Fabio Polticelli

DockingApp RF: A State-of-the-Art Novel Scoring Function for Molecular Docking in a User-Friendly Interface to AutoDock Vina.

Authors:

Gabriele Macari Daniele Toti Andrea Pasquadibisceglie Fabio Polticelli

Int J Mol Sci 2020 Dec 15;21(24). Epub 2020 Dec 15.

Department of Sciences, Roma Tre University, 00146 Rome, Italy.

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December 2020

Haptoglobin and the related haptoglobin protein: the -terminus makes the difference.

Authors:

Giovanna De Simone Andrea Pasquadibisceglie Fabio Polticelli Alessandra di Masi Paolo Ascenzi

J Biomol Struct Dyn 2020 Oct 24:1-10. Epub 2020 Oct 24.

Laboratorio Interdipartimentale di Microscopia Elettronica, Università Roma Tre, Roma, Italy.

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October 2020

Binding of direct oral anticoagulants to the FA1 site of human serum albumin.

Authors:

Giovanna De Simone Andrea Pasquadibisceglie Alessandra di Masi Valeria Buzzelli Viviana Trezza Gabriele Macari Fabio Polticelli Paolo Ascenzi

J Mol Recognit 2021 Mar 9;34(3):e2877. Epub 2020 Oct 9.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Rome, Italy.

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March 2021

Dynamical Behavior of the Human Ferroportin Homologue from : Insight into the Ligand Recognition Mechanism.

Authors:

Valentina Tortosa Maria Carmela Bonaccorsi di Patti Federico Iacovelli Andrea Pasquadibisceglie Mattia Falconi Giovanni Musci Fabio Polticelli

Int J Mol Sci 2020 Sep 16;21(18). Epub 2020 Sep 16.

Department of Sciences, Roma Tre University, 00146 Rome, Italy.

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September 2020

Computational Methods for the Identification of Molecular Targets of Toxic Food Additives. Butylated Hydroxytoluene as a Case Study.

Authors:

Valentina Tortosa Valentina Pietropaolo Valentina Brandi Gabriele Macari Andrea Pasquadibisceglie Fabio Polticelli

Molecules 2020 May 9;25(9). Epub 2020 May 9.

Department of Sciences, Roma Tre University, 00146 Rome, Italy.

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May 2020

Mycobacterial and Human Nitrobindins: Structure and Function.

Authors:

Giovanna De Simone Alessandra di Masi Gian Marco Vita Fabio Polticelli Alessandra Pesce Marco Nardini Martino Bolognesi Chiara Ciaccio Massimo Coletta Emily Samuela Turilli Mauro Fasano Lorenzo Tognaccini Giulietta Smulevich Stefania Abbruzzetti Cristiano Viappiani Stefano Bruno Paolo Ascenzi

Antioxid Redox Signal 2020 08;33(4):229-246

Dipartimento di Scienze, Università Roma Tre, Roma, Italy.

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August 2020

Contaminations in (meta)genome data: An open issue for the scientific community.

Authors:

Giovanna De Simone Andrea Pasquadibisceglie Roberta Proietto Fabio Polticelli Silvio Aime Huub J M Op den Camp Paolo Ascenzi

IUBMB Life 2020 04 23;72(4):698-705. Epub 2019 Dec 23.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Roma, Italy.

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April 2020

NBS1 interacts with HP1 to ensure genome integrity.

Authors:

Giuseppe Bosso Francesca Cipressa Maria Lina Moroni Rosa Pennisi Jacopo Albanesi Valentina Brandi Simona Cugusi Fioranna Renda Laura Ciapponi Fabio Polticelli Antonio Antoccia Alessandra di Masi Giovanni Cenci

Cell Death Dis 2019 12 13;10(12):951. Epub 2019 Dec 13.

Dipartimento di Biologia e Biotecnologie "C. Darwin", Sapienza Università di Roma, Rome, Italy.

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December 2019

Identification of lipid A deacylase as a novel, highly conserved and protective antigen against enterohemorrhagic Escherichia coli.

Authors:

Maricarmen Rojas-Lopez Manuele Martinelli Valentina Brandi Grégory Jubelin Fabio Polticelli Marco Soriani Mariagrazia Pizza Mickaël Desvaux Roberto Rosini

Sci Rep 2019 11 19;9(1):17014. Epub 2019 Nov 19.

GSK, Via Fiorentina 1, 53100, Siena, Italy.

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November 2019

Ruxolitinib binding to human serum albumin: bioinformatics, biochemical and functional characterization in JAK2V617F cell models.

