Farzana Jasmine

Farzana Jasmine

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Farzana Jasmine

Publications by authors named "Farzana Jasmine"

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The association between smoking and gut microbiome in Bangladesh.

Nicotine Tob Res 2019 Dec 3. Epub 2019 Dec 3.

Departments of Population Health and Environmental Medicine, New York University School of Medicine, New York, NY.

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http://dx.doi.org/10.1093/ntr/ntz220DOI Listing
December 2019

The role of gut microbiome and its interaction with arsenic exposure in carotid intima-media thickness in a Bangladesh population.

Environ Int 2019 02 29;123:104-113. Epub 2018 Nov 29.

Department of Population Health, New York University School of Medicine, New York, NY, USA; Department of Environmental Medicine, New York University School of Medicine, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.envint.2018.11.049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371773PMC
February 2019

Lack of Association between Opioid-Receptor Genotypes and Smoking Cessation Outcomes in a Randomized, Controlled Naltrexone Trial.

Alcohol Alcohol 2019 Jan;54(5):559-565

Department of Psychiatry and Behavioral Sciences, University of Chicago, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1093/alcalc/agz046DOI Listing
January 2019

Maternal cigarette smoking during pregnancy and offspring DNA methylation in midlife.

Epigenetics 2018 8;13(2):129-134. Epub 2018 Feb 8.

a Department of Epidemiology, Columbia University Mailman School of Public Health, New York, NY, USA.

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http://dx.doi.org/10.1080/15592294.2017.1325065DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5873358PMC
December 2018

A novel pooled-sample multiplex luminex assay for high-throughput measurement of relative telomere length.

Am J Hum Biol 2018 07 12;30(4):e23118. Epub 2018 Mar 12.

Department of Public Health Sciences, Biological Sciences Division, University of Chicago, Chicago, Illinois.

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http://dx.doi.org/10.1002/ajhb.23118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6105449PMC
July 2018

A study of telomere length, arsenic exposure, and arsenic toxicity in a Bangladeshi cohort.

Environ Res 2018 07 20;164:346-355. Epub 2018 Mar 20.

Department of Public Health Sciences, University of Chicago, Chicago, IL 60615, United States; Department of Human Genetics, University of Chicago, Chicago, IL 60615, United States; Comprehensive Cancer Center, University of Chicago, Chicago, IL 60615, United States. Electronic address:

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http://dx.doi.org/10.1016/j.envres.2018.03.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6647858PMC
July 2018

Novel Luminex Assay for Telomere Repeat Mass Does Not Show Well Position Effects Like qPCR.

PLoS One 2016 16;11(5):e0155548. Epub 2016 May 16.

Department of Public Health Sciences, Biological Science Division, The University of Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0155548PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4868509PMC
July 2017

Genetically Predicted Body Mass Index and Breast Cancer Risk: Mendelian Randomization Analyses of Data from 145,000 Women of European Descent.

Authors:
Yan Guo Shaneda Warren Andersen Xiao-Ou Shu Kyriaki Michailidou Manjeet K Bolla Qin Wang Montserrat Garcia-Closas Roger L Milne Marjanka K Schmidt Jenny Chang-Claude Allison Dunning Stig E Bojesen Habibul Ahsan Kristiina Aittomäki Irene L Andrulis Hoda Anton-Culver Volker Arndt Matthias W Beckmann Alicia Beeghly-Fadiel Javier Benitez Natalia V Bogdanova Bernardo Bonanni Anne-Lise Børresen-Dale Judith Brand Hiltrud Brauch Hermann Brenner Thomas Brüning Barbara Burwinkel Graham Casey Georgia Chenevix-Trench Fergus J Couch Angela Cox Simon S Cross Kamila Czene Peter Devilee Thilo Dörk Martine Dumont Peter A Fasching Jonine Figueroa Dieter Flesch-Janys Olivia Fletcher Henrik Flyger Florentia Fostira Marilie Gammon Graham G Giles Pascal Guénel Christopher A Haiman Ute Hamann Maartje J Hooning John L Hopper Anna Jakubowska Farzana Jasmine Mark Jenkins Esther M John Nichola Johnson Michael E Jones Maria Kabisch Muhammad Kibriya Julia A Knight Linetta B Koppert Veli-Matti Kosma Vessela Kristensen Loic Le Marchand Eunjung Lee Jingmei Li Annika Lindblom Robert Luben Jan Lubinski Kathi E Malone Arto Mannermaa Sara Margolin Frederik Marme Catriona McLean Hanne Meijers-Heijboer Alfons Meindl Susan L Neuhausen Heli Nevanlinna Patrick Neven Janet E Olson Jose I A Perez Barbara Perkins Paolo Peterlongo Kelly-Anne Phillips Katri Pylkäs Anja Rudolph Regina Santella Elinor J Sawyer Rita K Schmutzler Caroline Seynaeve Mitul Shah Martha J Shrubsole Melissa C Southey Anthony J Swerdlow Amanda E Toland Ian Tomlinson Diana Torres Thérèse Truong Giske Ursin Rob B Van Der Luijt Senno Verhoef Alice S Whittemore Robert Winqvist Hui Zhao Shilin Zhao Per Hall Jacques Simard Peter Kraft Paul Pharoah David Hunter Douglas F Easton Wei Zheng

