Filippo M Rijli

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Filippo M Rijli

Publications by authors named "Filippo M Rijli"

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60Publications

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Integrating into the Rhombomere Community across the Border.

Dev Cell 2018 06;45(5):546-548

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; University of Basel, 4056 Basel, Switzerland. Electronic address:

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June 2018

The Long Journey of Pontine Nuclei Neurons: From Rhombic Lip to Cortico-Ponto-Cerebellar Circuitry.

Front Neural Circuits 2017 17;11:33. Epub 2017 May 17.

Friedrich Miescher Institute for Biomedical ResearchBasel, Switzerland.

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February 2018

Nuclear Pore Protein Meets Transcription Factor in Neural Fate.

Neuron 2017 Oct;96(2):259-261

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland. Electronic address:

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October 2017

Differing contributions of the first and second pharyngeal arches to tympanic membrane formation in the mouse and chick.

Development 2017 09 14;144(18):3315-3324. Epub 2017 Aug 14.

Section of Molecular Craniofacial Embryology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), 1-5-45 Yushima, Bunkyo-ku, Tokyo 113-8549, Japan.

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September 2017

A mutant with bilateral whisker to barrel inputs unveils somatosensory mapping rules in the cerebral cortex.

Elife 2017 03 28;6. Epub 2017 Mar 28.

Sorbonne Universités, UPMC Univ Paris 06, INSERM, CNRS, Institut de la Vision, Paris, France.

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March 2017

Gene bivalency at Polycomb domains regulates cranial neural crest positional identity.

Science 2017 03;355(6332)

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4051 Basel, Switzerland.

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March 2017

Prenatal thalamic waves regulate cortical area size prior to sensory processing.

Nat Commun 2017 Feb 3;8:14172. Epub 2017 Feb 3.

Instituto de Neurociencias de Alicante, Universidad Miguel Hernández-Consejo Superior de Investigaciones Científicas (UMH-CSIC), 03550 Sant Joan d'Alacant, Spain.

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February 2017

Hox2 Genes Are Required for Tonotopic Map Precision and Sound Discrimination in the Mouse Auditory Brainstem.

Cell Rep 2017 01;18(1):185-197

Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland; University of Basel, 4003 Basel, Switzerland. Electronic address:

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January 2017

Perinatal induction of Cre recombination with tamoxifen.

Transgenic Res 2015 Dec 22;24(6):1065-77. Epub 2015 Sep 22.

Institut des Sciences de la Vie, Université catholique de Louvain, 1348, Louvain-la-Neuve, Belgium.

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December 2015

Facial whisker pattern is not sufficient to instruct a whisker-related topographic map in the mouse somatosensory brainstem.

Development 2015 Nov 28;142(21):3704-12. Epub 2015 Sep 28.

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, Basel 4058, Switzerland University of Basel, Basel 4056, Switzerland

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November 2015

Hoxa2 Selects Barrelette Neuron Identity and Connectivity in the Mouse Somatosensory Brainstem.

Cell Rep 2015 Oct 17;13(4):783-797. Epub 2015 Oct 17.

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland; University of Basel, 4056 Basel, Switzerland. Electronic address:

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October 2015

MicroRNA-196b is transcribed from an autonomous promoter and is directly regulated by Cdx2 and by posterior Hox proteins during embryogenesis.

Biochim Biophys Acta 2015 Aug 2;1849(8):1066-80. Epub 2015 Jul 2.

Department of Life Sciences, University of Modena and Reggio Emilia, Via G. Campi 213/d, Modena 41125, Italy. Electronic address:

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August 2015

Distinct effects of Hoxa2 overexpression in cranial neural crest populations reveal that the mammalian hyomandibular-ceratohyal boundary maps within the styloid process.

Dev Biol 2015 Jun 16;402(2):162-74. Epub 2015 Apr 16.

Department of Physiological Chemistry and Metabolism, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Chiyoda-ku, Tokyo 102-0076, Japan; Institute for Biology and Mathematics of Dynamical Cell Processes (iBMath), The University of Tokyo, 3-8-1 Komaba, Tokyo 153-8914, Japan. Electronic address:

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June 2015

Parallel pathways from motor and somatosensory cortex for controlling whisker movements in mice.

Eur J Neurosci 2015 Feb 5;41(3):354-67. Epub 2014 Dec 5.

Laboratory of Sensory Processing, Brain Mind Institute, Faculty of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), CH-1015, Lausanne, Switzerland.

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February 2015

The Cre/Lox system to assess the development of the mouse brain.

Methods Mol Biol 2014 ;1082:295-313

Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.

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April 2014

Mouse Hoxa2 mutations provide a model for microtia and auricle duplication.

Development 2013 Nov 25;140(21):4386-97. Epub 2013 Sep 25.

