Publications by authors named "Elizabeth P Murchison"

41Publications

Recurrent horizontal transfer identifies mitochondrial positive selection in a transmissible cancer.

Authors:
Andrea Strakova Thomas J Nicholls Adrian Baez-Ortega Máire Ní Leathlobhair Alexander T Sampson Katherine Hughes Isobelle A G Bolton Kevin Gori Jinhong Wang Ilona Airikkala-Otter Janice L Allen Karen M Allum Clara L Arnold Leontine Bansse-Issa Thinlay N Bhutia Jocelyn L Bisson Kelli Blank Cristóbal Briceño Artemio Castillo Domracheva Anne M Corrigan Hugh R Cran Jane T Crawford Stephen M Cutter Eric Davis Karina F de Castro Andrigo B De Nardi Anna P de Vos Laura Delgadillo Keenan Edward M Donelan Adela R Espinoza Huerta Ibikunle A Faramade Mohammed Fazil Eleni Fotopoulou Skye N Fruean Fanny Gallardo-Arrieta Olga Glebova Pagona G Gouletsou Rodrigo F Häfelin Manrique Joaquim J G P Henriques Rodrigo S Horta Natalia Ignatenko Yaghouba Kane Cathy King Debbie Koenig Ada Krupa Steven J Kruzeniski Marta Lanza-Perea Mihran Lazyan Adriana M Lopez Quintana Thibault Losfelt Gabriele Marino Simón Martínez Castañeda Mayra F Martínez-López Bedan M Masuruli Michael Meyer Edward J Migneco Berna Nakanwagi Karter B Neal Winifred Neunzig Sally J Nixon Antonio Ortega-Pacheco Francisco Pedraza-Ordoñez Maria C Peleteiro Katherine Polak Ruth J Pye Juan C Ramirez-Ante John F Reece Jose Rojas Gutierrez Haleema Sadia Sheila K Schmeling Olga Shamanova Alan G Sherlock Audrey E Steenland-Smit Alla Svitich Lester J Tapia Martínez Ismail Thoya Ngoka Cristian G Torres Elizabeth M Tudor Mirjam G van der Wel Bogdan A Vițălaru Sevil A Vural Oliver Walkinton Alvaro S Wehrle-Martinez Sophie A E Widdowson Irina Zvarich Patrick F Chinnery Maria Falkenberg Claes M Gustafsson Elizabeth P Murchison

Nat Commun 2020 06 16;11(1):3059. Epub 2020 Jun 16.

Transmissible Cancer Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1038/s41467-020-16765-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7297733PMC
June 2020

Somatic evolution and global expansion of an ancient transmissible cancer lineage.

Science 2019 08;365(6452)

Transmissible Cancer Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

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http://dx.doi.org/10.1126/science.aau9923DOI Listing
August 2019

scanPAV: a pipeline for extracting presence-absence variations in genome pairs.

Bioinformatics 2018 09;34(17):3022-3024

The Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton.

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http://dx.doi.org/10.1093/bioinformatics/bty189DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6129304PMC
September 2018

No evidence for clonal transmission of urogenital carcinoma in California sea lions ( ).

Wellcome Open Res 2017 22;2:46. Epub 2017 Jun 22.

Transmissible Cancer Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES, UK.

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http://dx.doi.org/10.12688/wellcomeopenres.11483.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5527528PMC
June 2017

Rapid evolutionary response to a transmissible cancer in Tasmanian devils.

Nat Commun 2016 08 30;7:12684. Epub 2016 Aug 30.

School of Biological Sciences, Washington State University, Pullman, Washington 99164-4236, USA.

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http://dx.doi.org/10.1038/ncomms12684DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5013612PMC
August 2016

Cancer in the Wilderness.

Cell 2016 Jul;166(2):264-268

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http://dx.doi.org/10.1016/j.cell.2016.06.050DOI Listing
July 2016

Cancer: Transmissible tumours under the sea.

Nature 2016 06 22;534(7609):628-9. Epub 2016 Jun 22.

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http://dx.doi.org/10.1038/nature18455DOI Listing
June 2016

Mitochondrial genetic diversity, selection and recombination in a canine transmissible cancer.

Elife 2016 05 17;5. Epub 2016 May 17.

Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.

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http://dx.doi.org/10.7554/eLife.14552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4869914PMC
May 2016

Transmissible cancer in Tasmanian devils: localized lineage replacement and host population response.

Proc Biol Sci 2015 Sep;282(1814)

School of Biological Sciences, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia.

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http://dx.doi.org/10.1098/rspb.2015.1468DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4571705PMC
September 2015

The cancer which survived: insights from the genome of an 11000 year-old cancer.

Curr Opin Genet Dev 2015 Feb 11;30:49-55. Epub 2015 Apr 11.

Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge CB3 0ES, UK. Electronic address:

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http://dx.doi.org/10.1016/j.gde.2015.03.005DOI Listing
February 2015

Enhancer evolution across 20 mammalian species.

Cell 2015 Jan;160(3):554-66

University of Cambridge, Cancer Research UK Cambridge Institute, Robinson Way, Cambridge, CB2 0RE, UK; Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2015.01.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4313353PMC
January 2015

Expansion of CORE-SINEs in the genome of the Tasmanian devil.

BMC Genomics 2012 May 6;13:172. Epub 2012 May 6.

LOEWE-Biodiversity and Climate Research Center, BiK-F, Senckenberganlage 25, Frankfurt am Main D-60325, Germany.

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http://dx.doi.org/10.1186/1471-2164-13-172DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3403934PMC
May 2012

Sequencing skippy: the genome sequence of an Australian kangaroo, Macropus eugenii.

Genome Biol 2011 Aug 19;12(8):123. Epub 2011 Aug 19.

