Publications by authors named "Ermanno Rizzi"

45Publications

Exploring the under-investigated "microbial dark matter" of drinking water treatment plants.

Sci Rep 2017 03 14;7:44350. Epub 2017 Mar 14.

University of Milan-Bicocca, ZooPlantLab, Biotechnology and Biosciences Department, Piazza della Scienza 2, 20126, Milan, Italy.

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http://dx.doi.org/10.1038/srep44350DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5349567PMC
March 2017

ICESpy009, a Conjugative Genetic Element Carrying mef(E) in Streptococcus pyogenes.

Antimicrob Agents Chemother 2016 07 20;60(7):3906-12. Epub 2016 Jun 20.

Department of Infectious, Parasitic and Immune-Mediated Diseases, Istituto Superiore di Sanità, Rome, Italy.

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http://dx.doi.org/10.1128/AAC.03082-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4914681PMC
July 2016

Dynamic Transcriptional and Epigenetic Regulation of Human Epidermal Keratinocyte Differentiation.

Stem Cell Reports 2016 Apr 31;6(4):618-632. Epub 2016 Mar 31.

Department of Life Sciences, University of Modena and Reggio Emilia, 41125 Modena, Italy; Genethon, 1bis rue de l'Internationale, 91002 Evry, France. Electronic address:

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http://dx.doi.org/10.1016/j.stemcr.2016.03.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4834057PMC
April 2016

A Unique Tryptophan C-Prenyltransferase from the Kawaguchipeptin Biosynthetic Pathway.

Angew Chem Int Ed Engl 2016 Mar 5;55(11):3596-9. Epub 2016 Feb 5.

Microbiology and Biotechnology Division, Department of Food and Environmental Sciences, P.O.Box 56, Viikki Biocenter, Viikinkaari 9, 00014, University of Helsinki, Finland.

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http://dx.doi.org/10.1002/anie.201509920DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5108402PMC
March 2016

Antifungal activity improved by coproduction of cyclodextrins and anabaenolysins in Cyanobacteria.

Proc Natl Acad Sci U S A 2015 Nov 16;112(44):13669-74. Epub 2015 Oct 16.

Department of Food and Environmental Sciences, University of Helsinki, FI-00014, Helsinki, Finland;

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http://dx.doi.org/10.1073/pnas.1510432112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4640768PMC
November 2015

The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs.

BMC Genomics 2015 Feb 19;16:100. Epub 2015 Feb 19.

Department of Life Sciences, South Kensington Campus, Imperial College London, London, SW7 2AZ, United Kingdom.

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http://dx.doi.org/10.1186/s12864-015-1257-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4345017PMC
February 2015

The pyrosequencing protocol for bacterial genomes.

Authors:
Ermanno Rizzi

Methods Mol Biol 2015 ;1231:49-75

National Research Council (CNR), Institute for Biomedical Technologies (ITB), Via F.lli Cervi 93, 20090, Segrate, MI, Italy,

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http://dx.doi.org/10.1007/978-1-4939-1720-4_4DOI Listing
June 2015

Enly: Improving Draft Genomes through Reads Recycling.

J Genomics 2014 5;2:89-93. Epub 2014 Apr 5.

1. Dept. of Evolutionary Biology, Via Madonna del Piano 6, 50143 Sesto Fiorentino,Florence, Italy;

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http://dx.doi.org/10.7150/jgen.7298DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4091449PMC
July 2014

Positioning the red deer (Cervus elaphus) hunted by the Tyrolean Iceman into a mitochondrial DNA phylogeny.

PLoS One 2014 2;9(7):e100136. Epub 2014 Jul 2.

Laboratory of Molecular Archaeo-Anthropology/ancient DNA, School of Biosciences and Veterinary Medicine, University of Camerino, Camerino, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0100136PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4079593PMC
February 2015

The genome sequence of the hydrocarbon-degrading Acinetobacter venetianus VE-C3.

Res Microbiol 2013 Jun 23;164(5):439-49. Epub 2013 Mar 23.

Laboratory of Microbial and Molecular Evolution, Department of Biology, University of Florence, Via Madonna del Piano 6, Sesto Fiorentino (FI), Italy.

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http://dx.doi.org/10.1016/j.resmic.2013.03.003DOI Listing
June 2013

Nup153 and Nup98 bind the HIV-1 core and contribute to the early steps of HIV-1 replication.

Virology 2013 May 21;440(1):8-18. Epub 2013 Mar 21.

Molecular Virology and Vaccinology unit, CNRS URA 3015, Department of Virology, Institut Pasteur, 25-28 rue du Dr. Roux, 75015 Paris, France.

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http://dx.doi.org/10.1016/j.virol.2013.02.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3860269PMC
May 2013

Ancient DNA studies: new perspectives on old samples.

Genet Sel Evol 2012 Jul 6;44:21. Epub 2012 Jul 6.

Institute for Biomedical Technologies, National Research Council, Via F.lli Cervi 93, Segrate, Milan 20090, Italy.

