Mose Andrew J Mungall Angeliki Pantazi Michael Parfenov Peter J Park Joel S Parker Charles M Perou Alexei Protopopov Xiaojia Ren Jeffrey Roach Thaís S Sabedot Jacqueline Schein Steven E Schumacher Jonathan G Seidman Sahil Seth Hui Shen Janae V Simons Payal Sipahimalani Matthew G Soloway Xingzhi Song Huandong Sun Barbara Tabak Angela Tam Donghui Tan Jiabin Tang Nina Thiessen Timothy Triche David J Van Den Berg Umadevi Veluvolu Scot Waring Daniel J Weisenberger Matthew D Wilkerson Tina Wong Junyuan Wu Liu Xi Andrew W Xu Lixing Yang Travis I Zack Jianhua Zhang B Arman Aksoy Harindra Arachchi Chris Benz Brady Bernard Daniel Carlin Juok Cho Daniel DiCara Scott Frazer Gregory N Fuller JianJiong Gao Nils Gehlenborg David Haussler David I Heiman Lisa Iype Anders Jacobsen Zhenlin Ju Sol Katzman Hoon Kim Theo Knijnenburg Richard Bailey Kreisberg Michael S Lawrence William Lee Kalle Leinonen Pei Lin Shiyun Ling Wenbin Liu Yingchun Liu Yuexin Liu Yiling Lu Gordon Mills Sam Ng Michael S Noble Evan Paull Arvind Rao Sheila Reynolds Gordon Saksena Zack Sanborn Chris Sander Nikolaus Schultz Yasin Senbabaoglu Ronglai Shen Ilya Shmulevich Rileen Sinha Josh Stuart S Onur Sumer Yichao Sun Natalie Tasman Barry S Taylor Doug Voet Nils Weinhold John N Weinstein Da Yang Kosuke Yoshihara Siyuan Zheng Wei Zhang Lihua Zou Ty Abel Sara Sadeghi Mark L Cohen Jenny Eschbacher Eyas M Hattab Aditya Raghunathan Matthew J Schniederjan Dina Aziz Gene Barnett Wendi Barrett Darell D Bigner Lori Boice Cathy Brewer Chiara Calatozzolo Benito Campos Carlos Gilberto Carlotti Timothy A Chan Lucia Cuppini Erin Curley Stefania Cuzzubbo Karen Devine Francesco DiMeco Rebecca Duell J Bradley Elder Ashley Fehrenbach Gaetano Finocchiaro William Friedman Jordonna Fulop Johanna Gardner Beth Hermes Christel Herold-Mende Christine Jungk Ady Kendler Norman L Lehman Eric Lipp Ouida Liu Randy Mandt Mary McGraw Roger Mclendon Christopher McPherson Luciano Neder Phuong Nguyen Ardene Noss Raffaele Nunziata Quinn T Ostrom Cheryl Palmer Alessandro Perin Bianca Pollo Alexander Potapov Olga Potapova W Kimryn Rathmell Daniil Rotin Lisa Scarpace Cathy Schilero Kelly Senecal Kristen Shimmel Vsevolod Shurkhay Suzanne Sifri Rosy Singh Andrew E Sloan Kathy Smolenski Susan M Staugaitis Ruth Steele Leigh Thorne Daniela P C Tirapelli Andreas Unterberg Mahitha Vallurupalli Yun Wang Ronald Warnick Felicia Williams Yingli Wolinsky Sue Bell Mara Rosenberg Chip Stewart Franklin Huang Jonna L Grimsby Amie J Radenbaugh Jianan Zhang
June 2015

Highly recurrent TERT promoter mutations in human melanoma.

Science 2013 Feb 24;339(6122):957-9. Epub 2013 Jan 24.

Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA.

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http://dx.doi.org/10.1126/science.1229259DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423787PMC
February 2013

Health care workers in Africa access a broad range of topics using evidence-based online medical information.

Glob Public Health 2012 23;7(8):823-39. Epub 2012 May 23.

Department of Medicine, Weill-Cornell Medical College, New York, NY, USA.

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http://dx.doi.org/10.1080/17441692.2012.685488DOI Listing
December 2012

Skeletal muscle hemojuvelin is dispensable for systemic iron homeostasis.

Blood 2011 Jun 14;117(23):6319-25. Epub 2011 Apr 14.

Department of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, NC, USA.

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http://www.bloodjournal.org/cgi/doi/10.1182/blood-2010-12-32
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http://dx.doi.org/10.1182/blood-2010-12-327957DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3122950PMC
June 2011

Expansion of the health workforce and the HIV Epidemic.

N Engl J Med 2008 Apr;358(15):1640; author reply 1640

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April 2008

Modulation of bone morphogenetic protein signaling in vivo regulates systemic iron balance.

J Clin Invest 2007 Jul;117(7):1933-9

Program in Membrane Biology and Nephrology Division, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA.

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http://dx.doi.org/10.1172/JCI31342DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1904317PMC
July 2007

Bone morphogenetic protein signaling by hemojuvelin regulates hepcidin expression.

Nat Genet 2006 May 9;38(5):531-9. Epub 2006 Apr 9.

Program in Membrane Biology and Nephrology Division, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1038/ng1777DOI Listing
May 2006

Should we make a fuss? A case for social responsibility in science.

Nat Biotechnol 2005 Dec;23(12):1479-80

Department of Microbiology and Molecular Genetics, Harvard Medical School, 200 Longwood Avenue, Boston, Massachusetts 02115, USA.

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http://www.nature.com/articles/nbt1205-1479
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http://dx.doi.org/10.1038/nbt1205-1479DOI Listing
December 2005

A mouse model of juvenile hemochromatosis.

J Clin Invest 2005 Aug;115(8):2187-91

Children's Hospital Boston, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115-5737, USA.

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http://dx.doi.org/10.1172/JCI25049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1180543PMC
August 2005

Identification of a novel mutation (C321X) in HJV.

Blood 2004 Oct 11;104(7):2176-7. Epub 2004 May 11.

Division of Medical Sciences, Harvard University, Boston, MA, USA.

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http://dx.doi.org/10.1182/blood-2004-01-0400DOI Listing
October 2004

Training to think globally.

Nature 2002 Apr;416(6881):581

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http://dx.doi.org/10.1038/416581bDOI Listing
April 2002