Eva Freyhult

Eva Freyhult

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Eva Freyhult

Eva Freyhult

Publications by authors named "Eva Freyhult"

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32Publications

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Stress-related genetic polymorphisms in association with peripartum depression symptoms and stress hormones: A longitudinal population-based study.

Psychoneuroendocrinology 2019 May 7;103:296-305. Epub 2019 Feb 7.

Department of Neuroscience, Science for Life Laboratory, Uppsala University, Uppsala, Sweden. Electronic address:

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http://dx.doi.org/10.1016/j.psyneuen.2019.02.002DOI Listing
May 2019

Reduction in White Blood Cell, Neutrophil, and Red Blood Cell Counts Related to Sex, HLA, and Islet Autoantibodies in Swedish TEDDY Children at Increased Risk for Type 1 Diabetes.

Diabetes 2018 11 13;67(11):2329-2336. Epub 2018 Aug 13.

Department of Clinical Sciences, Lund University/Clinical Research Centre, Skåne University Hospital, Malmö, Sweden.

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http://dx.doi.org/10.2337/db18-0355DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6198343PMC
November 2018

Plasma Protein Profiling Reveal Osteoprotegerin as a Marker of Prognostic Impact for Colorectal Cancer.

Transl Oncol 2018 Aug 4;11(4):1034-1043. Epub 2018 Jul 4.

Department of Immunology, Genetics and Pathology, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.

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http://dx.doi.org/10.1016/j.tranon.2018.05.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6037900PMC
August 2018

HLA class I is most tightly linked to levels of tapasin compared with other antigen-processing proteins in glioblastoma.

Br J Cancer 2015 Sep 27;113(6):952-62. Epub 2015 Aug 27.

Immunology Section, Department of Experimental Medical Science, Lund University, SE-221 84 Lund, Sweden.

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http://dx.doi.org/10.1038/bjc.2015.297DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4578088PMC
September 2015

Transglutaminase 4 as a prostate autoantigen in male subfertility.

Sci Transl Med 2015 Jun;7(292):292ra101

Department of Medicine (Solna), Karolinska University Hospital, Karolinska Institutet, Stockholm SE 171 76, Sweden. Department of Medical Sciences, Science for Life Laboratory, Uppsala University, Uppsala SE 751 85, Sweden.

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http://dx.doi.org/10.1126/scitranslmed.aaa9186DOI Listing
June 2015

FGF2 as a potential prognostic biomarker for proneural glioma patients.

Acta Oncol 2015 Mar 29;54(3):385-94. Epub 2014 Sep 29.

Department of Radiology, Oncology and Radiation Sciences, Section of Oncology, Rudbeck Laboratory , Uppsala , Sweden.

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http://dx.doi.org/10.3109/0284186X.2014.951492DOI Listing
March 2015

A Machine Learning Approach to Explain Drug Selectivity to Soluble and Membrane Protein Targets.

Mol Inform 2015 01 8;34(1):44-52. Epub 2015 Jan 8.

Division of Cancer Pharmacology and Computational Medicine, Department of Medical Sciences, Uppsala University, Uppsala Academic Hospital, SE-751 85 Uppsala, Sweden.

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http://dx.doi.org/10.1002/minf.201400121DOI Listing
January 2015

Classification of microarrays; synergistic effects between normalization, gene selection and machine learning.

BMC Bioinformatics 2011 Oct 7;12:390. Epub 2011 Oct 7.

Umeå Plant Science Center, Department of Plant Physiology, Umeå University, 901 87 Umeå, Sweden.

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http://dx.doi.org/10.1186/1471-2105-12-390DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3229535PMC
October 2011

Challenges in microarray class discovery: a comprehensive examination of normalization, gene selection and clustering.

BMC Bioinformatics 2010 Oct 11;11:503. Epub 2010 Oct 11.

Department of Clinical Microbiology, Division of Clinical Bacteriology, Umeå University, Umeå, Sweden.

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http://dx.doi.org/10.1186/1471-2105-11-503DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3098084PMC
October 2010

Fisher: a program for the detection of H/ACA snoRNAs using MFE secondary structure prediction and comparative genomics - assessment and update.