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, CH-4058 Basel, Switzerland.

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November 2013

Preotic neural crest cells contribute to coronary artery smooth muscle involving endothelin signalling.

Nat Commun 2012 ;3:1267

Department of Physiological Chemistry and Metabolism, Graduate School of Medicine, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.

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June 2013

Evolutionary divergence of trigeminal nerve somatotopy in amniotes.

J Comp Neurol 2013 Apr;521(6):1378-94

Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104, Strasbourg, France.

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April 2013

Opposing roles for Hoxa2 and Hoxb2 in hindbrain oligodendrocyte patterning.

J Neurosci 2012 Nov;32(48):17172-85

Université Pierre and Marie Curie-Paris 6, Centre de Recherche de l'Institut du Cerveau et de la Moelle épinière, 75013 Paris, France.

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November 2012

Patterning of pre-thalamic somatosensory pathways.

Eur J Neurosci 2012 May;35(10):1533-9

Department of Basic Neurosciences and Clinic of Neurology, University of Geneva, Centre Medico-Universitaire, 1 rue Michel-Servet, CH 1211 Geneva 4, Switzerland.

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May 2012

Cdx regulates Dll1 in multiple lineages.

Dev Biol 2012 Jan 8;361(1):1-11. Epub 2011 Oct 8.

Department of Cellular and Molecular Medicine, University of Ottawa, 451 Smyth Road, Ottawa, Ontario, Canada.

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January 2012

Human teneurin-1 is a direct target of the homeobox transcription factor EMX2 at a novel alternate promoter.

BMC Dev Biol 2011 Jun 8;11:35. Epub 2011 Jun 8.

Friedrich Miescher Institute for Biomedical Research, Novartis Research Foundation, Basel, Switzerland.

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June 2011

Cdx mediates neural tube closure through transcriptional regulation of the planar cell polarity gene Ptk7.

Development 2011 Apr 24;138(7):1361-70. Epub 2011 Feb 24.

Department of Cellular and Molecular Medicine, University of Ottawa, 451 Smyth Road, Ottawa, ON K1H 8M5, Canada.

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April 2011

Ongoing roles of Phox2 homeodomain transcription factors during neuronal differentiation.

Development 2010 Dec 10;137(24):4211-20. Epub 2010 Nov 10.

Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Paris, France.

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December 2010

Molecular mechanisms of cranial neural crest cell migration and patterning in craniofacial development.

Development 2010 Aug;137(16):2605-21

Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland.

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August 2010

Mapping the face in the somatosensory brainstem.

Nat Rev Neurosci 2010 Apr 24;11(4):252-63. Epub 2010 Feb 24.

Department of Anatomy and Neurobiology, University of Maryland, School of Medicine, Baltimore, 21201 Maryland, USA.

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April 2010

Cdx2 regulation of posterior development through non-Hox targets.

Development 2009 Dec 11;136(24):4099-110. Epub 2009 Nov 11.

Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, K1H 8M5, Canada.

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December 2009

Hox genes in neural patterning and circuit formation in the mouse hindbrain.

Curr Top Dev Biol 2009 ;88:139-67

Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.

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September 2009

Transcriptional regulation of tangential neuronal migration in the developing forebrain.

Curr Opin Neurobiol 2009 Apr 8;19(2):139-45. Epub 2009 May 8.

INSERM UMRS_968, Institut de la Vision, Department of Development, 17 rue Moreau, 75012 Paris, France.

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April 2009

Rostral and caudal pharyngeal arches share a common neural crest ground pattern.

Development 2009 Feb;136(4):637-45

Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104, Strasbourg, France.

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February 2009

An ultraconserved Hox-Pbx responsive element resides in the coding sequence of Hoxa2 and is active in rhombomere 4.

Nucleic Acids Res 2008 Jun 16;36(10):3214-25. Epub 2008 Apr 16.

Unit of Developmental Genetics, Université Catholique de Louvain, 1200 Brussels, Belgium, Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104 CNRS/INSERM/ULP, Collège de France, BP 10142-CU de Strasbourg, 67404 Illkirch Cedex, France.

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June 2008

Hox paralog group 2 genes control the migration of mouse pontine neurons through slit-robo signaling.

PLoS Biol 2008 Jun;6(6):e142

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, UMR 7104, CU de Strasbourg, Illkirch, France.

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June 2008

Identification of Lmo1 as part of a Hox-dependent regulatory network for hindbrain patterning.

Dev Dyn 2007 Sep;236(9):2675-84

Unit of Developmental Genetics, Université Catholique de Louvain, Brussels, Belgium.

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September 2007

Fate-mapping the mammalian hindbrain: segmental origins of vestibular projection neurons assessed using rhombomere-specific Hoxa2 enhancer elements in the mouse embryo.