Authors:

Elisabetta De Marinis Alessia Ceccherelli Alberto Quattrocchi Loris Leboffe Fabio Polticelli Clara Nervi Paolo Ascenzi

Sci Rep 2019 11 8;9(1):16379. Epub 2019 Nov 8.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, I-00146, Roma, Italy.

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November 2019

Selection and Experimental Validation of FDA-Approved Drugs as Anti-quorum Sensing Agents.

Authors:

Marta Mellini Elena Di Muzio Francesca D'Angelo Valerio Baldelli Serena Ferrillo Paolo Visca Livia Leoni Fabio Polticelli Giordano Rampioni

Front Microbiol 2019 10;10:2355. Epub 2019 Oct 10.

Department of Science, University Roma Tre, Rome, Italy.

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October 2019

Bioinformatics analysis of Ras homologue enriched in the striatum, a potential target for Huntington's disease therapy.

Authors:

Miriam Carbo Valentina Brandi Gianmarco Pascarella David Sasah Staid Gianni Colotti Fabio Polticelli Andrea Ilari Veronica Morea

Int J Mol Med 2019 Dec 15;44(6):2223-2233. Epub 2019 Oct 15.

Institute of Molecular Biology and Pathology of The National Research Council of Italy, I‑00185 Rome, Italy.

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December 2019

Uncovering the structure and function of periplasmic proteins by an approach.

Authors:

Silvia Caprari Valentina Brandi Andrea Pasquadibisceglie Fabio Polticelli

J Biomol Struct Dyn 2020 Sep 30;38(15):4508-4520. Epub 2019 Oct 30.

Department of Sciences, Roma Tre University, Rome, Italy.

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September 2020

Computational methods and tools for binding site recognition between proteins and small molecules: from classical geometrical approaches to modern machine learning strategies.

Authors:

Gabriele Macari Daniele Toti Fabio Polticelli

J Comput Aided Mol Des 2019 10 18;33(10):887-903. Epub 2019 Oct 18.

Department of Sciences, Roma Tre University, Viale Guglielmo Marconi 446, 00146, Rome, Italy.

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October 2019

Neonicotinoid trapping by the FA1 site of human serum albumin.

Authors:

Loris Leboffe Alessandra di Masi Viviana Trezza Andrea Pasquadibisceglie Gabriele Macari Fabio Polticelli Paolo Ascenzi

IUBMB Life 2020 04 15;72(4):716-723. Epub 2019 Oct 15.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Rome, Italy.

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April 2020

Cytochrome c: An extreme multifunctional protein with a key role in cell fate.

Authors:

Roberto Santucci Federica Sinibaldi Paola Cozza Fabio Polticelli Laura Fiorucci

Int J Biol Macromol 2019 Sep 25;136:1237-1246. Epub 2019 Jun 25.

Department of Clinical Sciences and Translational Medicine, University of Rome 'Tor Vergata', 00133 Rome, Italy.

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September 2019

The Four FAD-Dependent Histone Demethylases of Arabidopsis Are Differently Involved in the Control of Flowering Time.

Authors:

Damiano Martignago Benedetta Bernardini Fabio Polticelli Daniele Salvi Alessandra Cona Riccardo Angelini Paraskevi Tavladoraki

Front Plant Sci 2019 4;10:669. Epub 2019 Jun 4.

Department of Science, Roma Tre University, Rome, Italy.

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June 2019

Fragment-Based Ligand-Protein Contact Statistics: Application to Docking Simulations.

Authors:

Gabriele Macari Daniele Toti Carlo Del Moro Fabio Polticelli

Int J Mol Sci 2019 May 21;20(10). Epub 2019 May 21.

Department of Sciences, Roma Tre University, 00146 Rome, Italy.

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May 2019

Oxygen dissociation from ferrous oxygenated human hemoglobin:haptoglobin complexes confirms that in the R-state α and β chains are functionally heterogeneous.

Authors:

Paolo Ascenzi Fabio Polticelli Massimiliano Coletta

Sci Rep 2019 05 1;9(1):6780. Epub 2019 May 1.

Department of Clinical Sciences and Translational Medicine, University of Roma "Tor Vergata", Via Montpellier 1, I-00133, Roma, Italy.

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May 2019

Structural Basis of Drug Recognition by Human Serum Albumin.

Authors:

Loris Leboffe Alessandra di Masi Fabio Polticelli Viviana Trezza Paolo Ascenzi

Curr Med Chem 2020 ;27(30):4907-4931

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Via della Vasca Navale 79, I- 00146 Roma, Italy.