PLoS Med 2016 08 23;13(8):e1002105. Epub 2016 Aug 23.

Division of Epidemiology, Department of Medicine, Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, Nashville, Tennessee, United States of America.

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http://dx.doi.org/10.1371/journal.pmed.1002105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4995025PMC
August 2016

Epigenetic Alterations and Canonical Pathway Disruption in Papillary Thyroid Cancer: A Genome-wide Methylation Analysis.

Ann Surg Oncol 2016 07 15;23(7):2302-9. Epub 2016 Mar 15.

Endocrine Surgery Research Program, Department of Surgery, The University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.1245/s10434-016-5185-4DOI Listing
July 2016

Association of genetic susceptibility variants for type 2 diabetes with breast cancer risk in women of European ancestry.

Authors:
Zhiguo Zhao Wanqing Wen Kyriaki Michailidou Manjeet K Bolla Qin Wang Ben Zhang Jirong Long Xiao-Ou Shu Marjanka K Schmidt Roger L Milne Montserrat García-Closas Jenny Chang-Claude Sara Lindstrom Stig E Bojesen Habibul Ahsan Kristiina Aittomäki Irene L Andrulis Hoda Anton-Culver Volker Arndt Matthias W Beckmann Alicia Beeghly-Fadiel Javier Benitez Carl Blomqvist Natalia V Bogdanova Anne-Lise Børresen-Dale Judith Brand Hiltrud Brauch Hermann Brenner Barbara Burwinkel Qiuyin Cai Graham Casey Georgia Chenevix-Trench Fergus J Couch Angela Cox Simon S Cross Kamila Czene Thilo Dörk Martine Dumont Peter A Fasching Jonine Figueroa Dieter Flesch-Janys Olivia Fletcher Henrik Flyger Florentia Fostira Marilie Gammon Graham G Giles Pascal Guénel Christopher A Haiman Ute Hamann Patricia Harrington Mikael Hartman Maartje J Hooning John L Hopper Anna Jakubowska Farzana Jasmine Esther M John Nichola Johnson Maria Kabisch Sofia Khan Muhammad Kibriya Julia A Knight Veli-Matti Kosma Mieke Kriege Vessela Kristensen Loic Le Marchand Eunjung Lee Jingmei Li Annika Lindblom Artitaya Lophatananon Robert Luben Jan Lubinski Kathleen E Malone Arto Mannermaa Siranoush Manoukian Sara Margolin Frederik Marme Catriona McLean Hanne Meijers-Heijboer Alfons Meindl Hui Miao Kenneth Muir Susan L Neuhausen Heli Nevanlinna Patrick Neven Janet E Olson Barbara Perkins Paolo Peterlongo Kelly-Anne Phillips Katri Pylkäs Anja Rudolph Regina Santella Elinor J Sawyer Rita K Schmutzler Minouk Schoemaker Mitul Shah Martha Shrubsole Melissa C Southey Anthony J Swerdlow Amanda E Toland Ian Tomlinson Diana Torres Thérèse Truong Giske Ursin Rob B Van Der Luijt Senno Verhoef Shan Wang-Gohrke Alice S Whittemore Robert Winqvist M Pilar Zamora Hui Zhao Alison M Dunning Jacques Simard Per Hall Peter Kraft Paul Pharoah David Hunter Douglas F Easton Wei Zheng

Cancer Causes Control 2016 May 6;27(5):679-93. Epub 2016 Apr 6.