J Neurosci 2007 Sep;27(36):9670-81

Institut de Génétique et de Biologie Moléculaire et Cellulaire, Centre National de la Recherche Scientifique/Inserm/Université Louis Pasteur, Unité Mixte de Recherche 7104, Commanaute Urbaine de Strasbourg, 67404 Illkirch Cedex, France.

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September 2007

Distinct roles of Hoxa2 and Krox20 in the development of rhythmic neural networks controlling inspiratory depth, respiratory frequency, and jaw opening.

Neural Dev 2007 Sep 26;2:19. Epub 2007 Sep 26.

NGI, UPR 2216, Institut de Neurobiologie Alfred Fessard IFR2218, Centre National de Recherche Scientifique, F-91198 Gif sur Yvette Cedex, France.

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September 2007

Hox gene expression patterns in Lethenteron japonicum embryos--insights into the evolution of the vertebrate Hox code.

Dev Biol 2007 Aug 17;308(2):606-20. Epub 2007 May 17.

RIKEN Center for Developmental Biology, Evolutionary Morphology Research Group, 2-2-3 Minatojima Minamimachi, Chuo-ku, Kobe 650-0047, Japan.

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August 2007

[Hoxa2: a key gene for the facial somatosensory map].

Med Sci (Paris) 2007 Mar;23(3):247-9

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March 2007

Hoxa2- and rhombomere-dependent development of the mouse facial somatosensory map.

Science 2006 Sep 10;313(5792):1408-13. Epub 2006 Aug 10.

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/Université Louis Pasteur, UMR 7104, BP 10142, Communauté Urbaine de Strasbourg, 67404 Illkirch Cedex, France.

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September 2006

Retinoic acid and hindbrain patterning.

J Neurobiol 2006 Jun;66(7):705-25

Department of Physiology, PB 1103 Blindern, University of Oslo, 0317 Oslo, Norway.

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June 2006

Hoxa2 knockdown in Xenopus results in hyoid to mandibular homeosis.

Dev Dyn 2005 Dec;234(4):858-67

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, Strasbourg, France.

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December 2005

Temporal requirement of Hoxa2 in cranial neural crest skeletal morphogenesis.

Development 2005 Nov 12;132(22):4927-36. Epub 2005 Oct 12.

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, UMR 7104, BP 10142, CU de Strasbourg, 67404 Illkirch Cedex, France.

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November 2005

Evolution of the brain developmental plan: Insights from agnathans.

Dev Biol 2005 Apr;280(2):249-59

Institut de Génétique et de Biologie Moléculaire et Cellulaire, UMR 7104, CNRS/INSERM/ULP, Illkirch Cedex, CU de Strasbourg, France.

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April 2005

Integration of anteroposterior and dorsoventral regulation of Phox2b transcription in cranial motoneuron progenitors by homeodomain proteins.

Development 2004 Aug;131(16):4071-83

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS UMR7104, BP 10142-67404 Illkirch Cedex, CU de Strasbourg, France.

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August 2004

Evolutionary biology: lamprey Hox genes and the evolution of jaws.

Nature 2004 May;429(6989):1 p following 262

Laboratory for Evolutionary Morphology, Center for Developmental Biology, RIKEN Kobe, 2-2-3 Minatojima-minami, Kobe 650-0047, Japan.

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May 2004

From hindbrain segmentation to breathing after birth: developmental patterning in rhombomeres 3 and 4.

Mol Neurobiol 2003 Dec;28(3):277-94

UPR 2216 Neurobiologie Génétique et Intégrative, Institut de Neurobiologie Alfred Fessard, CNRS, 1 avenue de la Terrasse, 91198 Gif-sur-Yvette, France.

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December 2003

Cranial neural crest and the building of the vertebrate head.

Nat Rev Neurosci 2003 Oct;4(10):806-18

Institut de Génétique et de Biologie Moléculaire et Cellulaire, Centre National de la Recherche Scientifique, Université Lousis Pasteur, BP 10142-67404 Illkirch Cedex, CU de Strasbourg, France.

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October 2003

Targeted insertion results in a rhombomere 2-specific Hoxa2 knockdown and ectopic activation of Hoxa1 expression.

Dev Dyn 2002 Nov;225(3):305-15

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, Collège de France, Illkirch Cedex, CU de Strasbourg, France.

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November 2002

A Hoxa2 mutant conditional allele generated by Flp- and Cre-mediated recombination.

Genesis 2002 Feb;32(2):105-8

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, Collège de France, Strasbourg, France.

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February 2002

A Hoxa2 knockin allele that expresses EGFP upon conditional Cre-mediated recombination.

Genesis 2002 Feb;32(2):109-11

Institut de Génétique et de Biologie Moléculaire et Cellulaire, CNRS/INSERM/ULP, Collège de France, Strasbourg, France.

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February 2002