Federico Comoglio

Federico Comoglio

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Federico Comoglio

Federico Comoglio

Publications by authors named "Federico Comoglio"

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28Publications

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Dissection of acute stimulus-inducible nucleosome remodeling in mammalian cells.

Genes Dev 2019 09 1;33(17-18):1159-1174. Epub 2019 Aug 1.

Humanitas University (Hunimed), Pieve Emanuele, Milano 20090, Italy.

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http://dx.doi.org/10.1101/gad.326348.119DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6719622PMC
September 2019

Promoter-Intrinsic and Local Chromatin Features Determine Gene Repression in LADs.

Cell 2019 May 11;177(4):852-864.e14. Epub 2019 Apr 11.

Division of Gene Regulation and Oncode Institute, Netherlands Cancer Institute, Amsterdam, the Netherlands. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2019.03.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6506275PMC
May 2019

MicroRNA-101 expression is associated with JAK2V617F activity and regulates JAK2/STAT5 signaling.

Leukemia 2018 08 27;32(8):1826-1830. Epub 2018 Feb 27.

Cambridge Institute for Medical Research and Wellcome Trust/MRC Stem Cell Institute, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK.

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http://dx.doi.org/10.1038/s41375-018-0053-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5989937PMC
August 2018

Hoxa9 and Meis1 Cooperatively Induce Addiction to Syk Signaling by Suppressing miR-146a in Acute Myeloid Leukemia.

Cancer Cell 2017 04;31(4):549-562.e11

Department of Medicine II, Hematology/Oncology, Goethe University, Theodor-Stern-Kai 7, 60590 Frankfurt, Germany; Department of Haematology, University of Cambridge, Hills Road, Cambridge CB2 0XY, UK; Cambridge Institute for Medical Research, Wellcome Trust/MRC Stem Cell Institute, Cambridge CB2 0XY, UK; German Cancer Research Center and German Cancer Consortium, 69120 Heidelberg, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2017.03.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389883PMC
April 2017

A High-Density Map for Navigating the Human Polycomb Complexome.

Cell Rep 2016 10;17(2):583-595

Department of Biosystems Science and Engineering, ETH Zürich, 4058 Basel, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2016.08.096DOI Listing
October 2016

Elucidation of tonic and activated B-cell receptor signaling in Burkitt's lymphoma provides insights into regulation of cell survival.

Proc Natl Acad Sci U S A 2016 May 6;113(20):5688-93. Epub 2016 May 6.

Hematology/Oncology, Department of Medicine, Johann Wolfgang Goethe University, 60590 Frankfurt, Germany; Department of Haematology, Cambridge Institute of Medical Research, University of Cambridge, Cambridge CB2 0XY, United Kingdom; German Cancer Consortium/German Cancer Research Center, 69120 Heidelberg, Germany;

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http://dx.doi.org/10.1073/pnas.1601053113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4878517PMC
May 2016

DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding.

Bioinformatics 2016 04 14;32(8):1211-3. Epub 2015 Dec 14.

Molecular and Computational Biology Program, Departments of Biological Sciences, Chemistry, Physics, and Computer Science, University of Southern California, Los Angeles, CA 90089, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/btv735DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824130PMC
April 2016

During Drosophila disc regeneration, JAK/STAT coordinates cell proliferation with Dilp8-mediated developmental delay.

Proc Natl Acad Sci U S A 2015 May 20;112(18):E2327-36. Epub 2015 Apr 20.

Department of Biosystems Science and Engineering, Eidgenössische Technische Hochschule Zürich, 4058 Basel, Switzerland; Faculty of Science, University of Basel, 4056 Basel, Switzerland

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http://dx.doi.org/10.1073/pnas.1423074112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4426433PMC
May 2015

High-resolution profiling of Drosophila replication start sites reveals a DNA shape and chromatin signature of metazoan origins.

Cell Rep 2015 May 23;11(5):821-34. Epub 2015 Apr 23.

Department of Biosystems Science and Engineering, ETH Zürich, Mattenstrasse 26, 4058 Basel, Switzerland; Faculty of Science, University of Basel, Klingelbergstrasse 50, 4056 Basel, Switzerland. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S22111247150036
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http://dx.doi.org/10.1016/j.celrep.2015.03.070DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4562395PMC
May 2015

Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data.

BMC Bioinformatics 2015 Feb 1;16:32. Epub 2015 Feb 1.

Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology Zurich, Mattenstrasse 26, Basel, 4058, Switzerland.

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http://dx.doi.org/10.1186/s12859-015-0470-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4339748PMC
February 2015

A deterministic analysis of genome integrity during neoplastic growth in Drosophila.

PLoS One 2014 6;9(2):e87090. Epub 2014 Feb 6.

Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology Zurich, Basel, Switzerland ; Faculty of Science, University of Basel, Basel, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0087090PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3916295PMC
January 2015

Bayesian inference from count data using discrete uniform priors.

PLoS One 2013 7;8(10):e74388. Epub 2013 Oct 7.

Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology Zürich, Basel, Switzerland.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0074388PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3792115PMC
June 2014

Combinatorial modeling of chromatin features quantitatively predicts DNA replication timing in Drosophila.

PLoS Comput Biol 2014 Jan 23;10(1):e1003419. Epub 2014 Jan 23.

Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland ; Faculty of Science, University of Basel, Basel, Switzerland.

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http://dx.doi.org/10.1371/journal.pcbi.1003419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3900380PMC
January 2014

Mixture models and wavelet transforms reveal high confidence RNA-protein interaction sites in MOV10 PAR-CLIP data.

Nucleic Acids Res 2012 Nov 28;40(20):e160. Epub 2012 Jul 28.

Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology Zurich, Mattenstrasse 26, 4058 Basel, Switzerland.

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http://dx.doi.org/10.1093/nar/gks697DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488208PMC
November 2012

Network-of-queues approach to B-cell-receptor affinity discrimination.

Phys Rev E Stat Nonlin Soft Matter Phys 2012 Jun 28;85(6 Pt 1):061926. Epub 2012 Jun 28.

Department of Biosystems Science and Engineering, Swiss Federal Institute of Technology (ETH) Zurich, Mattenstrasse 26, CH-4058 Basel, Switzerland.

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http://dx.doi.org/10.1103/PhysRevE.85.061926DOI Listing
June 2012

Rknots: topological analysis of knotted biopolymers with R.

Bioinformatics 2012 May 5;28(10):1400-1. Epub 2012 Apr 5.

Department of Biosystems Science and Engineering, ETH Zurich, Basel, CH-4058, Switzerland.

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http://dx.doi.org/10.1093/bioinformatics/bts160DOI Listing
May 2012

A topological framework for the computation of the HOMFLY polynomial and its application to proteins.

PLoS One 2011 Apr 13;6(4):e18693. Epub 2011 Apr 13.

Department of Chemical, Food, Pharmaceutical and Pharmacological Sciences (DiSCAFF), University of Piemonte Orientale Amedeo Avogadro, Novara, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0018693PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3076383PMC
April 2011

MicroRNA signature of malignant mesothelioma with potential diagnostic and prognostic implications.

Am J Respir Cell Mol Biol 2010 Mar 5;42(3):312-9. Epub 2009 Jun 5.

Dipartimento di Scienze Chimiche, Alimentari, Farmaceutiche e Farmacologiche, University of Piemonte Orientale, Novara, Italy.

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http://dx.doi.org/10.1165/rcmb.2009-0060OCDOI Listing
March 2010