Division of Epidemiology, Department of Medicine, Vanderbilt-Ingram Cancer Center, Vanderbilt University School of Medicine, 2525 West End Avenue, 8th Floor, Nashville, TN, 37203-1738, USA.

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http://dx.doi.org/10.1007/s10552-016-0741-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5029371PMC
May 2016

Telomere length measurement by a novel Luminex-based assay: a blinded comparison to Southern blot.

Int J Mol Epidemiol Genet 2016 23;7(1):18-23. Epub 2016 Mar 23.

Department of Public Health Sciences, University of Chicago Chicago IL 60615, Chicago, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4858612PMC
May 2016

DNA methylation and hormone receptor status in breast cancer.

Clin Epigenetics 2016 16;8:17. Epub 2016 Feb 16.

Division of Epidemiology and Biostatistics, School of Public Health, University of Illinois at Chicago (UIC), M/C 923, Chicago, 60612 IL USA.

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http://dx.doi.org/10.1186/s13148-016-0184-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4754852PMC
April 2016

Genome-wide association study of parity in Bangladeshi women.

PLoS One 2015 5;10(3):e0118488. Epub 2015 Mar 5.

Department of Health Studies, The University of Chicago, Chicago, Illinois, United States of America; Comprehensive Cancer Center, The University of Chicago, Chicago, Illinois, United States of America; Departments of Medicine and Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0118488PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4350917PMC
February 2016

Arsenic exposure, telomere length, and expression of telomere-related genes among Bangladeshi individuals.

Environ Res 2015 Jan 25;136:462-9. Epub 2014 Nov 25.

Department of Public Health Sciences, The University of Chicago, Chicago, IL 60637, USA; Comprehensive Cancer Center, The University of Chicago, Chicago, IL 60637, USA. Electronic address:

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http://dx.doi.org/10.1016/j.envres.2014.09.040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4264833PMC
January 2015

Measurement of telomere length: a new assay using QuantiGene chemistry on a Luminex platform.

Cancer Epidemiol Biomarkers Prev 2014 Dec;23(12):2667-72

Department of Health Studies, Biological Sciences Division, the University of Chicago, Chicago, Illinois. Comprehensive Cancer Center, the University of Chicago, Chicago, Illinois.

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http://dx.doi.org/10.1158/1055-9965.EPI-14-0610DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256718PMC
December 2014

Mediation analysis demonstrates that trans-eQTLs are often explained by cis-mediation: a genome-wide analysis among 1,800 South Asians.

PLoS Genet 2014 Dec 4;10(12):e1004818. Epub 2014 Dec 4.

Department of Public Health Sciences, The University of Chicago, Chicago, Illinois, United States of America; Comprehensive Cancer Center, The University of Chicago, Chicago, Illinois, United States of America; Department of Medicine The University of Chicago, Chicago, Illinois, United States of America; Department of Human Genetics, The University of Chicago, Chicago, Illinois, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1004818DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4256471PMC
December 2014

Interaction between arsenic exposure from drinking water and genetic susceptibility in carotid intima-media thickness in Bangladesh.

Toxicol Appl Pharmacol 2014 May 2;276(3):195-203. Epub 2014 Mar 2.

Department of Population Health, New York University School of Medicine, New York, NY, USA; Department of Environmental Medicine, New York University School of Medicine, New York, NY, USA. Electronic address:

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http://dx.doi.org/10.1016/j.taap.2014.02.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4080412PMC
May 2014

A genome-wide association study of early-onset breast cancer identifies PFKM as a novel breast cancer gene and supports a common genetic spectrum for breast cancer at any age.

Cancer Epidemiol Biomarkers Prev 2014 Apr 3;23(4):658-69. Epub 2014 Feb 3.