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http://dx.doi.org/10.1186/1297-9686-44-21DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3390907PMC
July 2012

Phylogenetic position of a copper age sheep (Ovis aries) mitochondrial DNA.

PLoS One 2012 23;7(3):e33792. Epub 2012 Mar 23.

Laboratorio di Archeo-Antropologia molecolare/DNA Antico, Scuola di Bioscienze e Biotecnologie, University of Camerino, Camerino, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0033792PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3311544PMC
August 2012

Anatoxin-a synthetase gene cluster of the cyanobacterium Anabaena sp. strain 37 and molecular methods to detect potential producers.

Appl Environ Microbiol 2011 Oct 26;77(20):7271-8. Epub 2011 Aug 26.

Department of Food and Environmental Microbiology, Division of Microbiology, P.O. Box 56 (Viikinkaari 9), FI-00014 University of Helsinki, Finland.

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http://aem.asm.org/lookup/doi/10.1128/AEM.06022-11
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http://dx.doi.org/10.1128/AEM.06022-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3194866PMC
October 2011

Characterization of nucleotide misincorporation patterns in the iceman's mitochondrial DNA.

PLoS One 2010 Jan 8;5(1):e8629. Epub 2010 Jan 8.

Laboratorio di Archeo-Antropologia molecolare/DNA Antico, Dipartimento di Biologia Molecolare, Cellulare e Animale, University of Camerino, Camerino, Italy.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0008629PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2799664PMC
January 2010

High-throughput sequencing allows the identification of binding molecules isolated from DNA-encoded chemical libraries.

Proc Natl Acad Sci U S A 2008 Nov 10;105(46):17670-5. Epub 2008 Nov 10.

Institut für Pharmazeutische Wissenschaften Departement für Chemie und Angewandte Biowissenschaften, Eidgenössische Technische Hochschule, Wolfgang-Pauli-Strasse 10, CH-8093 Zurich, Switzerland.

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http://dx.doi.org/10.1073/pnas.0805130105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2584757PMC
November 2008

Complete mitochondrial genome sequence of the Tyrolean Iceman.

Curr Biol 2008 Nov 30;18(21):1687-93. Epub 2008 Oct 30.

Laboratorio di Archeo-Antropologia Molecolare/DNA Antico, Dipartimento di Biologia Molecolare, Cellulare e Animale, University of Camerino, 62032 Camerino, Italy.

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http://dx.doi.org/10.1016/j.cub.2008.09.028DOI Listing
November 2008

Non-random retention of protein-coding overlapping genes in Metazoa.

BMC Genomics 2008 Apr 16;9:174. Epub 2008 Apr 16.

1Department of Biology and Genetics for Medical Sciences, University of Milan, 20133 Milan, Italy.

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http://dx.doi.org/10.1186/1471-2164-9-174DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2330155PMC
April 2008

Identification of hepatotoxin-producing cyanobacteria by DNA-chip.

Environ Microbiol 2008 Mar 7;10(3):653-64. Epub 2008 Jan 7.

Department of Applied Chemistry and Microbiology, University of Helsinki, Finland.

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http://dx.doi.org/10.1111/j.1462-2920.2007.01488.xDOI Listing
March 2008

Data handling strategies for high throughput pyrosequencers.

BMC Bioinformatics 2007 Mar 8;8 Suppl 1:S22. Epub 2007 Mar 8.

Institute for Biomedical Technologies-National Research Council, via Fratelli Cervi 93, 20090 Segrate, MI, Italy.

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http://dx.doi.org/10.1186/1471-2105-8-S1-S22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1885852PMC
March 2007

Application of the Taguchi method to the analysis of the deposition step in microarray production.

IEEE Trans Nanobioscience 2006 Sep;5(3):164-72

Institute of Biomedical Technologies of the National Research Council, 20090 Milan, Italy.

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http://dx.doi.org/10.1109/tnb.2006.880851DOI Listing
September 2006

Polymorphism analysis within the HLA-A locus by universal oligonucleotide array.

Hum Mutat 2004 Nov;24(5):428-34

Dipartimento di Scienze e Tecnologie Biomediche and CISI, Università degli Studi di Milano, Segrate, Italy.

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http://dx.doi.org/10.1002/humu.20098DOI Listing
November 2004

Detection and quantitation of genetically modified maize (Bt-176 transgenic maize) by applying ligation detection reaction and universal array technology.

J Agric Food Chem 2004 Mar;52(5):1049-54

Consiglio Nazionale delle Ricerche, Istituto di Tecnologie Biomediche and Dipartimento di Scienze e Tecnologie Biomediche, Università degli Studi di Milano, LITA, Via F.lli Cervi, 93 20090 Segrate, Milan, Italy.

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http://dx.doi.org/10.1021/jf034871eDOI Listing
March 2004

Apolipoprotein E and transferrin genotyping by ligation detection reaction and universal array.

Clin Chem 2003 Sep;49(9):1537-40

Istituto di Tecnologie Biomediche, Consiglio Nazionale delle Ricerche, via Fratelli Cervi 93, 20090 Segrate (MI), Italy.

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http://dx.doi.org/10.1373/49.9.1537DOI Listing
September 2003