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September 2020

Exploring the activity of polyamine analogues on polyamine and spermine oxidase: methoctramine, a potent and selective inhibitor of polyamine oxidase.

Authors:

Maria Luisa Di Paolo Manuela Cervelli Paolo Mariottini Alessia Leonetti Fabio Polticelli Michela Rosini Andrea Milelli Filippo Basagni Rina Venerando Enzo Agostinelli Anna Minarini

J Enzyme Inhib Med Chem 2019 Dec;34(1):740-752

d Department of Pharmacy and Biotechnology , Alma Mater Studiorum-University of Bologna , Bologna , Italy.

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December 2019

No lanthanides-based catalysis in eukaryotes.

Authors:

Giovanna De Simone Fabio Polticelli Silvio Aime Paolo Ascenzi

IUBMB Life 2019 03 13;71(3):398-399. Epub 2018 Dec 13.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Roma, Italy.

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March 2019

Human nitrobindin: the first example of an all-β-barrel ferric heme-protein that catalyzes peroxynitrite detoxification.

Authors:

Giovanna De Simone Alessandra di Masi Fabio Polticelli Paolo Ascenzi

FEBS Open Bio 2018 Dec 9;8(12):2002-2010. Epub 2018 Nov 9.

Interdepartmental Laboratory for Electron Microscopy Roma Tre University Italy.

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December 2018

Lanthanides-based catalysis in eukaryotes.

Authors:

Giovanna De Simone Fabio Polticelli Silvio Aime Paolo Ascenzi

IUBMB Life 2018 11 25;70(11):1067-1075. Epub 2018 Sep 25.

Interdepartmental Laboratory for Electron Microscopy, Roma Tre University, Roma, Italy.

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November 2018

Identification of FDA-Approved Drugs as Antivirulence Agents Targeting the Quorum-Sensing System of Pseudomonas aeruginosa.

Authors:

Francesca D'Angelo Valerio Baldelli Nigel Halliday Paolo Pantalone Fabio Polticelli Ersilia Fiscarelli Paul Williams Paolo Visca Livia Leoni Giordano Rampioni

Antimicrob Agents Chemother 2018 11 24;62(11). Epub 2018 Oct 24.

Department of Science, University Roma Tre, Rome, Italy

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November 2018

Human Serum Albumin Is an Essential Component of the Host Defense Mechanism Against Clostridium difficile Intoxication.

J Infect Dis 2018 09;218(9):1424-1435

2nd Infectious Diseases Division, National Institute for Infectious Diseases "L. Spallanzani", Roma, Italy.

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September 2018

Fipronil recognition by the FA1 site of human serum albumin.

Authors:

Paolo Ascenzi Loris Leboffe Daniele Toti Fabio Polticelli Viviana Trezza

J Mol Recognit 2018 08 15;31(8):e2713. Epub 2018 Apr 15.

Department of Sciences, Roma Tre University, I-00146, Rome, Italy.

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August 2018

Reductive nitrosylation of ferric human hemoglobin bound to human haptoglobin 1-1 and 2-2.

Authors:

Paolo Ascenzi Giovanna De Simone Fabio Polticelli Magda Gioia Massimo Coletta

J Biol Inorg Chem 2018 05 31;23(3):437-445. Epub 2018 Mar 31.

Department of Clinical Sciences and Translational Medicine, University of Roma "Tor Vergata", Via Montpellier 1, 00133, Rome, Italy.

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May 2018

The ferroportin-ceruloplasmin system and the mammalian iron homeostasis machine: regulatory pathways and the role of lactoferrin.

Authors:

Maria Carmela Bonaccorsi di Patti Antimo Cutone Fabio Polticelli Luigi Rosa Maria Stefania Lepanto Piera Valenti Giovanni Musci

Biometals 2018 06 16;31(3):399-414. Epub 2018 Feb 16.

Department of Biosciences and Territory, University of Molise, C.da Fonte Lappone, 86090, Pesche, IS, Italy.

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June 2018

Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a β-Helical Passenger.

Authors:

Maricarmen Rojas-Lopez Mohamed A Zorgani Lawrence A Kelley Xavier Bailly Andrey V Kajava Ian R Henderson Fabio Polticelli Mariagrazia Pizza Roberto Rosini Mickaël Desvaux

Front Microbiol 2017 5;8:2607. Epub 2018 Jan 5.

Université Clermont Auvergne, INRA, UMR454 MEDiS, Clermont-Ferrand, France.

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January 2018

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