Authors' Affiliations: Center for Cancer Epidemiology and Prevention; Departments of Health Studies, Medicine, and Human Genetics; Comprehensive Cancer Center, University of Chicago, Chicago, Illinois; Department of Health Research and Policy, Stanford University School of Medicine; Stanford Cancer Institute, Stanford; Cancer Prevention Institute of California, Fremont; Department of Preventive Medicine, University of Southern California, Los Angeles; Stanford Cancer Institute, Palo Alto, California; Epidemiology and Genetics Research Program; Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, Maryland; Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington; Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina; Department of Environmental Health Sciences, Columbia University Mailman School of Public Health, New York, New York; Integrated Cancer Genomics Division, Translational Genomics Research Institute, Phoenix; Department of Health Science Research, Mayo Clinic Arizona, Scottsdale, Arizona; Program in Molecular and Genetic Epidemiology, Harvard School of Public Health, Boston, Massachusetts; Division of Cancer Epidemiology, German Cancer Research Center, Heidelberg; Clinic of Gynaecology and Obstetrics, Division for Gynaecological Tumor-Genetics, Technische Universität München; Max Planck Institute of Psychiatry, Munich; Department of Obstetrics and Gynaecology, Division of Molecular Gynaeco-Oncology, PMV Research Group at the Department of Child and Adolescent Psychiatry and Psychotherapy, University of Cologne; Foundation for Quality and Efficiency in Health Care, Cologne; Department of Cancer Epidemiology/Clinical Cancer Registry; Institute for Medical Biometrics and Epidemiology, University Clinic Hamburg-Eppendorf, Hamburg; Department of Psychiatry, University of Mainz, Mainz, Germany; Samuel Lunenfeld Research Institute; Zane Cohen Cen

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http://dx.doi.org/10.1158/1055-9965.EPI-13-0340DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3990360PMC
April 2014

Exploring genome-wide DNA methylation profiles altered in hepatocellular carcinoma using Infinium HumanMethylation 450 BeadChips.

Epigenetics 2013 Jan 3;8(1):34-43. Epub 2012 Dec 3.

Department of Environmental Health Sciences, Mailman School of Public Health of Columbia University, New York, NY, USA.

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http://dx.doi.org/10.4161/epi.23062DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3549879PMC
January 2013

Genome-wide aberrant DNA methylation of microRNA host genes in hepatocellular carcinoma.

Epigenetics 2012 Nov 13;7(11):1230-7. Epub 2012 Sep 13.

Department of Environmental Health Sciences, Mailman School of Public Health of Columbia University, New York, NY USA.

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http://dx.doi.org/10.4161/epi.22140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3499324PMC
November 2012

Genome-wide DNA methylation profiles in hepatocellular carcinoma.

Hepatology 2012 Jun 24;55(6):1799-808. Epub 2012 Apr 24.

Department of Environmental Health Sciences, Columbia University, New York, NY 10032, USA.

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http://dx.doi.org/10.1002/hep.25569DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3330167PMC
June 2012

Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues.

BMC Genomics 2010 Nov 8;11:622. Epub 2010 Nov 8.

Department of Health Studies, The University of Chicago, 5841 S, Maryland Avenue, MC 2007, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1186/1471-2164-11-622DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3091761PMC
November 2010

A pilot genome-wide association study of early-onset breast cancer.

Breast Cancer Res Treat 2009 Apr 8;114(3):463-77. Epub 2008 May 8.

Department of Health Studies, The University of Chicago, 5841 S. Maryland Avenue, MC 2007, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1007/s10549-008-0039-9DOI Listing
April 2009

Do placental genes affect maternal breast cancer? Association between offspring's CGB5 and CSH1 gene variants and maternal breast cancer risk.

Cancer Res 2008 Dec;68(23):9729-34

Department of Environmental Medicine, New York University Cancer Institute, New York University School of Medicine, New York, NY, USA.

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http://dx.doi.org/10.1158/0008-5472.CAN-08-2243DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2779753PMC
December 2008

Whole-genome amplification enables accurate genotyping for microarray-based high-density single nucleotide polymorphism array.

Cancer Epidemiol Biomarkers Prev 2008 Dec;17(12):3499-508

Department of Health Studies, The University of Chicago, 5841 South Maryland Avenue, MC 2007, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1158/1055-9965.EPI-08-0482DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2871542PMC
December 2008

Arsenic metabolism, genetic susceptibility, and risk of premalignant skin lesions in Bangladesh.

Cancer Epidemiol Biomarkers Prev 2007 Jun;16(6):1270-8

Departments of Epidemiology, Columbia University, USA.

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http://dx.doi.org/10.1158/1055-9965.EPI-06-0676DOI Listing
June 2007

Gene expression profiles in peripheral lymphocytes by arsenic exposure and skin lesion status in a Bangladeshi population.

Cancer Epidemiol Biomarkers Prev 2006 Jul;15(7):1367-75

Department of Epidemiology, Mailman School of Public Health, Columbia University Medical Center, New York, NY 10032, USA.

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http://dx.doi.org/10.1158/1055-9965.EPI-06-0106DOI Listing
July 2006