BMC Res Notes 2008 Jul 21;1:49. Epub 2008 Jul 21.

Linnaeus Centre for Bioinformatics, Uppsala University, Box 598, S-751, 24 Uppsala, Sweden; Department of Clinical Microbiology, Clinical Bacteriology, Umeå University, 901 85 Umeå, Sweden.

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http://dx.doi.org/10.1186/1756-0500-1-49DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2551606PMC
July 2008

Evolution of genes and genomes on the Drosophila phylogeny.

Authors:
Andrew G Clark Michael B Eisen Douglas R Smith Casey M Bergman Brian Oliver Therese A Markow Thomas C Kaufman Manolis Kellis William Gelbart Venky N Iyer Daniel A Pollard Timothy B Sackton Amanda M Larracuente Nadia D Singh Jose P Abad Dawn N Abt Boris Adryan Montserrat Aguade Hiroshi Akashi Wyatt W Anderson Charles F Aquadro David H Ardell Roman Arguello Carlo G Artieri Daniel A Barbash Daniel Barker Paolo Barsanti Phil Batterham Serafim Batzoglou Dave Begun Arjun Bhutkar Enrico Blanco Stephanie A Bosak Robert K Bradley Adrianne D Brand Michael R Brent Angela N Brooks Randall H Brown Roger K Butlin Corrado Caggese Brian R Calvi A Bernardo de Carvalho Anat Caspi Sergio Castrezana Susan E Celniker Jean L Chang Charles Chapple Sourav Chatterji Asif Chinwalla Alberto Civetta Sandra W Clifton Josep M Comeron James C Costello Jerry A Coyne Jennifer Daub Robert G David Arthur L Delcher Kim Delehaunty Chuong B Do Heather Ebling Kevin Edwards Thomas Eickbush Jay D Evans Alan Filipski Sven Findeiss Eva Freyhult Lucinda Fulton Robert Fulton Ana C L Garcia Anastasia Gardiner David A Garfield Barry E Garvin Greg Gibson Don Gilbert Sante Gnerre Jennifer Godfrey Robert Good Valer Gotea Brenton Gravely Anthony J Greenberg Sam Griffiths-Jones Samuel Gross Roderic Guigo Erik A Gustafson Wilfried Haerty Matthew W Hahn Daniel L Halligan Aaron L Halpern Gillian M Halter Mira V Han Andreas Heger LaDeana Hillier Angie S Hinrichs Ian Holmes Roger A Hoskins Melissa J Hubisz Dan Hultmark Melanie A Huntley David B Jaffe Santosh Jagadeeshan William R Jeck Justin Johnson Corbin D Jones William C Jordan Gary H Karpen Eiko Kataoka Peter D Keightley Pouya Kheradpour Ewen F Kirkness Leonardo B Koerich Karsten Kristiansen Dave Kudrna Rob J Kulathinal Sudhir Kumar Roberta Kwok Eric Lander Charles H Langley Richard Lapoint Brian P Lazzaro So-Jeong Lee Lisa Levesque Ruiqiang Li Chiao-Feng Lin Michael F Lin Kerstin Lindblad-Toh Ana Llopart Manyuan Long Lloyd Low Elena Lozovsky Jian Lu Meizhong Luo Carlos A Machado Wojciech Makalowski Mar Marzo Muneo Matsuda Luciano Matzkin Bryant McAllister Carolyn S McBride Brendan McKernan Kevin McKernan Maria Mendez-Lago Patrick Minx Michael U Mollenhauer Kristi Montooth Stephen M Mount Xu Mu Eugene Myers Barbara Negre Stuart Newfeld Rasmus Nielsen Mohamed A F Noor Patrick O'Grady Lior Pachter Montserrat Papaceit Matthew J Parisi Michael Parisi Leopold Parts Jakob S Pedersen Graziano Pesole Adam M Phillippy Chris P Ponting Mihai Pop Damiano Porcelli Jeffrey R Powell Sonja Prohaska Kim Pruitt Marta Puig Hadi Quesneville Kristipati Ravi Ram David Rand Matthew D Rasmussen Laura K Reed Robert Reenan Amy Reily Karin A Remington Tania T Rieger Michael G Ritchie Charles Robin Yu-Hui Rogers Claudia Rohde Julio Rozas Marc J Rubenfield Alfredo Ruiz Susan Russo Steven L Salzberg Alejandro Sanchez-Gracia David