Publications by authors named "Fernando L Mendez"

22Publications

Differences in the effective population sizes of males and females do not require differences in their distribution of offspring number.

Theor Popul Biol 2017 04 30;114:19-28. Epub 2016 Nov 30.

Department of Genetics, Stanford University, Stanford, CA 94305, United States. Electronic address:

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http://dx.doi.org/10.1016/j.tpb.2016.11.002DOI Listing
April 2017

The Divergence of Neandertal and Modern Human Y Chromosomes.

Am J Hum Genet 2016 Apr;98(4):728-34

Department of Genetics, Stanford University, Stanford, CA 94305, USA; Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2016.02.023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4833433PMC
April 2016

A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

Authors:
Monika Karmin Lauri Saag Mário Vicente Melissa A Wilson Sayres Mari Järve Ulvi Gerst Talas Siiri Rootsi Anne-Mai Ilumäe Reedik Mägi Mario Mitt Luca Pagani Tarmo Puurand Zuzana Faltyskova Florian Clemente Alexia Cardona Ene Metspalu Hovhannes Sahakyan Bayazit Yunusbayev Georgi Hudjashov Michael DeGiorgio Eva-Liis Loogväli Christina Eichstaedt Mikk Eelmets Gyaneshwer Chaubey Kristiina Tambets Sergei Litvinov Maru Mormina Yali Xue Qasim Ayub Grigor Zoraqi Thorfinn Sand Korneliussen Farida Akhatova Joseph Lachance Sarah Tishkoff Kuvat Momynaliev François-Xavier Ricaut Pradiptajati Kusuma Harilanto Razafindrazaka Denis Pierron Murray P Cox Gazi Nurun Nahar Sultana Rane Willerslev Craig Muller Michael Westaway David Lambert Vedrana Skaro Lejla Kovačevic Shahlo Turdikulova Dilbar Dalimova Rita Khusainova Natalya Trofimova Vita Akhmetova Irina Khidiyatova Daria V Lichman Jainagul Isakova Elvira Pocheshkhova Zhaxylyk Sabitov Nikolay A Barashkov Pagbajabyn Nymadawa Evelin Mihailov Joseph Wee Tien Seng Irina Evseeva Andrea Bamberg Migliano Syafiq Abdullah George Andriadze Dragan Primorac Lubov Atramentova Olga Utevska Levon Yepiskoposyan Damir Marjanovic Alena Kushniarevich Doron M Behar Christian Gilissen Lisenka Vissers Joris A Veltman Elena Balanovska Miroslava Derenko Boris Malyarchuk Andres Metspalu Sardana Fedorova Anders Eriksson Andrea Manica Fernando L Mendez Tatiana M Karafet Krishna R Veeramah Neil Bradman Michael F Hammer Ludmila P Osipova Oleg Balanovsky Elza K Khusnutdinova Knut Johnsen Maido Remm Mark G Thomas Chris Tyler-Smith Peter A Underhill Eske Willerslev Rasmus Nielsen Mait Metspalu Richard Villems Toomas Kivisild

Genome Res 2015 Apr 13;25(4):459-66. Epub 2015 Mar 13.

Estonian Biocentre, Tartu, 51010, Estonia; Division of Biological Anthropology, University of Cambridge, Cambridge, CB2 1QH, United Kingdom;

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https://bib.irb.hr/datoteka/715300.2015_Genome_Res._Karmin-A
Web Search
http://genome.cshlp.org/lookup/doi/10.1101/gr.186684.114
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http://dx.doi.org/10.1101/gr.186684.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381518PMC
April 2015

Reply to 'The 'extremely ancient' chromosome that isn't' by Elhaik et al.

Eur J Hum Genet 2015 May 15;23(5):564-7. Epub 2014 Oct 15.

ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2014.148DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4402626PMC
May 2015

Gibbon genome and the fast karyotype evolution of small apes.

Nature 2014 Sep;513(7517):195-201

Human Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA.

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http://dx.doi.org/10.1038/nature13679DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4249732PMC
September 2014

Improved phylogenetic resolution and rapid diversification of Y-chromosome haplogroup K-M526 in Southeast Asia.

Eur J Hum Genet 2015 Mar 4;23(3):369-73. Epub 2014 Jun 4.

1] ARL Division of Biotechnology, University of Arizona, Tucson, AZ, USA [2] School of Anthropology, University of Arizona, Tucson, AZ, USA.

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http://dx.doi.org/10.1038/ejhg.2014.106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326703PMC
March 2015

Neandertal origin of genetic variation at the cluster of OAS immunity genes.

Mol Biol Evol 2013 Apr 12;30(4):798-801. Epub 2013 Jan 12.

Department of Ecology and Evolutionary Biology, University of Arizona, Arizona, USA.

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http://dx.doi.org/10.1093/molbev/mst004DOI Listing
April 2013

Global genetic variation at OAS1 provides evidence of archaic admixture in Melanesian populations.

Mol Biol Evol 2012 Jun 16;29(6):1513-20. Epub 2012 Jan 16.

Department of Ecology and Evolutionary Biology, University of Arizona, USA.

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http://dx.doi.org/10.1093/molbev/msr301DOI Listing
June 2012

Genetic evidence for archaic admixture in Africa.

Proc Natl Acad Sci U S A 2011 Sep 6;108(37):15123-8. Epub 2011 Sep 6.

Arizona Research Laboratories, Division of Biotechnology, Department of Ecology and Evolutionary Biology, and Mathematics Department, University of Arizona, Tucson, AZ 85721, USA.

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http://dx.doi.org/10.1073/pnas.1109300108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3174671PMC
September 2011

The ratio of human X chromosome to autosome diversity is positively correlated with genetic distance from genes.

Nat Genet 2010 Oct 29;42(10):830-1. Epub 2010 Aug 29.

Arizona Research Laboratories, Division of Biotechnology, University of Arizona, Tucson, Arizona, USA.

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http://dx.doi.org/10.1038/ng.651DOI Listing
October 2010

Sex-biased evolutionary forces shape genomic patterns of human diversity.

PLoS Genet 2008 Sep 26;4(9):e1000202. Epub 2008 Sep 26.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona, USA.

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http://dx.plos.org/10.1371/journal.pgen.1000202
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http://dx.doi.org/10.1371/journal.pgen.1000202DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2538571PMC
September 2008

A novel DNA sequence database for analyzing human demographic history.

Genome Res 2008 Aug 20;18(8):1354-61. Epub 2008 May 20.

Institute for Human Genetics and Department of Epidemiology and Biostatistics, University of California San Francisco, San Francisco, CA 94143, USA.

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http://dx.doi.org/10.1101/gr.075630.107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2493425PMC
August 2008

New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree.

Genome Res 2008 May 2;18(5):830-8. Epub 2008 Apr 2.

ARL Division of Biotechnology, University of Arizona, Tucson, Arizona 85721, USA.

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http://dx.doi.org/10.1101/gr.7172008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2336805PMC
May 2008