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

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http://dx.doi.org/10.1186/gb-2011-12-8-123DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245606PMC
August 2011

Ordered progression of stage-specific miRNA profiles in the mouse B2 B-cell lineage.

Blood 2011 May 14;117(20):5340-9. Epub 2011 Mar 14.

Department of Immunology, Hartwell Center for Bioinformatics and Biotechnology, St Jude Children’s Research Hospital, Memphis, TN 38105, USA.

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http://dx.doi.org/10.1182/blood-2010-10-316034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3109709PMC
May 2011

Genome analysis of the platypus reveals unique signatures of evolution.

Authors:
Wesley C Warren LaDeana W Hillier Jennifer A Marshall Graves Ewan Birney Chris P Ponting Frank Grützner Katherine Belov Webb Miller Laura Clarke Asif T Chinwalla Shiaw-Pyng Yang Andreas Heger Devin P Locke Pat Miethke Paul D Waters Frédéric Veyrunes Lucinda Fulton Bob Fulton Tina Graves John Wallis Xose S Puente Carlos López-Otín Gonzalo R Ordóñez Evan E Eichler Lin Chen Ze Cheng Janine E Deakin Amber Alsop Katherine Thompson Patrick Kirby Anthony T Papenfuss Matthew J Wakefield Tsviya Olender Doron Lancet Gavin A Huttley Arian F A Smit Andrew Pask Peter Temple-Smith Mark A Batzer Jerilyn A Walker Miriam K Konkel Robert S Harris Camilla M Whittington Emily S W Wong Neil J Gemmell Emmanuel Buschiazzo Iris M Vargas Jentzsch Angelika Merkel Juergen Schmitz Anja Zemann Gennady Churakov Jan Ole Kriegs Juergen Brosius Elizabeth P Murchison Ravi Sachidanandam Carly Smith Gregory J Hannon Enkhjargal Tsend-Ayush Daniel McMillan Rosalind Attenborough Willem Rens Malcolm Ferguson-Smith Christophe M Lefèvre Julie A Sharp Kevin R Nicholas David A Ray Michael Kube Richard Reinhardt Thomas H Pringle James Taylor Russell C Jones Brett Nixon Jean-Louis Dacheux Hitoshi Niwa Yoko Sekita Xiaoqiu Huang Alexander Stark Pouya Kheradpour Manolis Kellis Paul Flicek Yuan Chen Caleb Webber Ross Hardison Joanne Nelson Kym Hallsworth-Pepin Kim Delehaunty Chris Markovic Pat Minx Yucheng Feng Colin Kremitzki Makedonka Mitreva Jarret Glasscock Todd Wylie Patricia Wohldmann Prathapan Thiru Michael N Nhan Craig S Pohl Scott M Smith Shunfeng Hou Mikhail Nefedov Pieter J de Jong Marilyn B Renfree Elaine R Mardis Richard K Wilson

Nature 2008 May;453(7192):175-83

Genome Sequencing Center, Washington University School of Medicine, Campus Box 8501, 4444 Forest Park Avenue, St Louis, Missouri 63108, USA.

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http://dx.doi.org/10.1038/nature06936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2803040PMC
May 2008

Conservation of small RNA pathways in platypus.

Genome Res 2008 Jun 7;18(6):995-1004. Epub 2008 May 7.

Watson School of Biological Sciences, Howard Hughes Medical Institute, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gr.073056.107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2413167PMC
June 2008

Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes.

Nature 2008 May 10;453(7194):534-8. Epub 2008 Apr 10.

Cold Spring Harbor Laboratory, Watson School of Biological Sciences and Howard Hughes Medical Institute, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1038/nature06904DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2981145PMC
May 2008

Targeted deletion of Dicer in the heart leads to dilated cardiomyopathy and heart failure.

Proc Natl Acad Sci U S A 2008 Feb 6;105(6):2111-6. Epub 2008 Feb 6.

Carolina Cardiovascular Biology Center, Department of Cell and Developmental Biology, University of North Carolina, Chapel Hill, NC 27599, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0710228105
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http://dx.doi.org/10.1073/pnas.0710228105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2542870PMC
February 2008

Critical roles for Dicer in the female germline.

Genes Dev 2007 Mar;21(6):682-93

Cold Spring Harbor Laboratory, Watson School of Biological Sciences and Howard Hughes Medical Institute, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1101/gad.1521307DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1820942PMC
March 2007

The miRNA-processing enzyme dicer is essential for the morphogenesis and maintenance of hair follicles.

Curr Biol 2006 May 11;16(10):1041-9. Epub 2006 May 11.

Departments of Dermatology and Cell and Developmental Biology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1016/j.cub.2006.04.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2996092PMC
May 2006

Characterization of Dicer-deficient murine embryonic stem cells.

Proc Natl Acad Sci U S A 2005 Aug 12;102(34):12135-40. Epub 2005 Aug 12.

Watson School of Biological Sciences, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0505479102
Publisher Site
http://dx.doi.org/10.1073/pnas.0505479102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1185572PMC
August 2005

miRNAs on the move: miRNA biogenesis and the RNAi machinery.

Curr Opin Cell Biol 2004 Jun;16(3):223-9

Cold Spring Harbor Laboratory, Watson School of Biological Sciences, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.

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http://dx.doi.org/10.1016/j.ceb.2004.04.003DOI Listing
June 2004

Dicer is essential for mouse development.

Nat Genet 2003 Nov 5;35(3):215-7. Epub 2003 Oct 5.

Cold Spring Harbor Laboratory, Watson School of Biological Sciences, 1 Bungtown Road, Cold Spring Harbor, New York 11724, USA.

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http://dx.doi.org/10.1038/ng1253DOI Listing
November 2003