J Saranga Hajime Sato Stephen W Schaeffer Michael C Schatz Todd Schlenke Russell Schwartz Carmen Segarra Rama S Singh Laura Sirot Marina Sirota Nicholas B Sisneros Chris D Smith Temple F Smith John Spieth Deborah E Stage Alexander Stark Wolfgang Stephan Robert L Strausberg Sebastian Strempel David Sturgill Granger Sutton Granger G Sutton Wei Tao Sarah Teichmann Yoshiko N Tobari Yoshihiko Tomimura Jason M Tsolas Vera L S Valente Eli Venter J Craig Venter Saverio Vicario Filipe G Vieira Albert J Vilella Alfredo Villasante Brian Walenz Jun Wang Marvin Wasserman Thomas Watts Derek Wilson Richard K Wilson Rod A Wing Mariana F Wolfner Alex Wong Gane Ka-Shu Wong Chung-I Wu Gabriel Wu Daisuke Yamamoto Hsiao-Pei Yang Shiaw-Pyng Yang James A Yorke Kiyohito Yoshida Evgeny Zdobnov Peili Zhang Yu Zhang Aleksey V Zimin Jennifer Baldwin Amr Abdouelleil Jamal Abdulkadir Adal Abebe Brikti Abera Justin Abreu St Christophe Acer Lynne Aftuck Allen Alexander Peter An Erica Anderson Scott Anderson Harindra Arachi Marc Azer Pasang Bachantsang Andrew Barry Tashi Bayul Aaron Berlin Daniel Bessette Toby Bloom Jason Blye Leonid Boguslavskiy Claude Bonnet Boris Boukhgalter Imane Bourzgui Adam Brown Patrick Cahill Sheridon Channer Yama Cheshatsang Lisa Chuda Mieke Citroen Alville Collymore Patrick Cooke Maura Costello Katie D'Aco Riza Daza Georgius De Haan Stuart DeGray Christina DeMaso Norbu Dhargay Kimberly Dooley Erin Dooley Missole Doricent Passang Dorje Kunsang Dorjee Alan Dupes Richard Elong Jill Falk Abderrahim Farina Susan Faro Diallo Ferguson Sheila Fisher Chelsea D Foley Alicia Franke Dennis Friedrich Loryn Gadbois Gary Gearin Christina R Gearin Georgia Giannoukos Tina Goode Joseph Graham Edward Grandbois Sharleen Grewal Kunsang Gyaltsen Nabil Hafez Birhane Hagos Jennifer Hall Charlotte Henson Andrew Hollinger Tracey Honan Monika D Huard Leanne Hughes Brian Hurhula M Erii Husby Asha Kamat Ben Kanga Seva Kashin Dmitry Khazanovich Peter Kisner Krista Lance Marcia Lara William Lee Niall Lennon Frances Letendre Rosie LeVine Alex Lipovsky Xiaohong Liu Jinlei Liu Shangtao Liu Tashi Lokyitsang Yeshi Lokyitsang Rakela Lubonja Annie Lui Pen MacDonald Vasilia Magnisalis Kebede Maru Charles Matthews William McCusker Susan McDonough Teena Mehta James Meldrim Louis Meneus Oana Mihai Atanas Mihalev Tanya Mihova Rachel Mittelman Valentine Mlenga Anna Montmayeur Leonidas Mulrain Adam Navidi Jerome Naylor Tamrat Negash Thu Nguyen Nga Nguyen Robert Nicol Choe Norbu Nyima Norbu Nathaniel Novod Barry O'Neill Sahal Osman Eva Markiewicz Otero L Oyono Christopher Patti Pema Phunkhang Fritz Pierre Margaret Priest Sujaa Raghuraman Filip Rege Rebecca Reyes Cecil Rise Peter Rogov Keenan Ross Elizabeth Ryan Sampath Settipalli Terry Shea Ngawang Sherpa Lu Shi Diana Shih Todd Sparrow Jessica Spaulding John Stalker Nicole Stange-Thomann Sharon Stavropoulos Catherine Stone Christopher Strader Senait Tesfaye Talene Thomson Yama Thoulutsang Dawa Thoulutsang Kerri Topham Ira Topping Tsamla Tsamla Helen Vassiliev Andy Vo Tsering Wangchuk Tsering Wangdi Michael Weiand Jane Wilkinson Adam Wilson Shailendra Yadav Geneva Young Qing Yu Lisa Zembek Danni Zhong Andrew Zimmer Zac Zwirko David B Jaffe Pablo Alvarez Will Brockman Jonathan Butler CheeWhye Chin Sante Gnerre Manfred Grabherr Michael Kleber Evan Mauceli Iain MacCallum

Nature 2007 Nov;450(7167):203-18

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.

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http://dx.doi.org/10.1038/nature06341DOI Listing
November 2007

New computational methods reveal tRNA identity element divergence between Proteobacteria and Cyanobacteria.

Biochimie 2007 Oct 31;89(10):1276-88. Epub 2007 Jul 31.

The Linnaeus Centre for Bioinformatics, Uppsala University, Box 598, 751 24 Uppsala, Sweden.

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http://dx.doi.org/10.1016/j.biochi.2007.07.013DOI Listing
October 2007

Boltzmann probability of RNA structural neighbors and riboswitch detection.

Bioinformatics 2007 Aug 14;23(16):2054-62. Epub 2007 Jun 14.

Linnaeus Centre for Bioinformatics, Uppsala University, 75124 Uppsala, Sweden.

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http://dx.doi.org/10.1093/bioinformatics/btm314DOI Listing
August 2007

RNAbor: a web server for RNA structural neighbors.

Nucleic Acids Res 2007 Jul 25;35(Web Server issue):W305-9. Epub 2007 May 25.

Linnaeus Centre for Bioinformatics, Uppsala University, 75124 Uppsala, Sweden.

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http://dx.doi.org/10.1093/nar/gkm255DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933207PMC
July 2007

Exploring genomic dark matter: a critical assessment of the performance of homology search methods on noncoding RNA.

Genome Res 2007 Jan 6;17(1):117-25. Epub 2006 Dec 6.

The Linnaeus Centre for Bioinformatics, Uppsala University, 75124 Uppsala, Sweden.

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http://dx.doi.org/10.1101/gr.5890907DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1716261PMC
January 2007

Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos.

Nucleic Acids Res 2006 9;34(3):905-16. Epub 2006 Feb 9.

Linnaeus Centre for Bioinformatics, Uppsala University Uppsala, Sweden.

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http://dx.doi.org/10.1093/nar/gkj478DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1363773PMC
March 2006

Predicting RNA structure using mutual information.

Appl Bioinformatics 2005 ;4(1):53-9

The Linnaeus Centre for Bioinformatics, Uppsala University, Uppsala, Sweden.

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December 2005

A comparison of RNA folding measures.

BMC Bioinformatics 2005 Oct 3;6:241. Epub 2005 Oct 3.

The Linnaeus Centre for Bioinformatics, Uppsala University, Uppsala, Sweden.

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http://dx.doi.org/10.1186/1471-2105-6-241DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1274297PMC
October 2005

Unbiased descriptor and parameter selection confirms the potential of proteochemometric modelling.

BMC Bioinformatics 2005 Mar 10;6:50. Epub 2005 Mar 10.

The Linnaeus Centre for Bioinformatics, Uppsala University, Box 598, S-751 24 Uppsala, Sweden.

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http://dx.doi.org/10.1186/1471-2105-6-50DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC555743PMC
March 2005

Structural modeling extends QSAR analysis of antibody-lysozyme interactions to 3D-QSAR.

Biophys J 2003 Apr;84(4):2264-72

The Linnaeus Centre for Bioinformatics, Uppsala University, Sweden.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1302793PMC
http://dx.doi.org/10.1016/S0006-3495(03)75032-2DOI Listing
April 2003